This page tests the the Notung applet.
Click on a link below to view a tree. The first time you click on a
link, it may take a while to load. Subsequent times should load more
quickly. Feedback is welcome!
Test close bug
old version tree
PPOD trees
Each of these trees opens in homolog mode, with annotations, and an accompanying pruned species tree. These links force a redownload of the applet.
ORTHOMCL7, with 290 leaves,
new png image,
old png image
ORTHOMCL101, with 69 leaves,
new png image,
old png image
ORTHOMCL19154, with 3 leaves,
new png image,
old png image
Trees suggested by Mike:
ACT1,
png image
ALG5,
png image
CCC2,
png image
CYB5,
png image
MET3,
png image
RPB2,
png image
TUB1/3,
png image
HSP70 tree, a good example with weak edges, for the new Ortholog/Paralog inference algorithm.
Older Example
Click here to examine homologs in an example gene tree in Notung (does not force reload).
Click here to examine homologs in an example gene tree in Notung (forces reload).