------------------------------------------------------------------------------------------------------------------------- Will print the top 5 alignments (based on backbone shifts) for each pairing of chains, as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: score1 [score2] pairings L2ERR {Xbad/Xsig:Xtot} Breaks (score2 is the score from protein2's perspective, not the minimum of the two perspectives as in some earlier printouts.) Recall that "SIMILARITY" refers to similarities over all alignments not just the top ones. ------------------------------------------------------------------------------------------------------------------------- [2595, 25]: Comparing 1isp_A and 1a28_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 16 (12 H + 4 S) secondary structure elements in 1a28_A, of which 14 satisfy the size requirements. 3.13385 [ 3.70938] ((5 . 1) (7 . 2) (14 . 5) (15 . 9)) 10.675 {1/4:6} B:0 6.06564 [ 6.16710] ((2 . 4) (5 . 5) (7 . 9) (15 . 13)) 13.165 {3/5:6} B:0 7.53392 [ 7.58764] ((5 . 5) (7 . 9) (14 . 12) (15 . 13)) 13.034 {3/4:6} B:0 SIMILARITY (1/min{score1}): 0.3191 [and 1/min{score2}: 0.2696] [2595, 41]: Comparing 1isp_A and 1a4i_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 21 (12 H + 9 S) secondary structure elements in 1a4i_A, of which 7 satisfy the size requirements. 1.83350 [ 1.16732] ((1 . 3) (2 . 4) (4 . 5) (5 . 6) (6 . 7) (7 . 8)) 4.067 {0/2:15} B:0 2.20008 [ 1.40031] ((1 . 3) (2 . 4) (4 . 5) (5 . 6) (6 . 7)) 3.869 {0/1:10} B:0 2.75002 [ 1.75010] ((1 . 3) (2 . 4) (4 . 5) (6 . 7)) 3.408 {0/1:6} B:0 2.75011 [ 1.75041] ((5 . 2) (7 . 4) (9 . 5) (14 . 8)) 4.908 {0/3:6} B:0 2.75024 [ 1.75094] ((1 . 3) (2 . 4) (4 . 5) (5 . 8)) 6.024 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.5454 [and 1/min{score2}: 0.8569] [2595, 51]: Comparing 1isp_A and 1a6c_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 41 (7 H + 34 S) secondary structure elements in 1a6c_A, of which 11 satisfy the size requirements. 2.75020 [ 2.75020] ((6 . 1) (9 . 6) (11 . 7) (13 . 10)) 5.733 {0/1:6} B:0 2.75106 [ 2.75106] ((1 . 2) (4 . 7) (5 . 9) (11 . 14)) 8.718 {0/1:6} B:0 2.75143 [ 2.75143] ((1 . 1) (2 . 3) (7 . 9) (11 . 13)) 9.395 {0/4:6} B:0 2.75209 [ 2.75209] ((4 . 2) (9 . 7) (11 . 11) (13 . 13)) 10.330 {0/2:6} B:0 2.75254 [ 2.75254] ((4 . 2) (6 . 7) (11 . 11) (13 . 13)) 10.852 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.3990 [and 1/min{score2}: 0.3990] [2595, 62]: Comparing 1isp_A and 1a79_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 17 (6 H + 11 S) secondary structure elements in 1a79_A, of which 7 satisfy the size requirements. 2.75072 [ 1.75279] ((5 . 9) (6 . 12) (9 . 13) (11 . 16)) 7.920 {0/2:6} B:0 2.75118 [ 1.75456] ((5 . 9) (6 . 10) (9 . 13) (11 . 16)) 8.957 {0/3:6} B:0 3.66630 [ 3.39512] ((5 . 9) (6 . 13) (9 . 16) (11 . 17)) 6.823 {1/3:6} B:0 2.20064 [ 1.40249] ((1 . 10) (2 . 9) (4 . 13) (5 . 15) (6 . 16)) 6.512 {0/4:10} B:1 2.75065 [ 1.75252] ((5 . 9) (6 . 13) (9 . 12) (11 . 16)) 7.719 {0/2:6} B:1 SIMILARITY (1/min{score1}): 0.4544 [and 1/min{score2}: 0.7130] [2595, 64]: Comparing 1isp_A and 1a7s, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 16 (3 H + 13 S) secondary structure elements in 1a7s, of which 13 satisfy the size requirements. 2.75101 [ 3.25061] ((1 . 4) (4 . 7) (11 . 12) (15 . 16)) 8.622 {0/3:6} B:0 2.75110 [ 3.25067] ((1 . 2) (4 . 4) (6 . 7) (13 . 12)) 8.797 {0/4:6} B:0 2.75151 [ 3.25091] ((1 . 2) (4 . 4) (6 . 7) (11 . 9)) 9.526 {0/3:6} B:0 3.66623 [ 3.91549] ((1 . 9) (4 . 10) (6 . 13) (9 . 15)) 5.955 {1/3:6} B:0 6.71448 [ 6.75894] ((1 . 4) (4 . 7) (13 . 13) (15 . 16)) 8.620 {2/3:6} B:0 SIMILARITY (1/min{score1}): 0.3635 [and 1/min{score2}: 0.3076] [2595, 77]: Comparing 1isp_A and 1a8r_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 17 (10 H + 7 S) secondary structure elements in 1a8r_A, of which 13 satisfy the size requirements. 2.75036 [ 3.25022] ((1 . 8) (2 . 10) (6 . 15) (7 . 16)) 6.646 {0/5:6} B:0 2.75074 [ 3.25045] ((1 . 7) (4 . 9) (5 . 12) (6 . 13)) 7.976 {0/0:6} B:0 2.75353 [ 3.25214] ((5 . 1) (11 . 6) (13 . 8) (15 . 10)) 11.783 {0/3:6} B:0 2.92603 [ 3.36146] ((1 . 9) (2 . 10) (6 . 15) (7 . 16)) 9.232 {1/5:6} B:0 4.20712 [ 4.37887] ((2 . 1) (5 . 2) (11 . 8) (14 . 10)) 8.869 {2/5:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.3077] [2595, 91]: Comparing 1isp_A and 1aa6, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 60 (32 H + 28 S) secondary structure elements in 1aa6, of which 35 satisfy the size requirements. 1.79040 [ 5.00833] ((1 . 10) (2 . 11) (5 . 36) (6 . 37) (9 . 40) (11 . 42) (14 . 46)) 5.359 {1/7:21} B:0 1.83520 [ 5.83339] ((6 . 10) (7 . 11) (9 . 37) (11 . 40) (13 . 42) (15 . 46)) 7.412 {0/1:15} B:0 2.20075 [ 7.00002] ((7 . 11) (9 . 37) (11 . 40) (13 . 42) (15 . 46)) 6.765 {0/0:10} B:0 2.36497 [ 7.00572] ((5 . 14) (9 . 16) (11 . 21) (14 . 22) (15 . 23)) 9.802 {1/6:10} B:0 2.50698 [ 7.01169] ((5 . 14) (6 . 16) (7 . 18) (9 . 19) (11 . 21)) 8.370 {1/5:10} B:0 SIMILARITY (1/min{score1}): 0.8052 [and 1/min{score2}: 0.2696] [2595, 96]: Comparing 1isp_A and 1aba, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 7 (3 H + 4 S) secondary structure elements in 1aba, of which 7 satisfy the size requirements. 2.75001 [ 1.75003] ((1 . 1) (2 . 2) (4 . 3) (9 . 6)) 2.617 {0/3:6} B:0 2.75002 [ 1.75008] ((1 . 1) (2 . 2) (4 . 3) (6 . 6)) 3.250 {0/2:6} B:0 2.75085 [ 1.75329] ((6 . 1) (7 . 2) (11 . 3) (15 . 7)) 8.249 {0/0:6} B:0 2.75086 [ 1.75331] ((6 . 1) (7 . 2) (9 . 3) (14 . 7)) 8.265 {0/0:6} B:0 5.01218 [ 5.00202] ((1 . 1) (2 . 2) (4 . 3) (5 . 4) (6 . 5) (9 . 6) (15 . 7)) 5.413 {4/8:21} B:0 SIMILARITY (1/min{score1}): 0.4543 [and 1/min{score2}: 0.7121] [2595, 129]: Comparing 1isp_A and 1ahs_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 12 (1 H + 11 S) secondary structure elements in 1ahs_A, of which 9 satisfy the size requirements. 2.75066 [ 2.25121] ((1 . 1) (4 . 3) (6 . 8) (11 . 12)) 7.749 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.3635 [and 1/min{score2}: 0.4442] [2595, 136]: Comparing 1isp_A and 1aiu, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 9 (4 H + 5 S) secondary structure elements in 1aiu, of which 8 satisfy the size requirements. 3.13287 [ 2.72501] ((2 . 2) (4 . 3) (5 . 6) (9 . 8)) 8.455 {1/4:6} B:0 3.66676 [ 3.43721] ((5 . 4) (6 . 5) (7 . 6) (11 . 8)) 9.486 {1/3:6} B:0 5.11079 [ 5.03184] ((6 . 3) (7 . 4) (9 . 5) (14 . 9)) 8.285 {1/2:6} B:0 5.11080 [ 5.03185] ((7 . 2) (11 . 5) (13 . 8) (14 . 9)) 8.454 {1/2:6} B:0 10.01427 [10.00400] ((1 . 3) (2 . 4) (4 . 5) (6 . 7)) 6.350 {2/2:6} B:0 SIMILARITY (1/min{score1}): 0.4542 [and 1/min{score2}: 0.6232] [2595, 147]: Comparing 1isp_A and 1all_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 9 (9 H + 0 S) secondary structure elements in 1all_A, of which 8 satisfy the size requirements. NO SIMILARITY! [2595, 150]: Comparing 1isp_A and 1aln, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 25 (15 H + 10 S) secondary structure elements in 1aln, of which 8 satisfy the size requirements. 2.20014 [ 1.60037] ((4 . 20) (5 . 21) (6 . 23) (7 . 24) (9 . 25)) 4.452 {0/6:10} B:0 2.20089 [ 1.60231] ((1 . 20) (2 . 21) (4 . 23) (5 . 24) (6 . 25)) 7.063 {0/3:10} B:0 2.50587 [ 2.17935] ((1 . 19) (4 . 20) (5 . 21) (6 . 23) (9 . 25)) 4.213 {1/5:10} B:0 2.75160 [ 2.00416] ((7 . 17) (11 . 20) (13 . 23) (15 . 24)) 9.671 {0/0:6} B:0 6.06519 [ 6.01850] ((2 . 18) (5 . 21) (6 . 23) (9 . 25)) 7.953 {3/5:6} B:0 SIMILARITY (1/min{score1}): 0.4545 [and 1/min{score2}: 0.6249] [2595, 153]: Comparing 1isp_A and 1aly, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 12 (1 H + 11 S) secondary structure elements in 1aly, of which 9 satisfy the size requirements. 2.75027 [ 2.25050] ((6 . 1) (9 . 4) (11 . 6) (13 . 8)) 6.208 {0/1:6} B:0 2.75034 [ 2.25063] ((6 . 1) (9 . 4) (11 . 7) (13 . 8)) 6.580 {0/1:6} B:0 2.75036 [ 2.25067] ((6 . 7) (9 . 8) (11 . 10) (13 . 12)) 6.678 {0/1:6} B:0 2.75047 [ 2.25085] ((4 . 1) (6 . 4) (9 . 6) (11 . 8)) 7.098 {0/1:6} B:0 2.75065 [ 2.25118] ((1 . 5) (4 . 7) (6 . 9) (9 . 12)) 7.705 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.4544 [and 1/min{score2}: 0.5551] [2595, 155]: Comparing 1isp_A and 1am7_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 8 (6 H + 2 S) secondary structure elements in 1am7_A, of which 8 satisfy the size requirements. NO SIMILARITY! [2595, 157]: Comparing 1isp_A and 1amf, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 23 (12 H + 11 S) secondary structure elements in 1amf, of which 20 satisfy the size requirements. 2.20035 [ 4.00006] ((1 . 1) (2 . 2) (4 . 5) (5 . 6) (6 . 8)) 5.601 {0/3:10} B:0 2.36406 [ 4.03016] ((4 . 1) (5 . 2) (6 . 5) (7 . 6) (9 . 8)) 8.826 {1/6:10} B:0 2.75018 [ 5.00003] ((1 . 1) (2 . 2) (4 . 3) (6 . 8)) 5.583 {0/2:6} B:0 2.75149 [ 5.00025] ((5 . 12) (9 . 16) (11 . 20) (14 . 22)) 9.495 {0/2:6} B:0 2.75165 [ 5.00027] ((5 . 2) (7 . 4) (9 . 5) (13 . 9)) 9.740 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.4545 [and 1/min{score2}: 0.3237] [2595, 161]: Comparing 1isp_A and 1an8, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 22 (6 H + 16 S) secondary structure elements in 1an8, of which 9 satisfy the size requirements. NO SIMILARITY! [2595, 162]: Comparing 1isp_A and 1an8, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 22 (6 H + 16 S) secondary structure elements in 1an8, of which 8 satisfy the size requirements. 2.75070 [ 2.00183] ((9 . 12) (11 . 17) (13 . 18) (15 . 19)) 7.868 {0/0:6} B:0 2.75123 [ 2.00319] ((6 . 12) (9 . 15) (13 . 18) (15 . 19)) 9.049 {0/1:6} B:0 3.66686 [ 3.43733] ((6 . 12) (9 . 15) (13 . 18) (14 . 19)) 9.845 {1/3:6} B:0 5.02264 [ 5.00651] ((2 . 16) (6 . 22) (9 . 15) (11 . 17) (13 . 18) (15 . 19)) 9.008 {3/6:15} B:1 2.97145 [ 2.89069] ((1 . 17) (4 . 18) (5 . 19) (6 . 22) (7 . 16) (11 . 12)) 6.334 {2/7:15} B:2 SIMILARITY (1/min{score1}): 0.3635 [and 1/min{score2}: 0.4995] [2595, 169]: Comparing 1isp_A and 1aoh_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 12 (1 H + 11 S) secondary structure elements in 1aoh_A, of which 11 satisfy the size requirements. 2.75027 [ 2.75027] ((1 . 4) (4 . 7) (6 . 9) (11 . 12)) 6.187 {0/3:6} B:0 2.75043 [ 2.75043] ((1 . 4) (4 . 7) (6 . 9) (9 . 11)) 6.975 {0/3:6} B:0 2.75111 [ 2.75111] ((6 . 5) (9 . 8) (11 . 9) (13 . 10)) 8.827 {0/1:6} B:0 2.75125 [ 2.75125] ((6 . 5) (9 . 7) (11 . 9) (13 . 10)) 9.087 {0/1:6} B:0 2.75220 [ 2.75220] ((6 . 4) (9 . 5) (11 . 8) (13 . 10)) 10.474 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.3636] [2595, 177]: Comparing 1isp_A and 1aoz_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 43 (11 H + 32 S) secondary structure elements in 1aoz_A, of which 9 satisfy the size requirements. 2.75040 [ 2.25074] ((1 . 3) (4 . 5) (6 . 8) (9 . 10)) 6.851 {0/1:6} B:0 2.75153 [ 2.25278] ((6 . 3) (9 . 5) (11 . 7) (13 . 10)) 9.553 {0/0:6} B:0 6.71456 [ 6.68835] ((1 . 3) (4 . 5) (7 . 9) (9 . 10)) 10.560 {2/3:6} B:0 10.01431 [10.00644] ((6 . 3) (9 . 5) (11 . 7) (13 . 8)) 10.292 {1/1:6} B:0 2.50609 [ 2.26924] ((1 . 5) (4 . 7) (6 . 8) (9 . 10) (13 . 3)) 5.942 {1/5:10} B:1 SIMILARITY (1/min{score1}): 0.3990 [and 1/min{score2}: 0.4443] [2595, 191]: Comparing 1isp_A and 1aqz_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 9 (2 H + 7 S) secondary structure elements in 1aqz_A, of which 8 satisfy the size requirements. 2.75099 [ 2.00258] ((1 . 1) (2 . 3) (9 . 6) (11 . 8)) 8.583 {0/4:6} B:0 3.13421 [ 2.72704] ((1 . 2) (2 . 3) (4 . 4) (11 . 9)) 11.234 {1/4:6} B:0 3.66648 [ 3.43687] ((4 . 1) (6 . 2) (11 . 6) (13 . 7)) 8.160 {1/3:6} B:0 5.11089 [ 5.03195] ((4 . 2) (5 . 3) (9 . 6) (11 . 7)) 9.561 {2/4:6} B:0 5.57206 [ 5.56027] ((1 . 1) (2 . 3) (4 . 2) (6 . 8) (9 . 9) (13 . 4)) 8.363 {5/9:15} B:2 SIMILARITY (1/min{score1}): 0.3635 [and 1/min{score2}: 0.4994] [2595, 198]: Comparing 1isp_A and 1at0, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 17 (2 H + 15 S) secondary structure elements in 1at0, of which 15 satisfy the size requirements. NO SIMILARITY! [2595, 207]: Comparing 1isp_A and 1aua, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 23 (18 H + 5 S) secondary structure elements in 1aua, of which 13 satisfy the size requirements. 2.20014 [ 2.60009] ((4 . 8) (5 . 11) (6 . 13) (11 . 15) (13 . 18)) 4.459 {0/5:10} B:0 2.75036 [ 3.25022] ((5 . 10) (9 . 13) (11 . 15) (13 . 18)) 6.655 {0/3:6} B:0 2.75055 [ 3.25033] ((7 . 12) (9 . 13) (11 . 15) (15 . 19)) 7.389 {0/0:6} B:0 2.75061 [ 3.25037] ((1 . 13) (2 . 14) (4 . 15) (5 . 16)) 7.600 {0/1:6} B:0 2.75067 [ 3.25041] ((5 . 12) (6 . 13) (7 . 14) (13 . 18)) 7.787 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.6361 [and 1/min{score2}: 0.5383] [2595, 233]: Comparing 1isp_A and 1axi_B, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 16 (2 H + 14 S) secondary structure elements in 1axi_B, of which 6 satisfy the size requirements. 2.75066 [ 1.50402] ((4 . 1) (6 . 3) (9 . 5) (11 . 8)) 7.732 {0/2:6} B:0 2.75086 [ 1.50526] ((1 . 1) (4 . 3) (6 . 7) (9 . 8)) 8.269 {0/2:6} B:0 2.75090 [ 1.50554] ((6 . 1) (9 . 3) (11 . 5) (13 . 8)) 8.380 {0/1:6} B:0 3.66626 [ 3.36716] ((4 . 1) (6 . 3) (9 . 7) (11 . 8)) 6.368 {1/3:6} B:0 10.01428 [10.00128] ((6 . 1) (9 . 2) (11 . 5) (13 . 7)) 8.051 {1/1:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.6664] [2595, 259]: Comparing 1isp_A and 1b0b, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 8 (8 H + 0 S) secondary structure elements in 1b0b, of which 7 satisfy the size requirements. NO SIMILARITY! [2595, 293]: Comparing 1isp_A and 1b5l, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 6 (6 H + 0 S) secondary structure elements in 1b5l, of which 6 satisfy the size requirements. NO SIMILARITY! [2595, 300]: Comparing 1isp_A and 1b6a, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 28 (9 H + 19 S) secondary structure elements in 1b6a, of which 16 satisfy the size requirements. 2.20304 [ 3.20099] ((2 . 5) (4 . 7) (6 . 10) (7 . 11) (11 . 13)) 9.599 {0/5:10} B:0 2.75179 [ 4.00058] ((2 . 5) (4 . 6) (7 . 11) (11 . 13)) 9.947 {0/4:6} B:0 2.75215 [ 4.00070] ((2 . 11) (4 . 13) (6 . 17) (9 . 18)) 10.410 {0/4:6} B:0 2.75473 [ 4.00154] ((4 . 2) (5 . 3) (7 . 4) (13 . 9)) 12.680 {0/4:6} B:0 2.76068 [ 4.00349] ((1 . 6) (7 . 11) (9 . 13) (13 . 18)) 15.557 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.4539 [and 1/min{score2}: 0.3212] [2595, 305]: Comparing 1isp_A and 1b6r_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 31 (15 H + 16 S) secondary structure elements in 1b6r_A, of which 16 satisfy the size requirements. 2.75604 [ 4.00197] ((5 . 13) (6 . 15) (9 . 17) (13 . 21)) 13.482 {0/3:6} B:0 3.13606 [ 4.14621] ((5 . 10) (6 . 11) (11 . 17) (14 . 20)) 13.250 {1/4:6} B:0 4.20690 [ 4.75689] ((2 . 8) (5 . 10) (6 . 11) (7 . 13)) 6.549 {2/5:6} B:0 5.11087 [ 5.44827] ((5 . 14) (9 . 21) (11 . 22) (14 . 25)) 9.341 {2/4:6} B:0 5.11087 [ 5.44827] ((5 . 14) (11 . 21) (13 . 22) (14 . 25)) 9.360 {2/4:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.2573] [2595, 307]: Comparing 1isp_A and 1b74_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 22 (12 H + 10 S) secondary structure elements in 1b74_A, of which 8 satisfy the size requirements. 1.57153 [ 1.14312] ((1 . 1) (2 . 2) (4 . 3) (5 . 6) (6 . 7) (7 . 8) (9 . 9)) 3.198 {0/12:21} B:0 2.20168 [ 1.60436] ((1 . 3) (2 . 6) (4 . 7) (5 . 8) (6 . 9)) 8.282 {0/3:10} B:0 2.75002 [ 2.00005] ((1 . 1) (2 . 2) (5 . 6) (6 . 9)) 3.268 {0/3:6} B:0 2.75042 [ 2.00108] ((1 . 7) (2 . 8) (4 . 9) (5 . 10)) 6.906 {0/1:6} B:0 2.75064 [ 2.00167] ((5 . 2) (6 . 3) (9 . 7) (11 . 9)) 7.690 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.6363 [and 1/min{score2}: 0.8748] [2595, 315]: Comparing 1isp_A and 1b8a_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 35 (15 H + 20 S) secondary structure elements in 1b8a_A, of which 9 satisfy the size requirements. NO SIMILARITY! [2595, 317]: Comparing 1isp_A and 1b8d_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 10 (10 H + 0 S) secondary structure elements in 1b8d_A, of which 9 satisfy the size requirements. NO SIMILARITY! [2595, 329]: Comparing 1isp_A and 1b9o_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 10 (7 H + 3 S) secondary structure elements in 1b9o_A, of which 7 satisfy the size requirements. NO SIMILARITY! [2595, 340]: Comparing 1isp_A and 1bb9, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 9 (4 H + 5 S) secondary structure elements in 1bb9, of which 6 satisfy the size requirements. NO SIMILARITY! [2595, 350]: Comparing 1isp_A and 1bd7_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 20 (6 H + 14 S) secondary structure elements in 1bd7_A, of which 17 satisfy the size requirements. 2.75099 [ 4.25027] ((6 . 11) (9 . 15) (11 . 18) (13 . 20)) 8.576 {0/0:6} B:0 2.75113 [ 4.25031] ((6 . 1) (9 . 4) (11 . 8) (13 . 10)) 8.866 {0/0:6} B:0 2.75133 [ 4.25036] ((9 . 2) (11 . 4) (13 . 7) (14 . 9)) 9.234 {0/3:6} B:0 2.75205 [ 4.25055] ((4 . 2) (9 . 10) (11 . 13) (13 . 15)) 10.279 {0/3:6} B:0 3.13243 [ 4.37194] ((2 . 9) (4 . 10) (9 . 16) (11 . 20)) 6.308 {1/4:6} B:0 SIMILARITY (1/min{score1}): 0.4544 [and 1/min{score2}: 0.2941] [2595, 351]: Comparing 1isp_A and 1bd8, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 10 (10 H + 0 S) secondary structure elements in 1bd8, of which 9 satisfy the size requirements. NO SIMILARITY! [2595, 360]: Comparing 1isp_A and 1beb_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 15 (5 H + 10 S) secondary structure elements in 1beb_A, of which 11 satisfy the size requirements. 2.75006 [ 2.75006] ((4 . 9) (6 . 12) (7 . 13) (9 . 14)) 4.178 {0/3:6} B:0 2.75043 [ 2.75043] ((1 . 5) (4 . 7) (9 . 12) (11 . 14)) 6.955 {0/4:6} B:0 2.75047 [ 2.75047] ((1 . 9) (4 . 12) (5 . 13) (6 . 14)) 7.128 {0/0:6} B:0 2.75066 [ 2.75066] ((4 . 5) (6 . 7) (11 . 12) (13 . 14)) 7.741 {0/4:6} B:0 2.75081 [ 2.75081] ((1 . 5) (4 . 7) (7 . 13) (11 . 14)) 8.154 {0/4:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.3636] [2595, 361]: Comparing 1isp_A and 1bed, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 13 (8 H + 5 S) secondary structure elements in 1bed, of which 12 satisfy the size requirements. 2.20037 [ 2.40028] ((2 . 3) (4 . 4) (5 . 5) (13 . 11) (15 . 13)) 5.662 {0/6:10} B:0 2.75013 [ 3.00010] ((4 . 2) (5 . 3) (6 . 4) (7 . 5)) 5.194 {0/2:6} B:0 2.75077 [ 3.00059] ((6 . 2) (7 . 3) (9 . 4) (15 . 8)) 8.055 {0/0:6} B:0 2.75089 [ 3.00068] ((6 . 2) (7 . 3) (9 . 4) (15 . 7)) 8.340 {0/0:6} B:0 2.75215 [ 3.00166] ((2 . 3) (5 . 5) (7 . 6) (15 . 13)) 10.408 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.4545 [and 1/min{score2}: 0.4166] [2595, 365]: Comparing 1isp_A and 1bf2, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 48 (24 H + 24 S) secondary structure elements in 1bf2, of which 7 satisfy the size requirements. 2.75026 [ 1.75103] ((1 . 3) (4 . 4) (5 . 7) (6 . 8)) 6.162 {0/2:6} B:0 2.75072 [ 1.75277] ((1 . 2) (4 . 4) (5 . 7) (6 . 8)) 7.906 {0/2:6} B:0 2.75079 [ 1.75306] ((1 . 1) (4 . 4) (5 . 7) (6 . 8)) 8.105 {0/2:6} B:0 6.71445 [ 6.67461] ((9 . 1) (11 . 3) (13 . 6) (14 . 7)) 7.537 {2/3:6} B:0 10.01428 [10.00236] ((6 . 1) (9 . 2) (11 . 6) (13 . 8)) 8.146 {1/1:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.5713] [2595, 367]: Comparing 1isp_A and 1bf2, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 48 (24 H + 24 S) secondary structure elements in 1bf2, of which 10 satisfy the size requirements. 2.75022 [ 2.50029] ((4 . 38) (6 . 42) (9 . 44) (11 . 47)) 5.866 {0/3:6} B:0 2.75047 [ 2.50063] ((1 . 38) (4 . 42) (6 . 44) (9 . 47)) 7.132 {0/3:6} B:0 2.75085 [ 2.50113] ((7 . 39) (9 . 40) (11 . 42) (13 . 44)) 8.252 {0/0:6} B:0 5.11076 [ 5.07647] ((1 . 38) (4 . 42) (6 . 44) (9 . 48)) 7.831 {1/2:6} B:0 5.11109 [ 5.07680] ((4 . 40) (5 . 41) (6 . 43) (11 . 48)) 11.092 {1/2:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.4000] [2595, 372]: Comparing 1isp_A and 1bfg, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 14 (4 H + 10 S) secondary structure elements in 1bfg, of which 10 satisfy the size requirements. NO SIMILARITY! [2595, 387]: Comparing 1isp_A and 1bhg_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 43 (13 H + 30 S) secondary structure elements in 1bhg_A, of which 9 satisfy the size requirements. 2.75027 [ 2.25050] ((1 . 7) (4 . 9) (6 . 12) (11 . 15)) 6.212 {0/2:6} B:0 2.75216 [ 2.25394] ((1 . 1) (5 . 6) (9 . 10) (11 . 12)) 10.424 {0/4:6} B:0 2.75237 [ 2.25431] ((4 . 1) (9 . 8) (11 . 10) (13 . 12)) 10.661 {0/3:6} B:0 2.75251 [ 2.25458] ((1 . 1) (6 . 8) (9 . 10) (11 . 12)) 10.821 {0/2:6} B:0 3.13338 [ 2.83758] ((2 . 6) (4 . 7) (6 . 9) (9 . 11)) 9.802 {1/4:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.4443] [2595, 405]: Comparing 1isp_A and 1bih_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 40 (4 H + 36 S) secondary structure elements in 1bih_A, of which 9 satisfy the size requirements. 2.75775 [ 2.26407] ((4 . 31) (6 . 33) (9 . 37) (11 . 39)) 14.351 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.3626 [and 1/min{score2}: 0.4417] [2595, 417]: Comparing 1isp_A and 1bkf, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 9 (3 H + 6 S) secondary structure elements in 1bkf, of which 7 satisfy the size requirements. 2.75181 [ 1.75700] ((1 . 1) (4 . 2) (6 . 7) (9 . 9)) 9.973 {0/2:6} B:0 3.66646 [ 3.39532] ((1 . 1) (5 . 6) (6 . 7) (9 . 9)) 8.022 {1/3:6} B:0 6.67620 [ 6.66825] ((1 . 1) (6 . 7) (7 . 6) (9 . 9) (11 . 2) (13 . 3)) 6.648 {4/6:15} B:2 7.51385 [ 7.50229] ((1 . 1) (6 . 7) (7 . 6) (9 . 9) (11 . 2)) 5.888 {3/4:10} B:2 2.81197 [ 2.55985] ((1 . 7) (6 . 9) (7 . 6) (9 . 5) (11 . 2)) 6.936 {1/4:10} B:3 SIMILARITY (1/min{score1}): 0.3634 [and 1/min{score2}: 0.5692] [2595, 420]: Comparing 1isp_A and 1bkz_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 13 (1 H + 12 S) secondary structure elements in 1bkz_A, of which 10 satisfy the size requirements. 2.20161 [ 2.00214] ((4 . 1) (6 . 3) (9 . 5) (11 . 8) (13 . 10)) 8.193 {0/3:10} B:0 2.75062 [ 2.50083] ((1 . 1) (4 . 3) (6 . 8) (11 . 13)) 7.629 {0/0:6} B:0 2.75079 [ 2.50105] ((1 . 3) (4 . 5) (6 . 10) (9 . 13)) 8.103 {0/1:6} B:0 2.75099 [ 2.50132] ((6 . 2) (9 . 4) (11 . 8) (13 . 9)) 8.581 {0/1:6} B:0 2.75009 [ 2.50012] ((6 . 12) (9 . 3) (11 . 4) (13 . 9)) 4.704 {0/1:6} B:1 SIMILARITY (1/min{score1}): 0.4542 [and 1/min{score2}: 0.4995] [2595, 433]: Comparing 1isp_A and 1bo4_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 10 (4 H + 6 S) secondary structure elements in 1bo4_A, of which 10 satisfy the size requirements. 2.75031 [ 2.50041] ((6 . 1) (7 . 2) (11 . 6) (15 . 8)) 6.399 {0/1:6} B:0 2.75033 [ 2.50044] ((4 . 5) (6 . 7) (7 . 8) (9 . 9)) 6.528 {0/3:6} B:0 2.75050 [ 2.50066] ((1 . 5) (4 . 7) (5 . 8) (6 . 9)) 7.216 {0/2:6} B:0 3.13330 [ 2.97426] ((5 . 2) (6 . 5) (11 . 7) (13 . 9)) 9.614 {1/4:6} B:0 5.11071 [ 5.07642] ((2 . 3) (4 . 5) (6 . 7) (9 . 9)) 6.678 {2/4:6} B:0 SIMILARITY (1/min{score1}): 0.4787 [and 1/min{score2}: 0.5043] [2595, 442]: Comparing 1isp_A and 1bou_B, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 22 (9 H + 13 S) secondary structure elements in 1bou_B, of which 20 satisfy the size requirements. 2.20033 [ 4.00006] ((2 . 11) (4 . 12) (5 . 13) (6 . 14) (7 . 15)) 5.523 {0/6:10} B:0 2.20388 [ 4.00065] ((1 . 12) (2 . 13) (4 . 14) (5 . 15) (9 . 19)) 10.205 {0/6:10} B:0 2.75018 [ 5.00003] ((2 . 11) (4 . 12) (5 . 13) (9 . 14)) 5.559 {0/3:6} B:0 2.75022 [ 5.00004] ((1 . 1) (6 . 4) (13 . 12) (15 . 13)) 5.895 {0/2:6} B:0 2.75040 [ 5.00007] ((1 . 1) (5 . 3) (13 . 12) (15 . 13)) 6.851 {0/4:6} B:0 SIMILARITY (1/min{score1}): 0.5941 [and 1/min{score2}: 0.4588] [2595, 460]: Comparing 1isp_A and 1btn, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 9 (2 H + 7 S) secondary structure elements in 1btn, of which 8 satisfy the size requirements. 10.01429 [10.00402] ((5 . 4) (6 . 6) (7 . 9) (9 . 8)) 8.331 {1/1:6} B:1 7.51385 [ 7.50389] ((1 . 1) (6 . 8) (7 . 9) (9 . 7) (11 . 6)) 5.772 {3/4:10} B:2 SIMILARITY (1/min{score1}): 0.1331 [and 1/min{score2}: 0.1333] [2595, 472]: Comparing 1isp_A and 1bup_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 34 (15 H + 19 S) secondary structure elements in 1bup_A, of which 12 satisfy the size requirements. 3.13285 [ 3.31070] ((4 . 20) (6 . 22) (14 . 28) (15 . 29)) 8.391 {1/4:6} B:0 5.11300 [ 5.15696] ((1 . 22) (5 . 24) (6 . 25) (11 . 31)) 16.933 {1/2:6} B:0 10.01456 [10.02048] ((1 . 22) (5 . 24) (6 . 25) (14 . 34)) 16.708 {1/1:6} B:0 5.11082 [ 5.15484] ((5 . 23) (13 . 31) (14 . 29) (15 . 33)) 8.776 {2/4:6} B:1 2.66401 [ 2.72413] ((1 . 20) (2 . 33) (4 . 31) (6 . 21) (9 . 22) (15 . 29)) 4.603 {2/8:15} B:2 SIMILARITY (1/min{score1}): 0.3754 [and 1/min{score2}: 0.3671] [2595, 491]: Comparing 1isp_A and 1byf_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 10 (3 H + 7 S) secondary structure elements in 1byf_A, of which 7 satisfy the size requirements. 5.11079 [ 5.01880] ((1 . 1) (2 . 2) (4 . 6) (9 . 9)) 8.345 {2/4:6} B:0 5.74547 [ 5.71948] ((1 . 6) (2 . 2) (5 . 5) (6 . 8) (9 . 9)) 7.261 {4/7:10} B:1 SIMILARITY (1/min{score1}): 0.1957 [and 1/min{score2}: 0.1993] [2595, 495]: Comparing 1isp_A and 1byr_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 13 (5 H + 8 S) secondary structure elements in 1byr_A, of which 12 satisfy the size requirements. 2.75033 [ 3.00026] ((1 . 5) (2 . 6) (4 . 7) (7 . 12)) 6.537 {0/3:6} B:0 2.75038 [ 3.00029] ((6 . 1) (7 . 2) (9 . 3) (11 . 5)) 6.746 {0/1:6} B:0 2.75045 [ 3.00035] ((1 . 3) (4 . 5) (6 . 7) (9 . 9)) 7.044 {0/0:6} B:0 2.75190 [ 3.00146] ((5 . 2) (11 . 8) (13 . 11) (15 . 12)) 10.089 {0/3:6} B:0 3.48146 [ 3.53785] ((5 . 2) (6 . 3) (7 . 4) (9 . 5) (11 . 7)) 6.378 {1/3:10} B:0 SIMILARITY (1/min{score1}): 0.4545 [and 1/min{score2}: 0.4292] [2595, 541]: Comparing 1isp_A and 1c8b_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 22 (12 H + 10 S) secondary structure elements in 1c8b_A, of which 18 satisfy the size requirements. 1.83372 [ 3.00009] ((1 . 7) (4 . 11) (5 . 13) (6 . 14) (11 . 17) (15 . 22)) 4.999 {0/4:15} B:0 2.20033 [ 3.60008] ((4 . 5) (5 . 6) (6 . 7) (7 . 9) (9 . 11)) 5.512 {0/7:10} B:0 2.20047 [ 3.60011] ((4 . 5) (5 . 6) (6 . 7) (7 . 9) (11 . 11)) 6.014 {0/7:10} B:0 2.20063 [ 3.60014] ((5 . 6) (6 . 7) (7 . 9) (9 . 11) (11 . 14)) 6.477 {0/5:10} B:0 2.20246 [ 3.60056] ((1 . 2) (4 . 5) (5 . 6) (7 . 9) (11 . 11)) 9.111 {0/6:10} B:0 SIMILARITY (1/min{score1}): 0.7169 [and 1/min{score2}: 0.4435] [2595, 543]: Comparing 1isp_A and 1c8n_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 16 (6 H + 10 S) secondary structure elements in 1c8n_A, of which 14 satisfy the size requirements. 2.75061 [ 3.50030] ((4 . 1) (6 . 2) (9 . 5) (11 . 8)) 7.592 {0/2:6} B:0 2.75104 [ 3.50050] ((6 . 1) (7 . 3) (11 . 6) (14 . 9)) 8.677 {0/3:6} B:0 2.75149 [ 3.50072] ((4 . 2) (5 . 3) (9 . 6) (11 . 10)) 9.490 {0/2:6} B:0 2.75196 [ 3.50095] ((5 . 3) (6 . 4) (9 . 6) (13 . 10)) 10.170 {0/2:6} B:0 2.75293 [ 3.50142] ((1 . 1) (7 . 7) (9 . 8) (13 . 15)) 11.251 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.2857] [2595, 553]: Comparing 1isp_A and 1cb8_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 57 (22 H + 35 S) secondary structure elements in 1cb8_A, of which 15 satisfy the size requirements. NO SIMILARITY! [2595, 561]: Comparing 1isp_A and 1cc8_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 6 (2 H + 4 S) secondary structure elements in 1cc8_A, of which 6 satisfy the size requirements. 5.11091 [ 5.01036] ((4 . 1) (5 . 2) (6 . 3) (7 . 5)) 9.717 {1/2:6} B:0 5.11094 [ 5.01040] ((1 . 1) (2 . 2) (4 . 4) (5 . 5)) 10.007 {1/2:6} B:0 6.71447 [ 6.67100] ((2 . 2) (4 . 4) (5 . 5) (6 . 6)) 8.497 {2/3:6} B:0 10.01431 [10.00131] ((1 . 3) (2 . 2) (4 . 4) (5 . 5)) 10.262 {1/1:6} B:1 SIMILARITY (1/min{score1}): 0.1957 [and 1/min{score2}: 0.1996] [2595, 584]: Comparing 1isp_A and 1cg2_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 33 (12 H + 21 S) secondary structure elements in 1cg2_A, of which 19 satisfy the size requirements. 2.20064 [ 3.80012] ((2 . 2) (4 . 3) (6 . 5) (11 . 10) (13 . 13)) 6.502 {0/5:10} B:0 2.75105 [ 4.75020] ((4 . 4) (7 . 9) (9 . 10) (13 . 15)) 8.697 {0/1:6} B:0 2.75307 [ 4.75060] ((2 . 6) (5 . 9) (6 . 10) (9 . 13)) 11.383 {0/4:6} B:0 2.75602 [ 4.75117] ((1 . 3) (5 . 6) (7 . 9) (9 . 10)) 13.469 {0/3:6} B:0 3.13228 [ 4.83862] ((2 . 9) (4 . 10) (5 . 12) (6 . 13)) 4.289 {1/4:6} B:0 SIMILARITY (1/min{score1}): 0.6796 [and 1/min{score2}: 0.4601] [2595, 587]: Comparing 1isp_A and 1cgh_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 17 (3 H + 14 S) secondary structure elements in 1cgh_A, of which 15 satisfy the size requirements. 2.75054 [ 3.75021] ((1 . 2) (4 . 4) (6 . 8) (13 . 13)) 7.361 {0/4:6} B:0 2.75071 [ 3.75028] ((1 . 4) (4 . 7) (11 . 13) (15 . 17)) 7.893 {0/4:6} B:0 2.75085 [ 3.75034] ((1 . 4) (4 . 8) (11 . 13) (15 . 17)) 8.263 {0/4:6} B:0 2.75126 [ 3.75050] ((1 . 2) (4 . 4) (6 . 8) (11 . 10)) 9.114 {0/3:6} B:0 3.66656 [ 4.23376] ((1 . 4) (11 . 13) (13 . 14) (15 . 17)) 8.602 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.2667] [2595, 609]: Comparing 1isp_A and 1cjc_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 40 (21 H + 19 S) secondary structure elements in 1cjc_A, of which 14 satisfy the size requirements. 2.20041 [ 2.80020] ((1 . 1) (2 . 2) (4 . 3) (6 . 6) (9 . 8)) 5.818 {0/2:10} B:0 2.20186 [ 2.80090] ((4 . 1) (5 . 2) (6 . 3) (9 . 6) (11 . 8)) 8.493 {0/2:10} B:0 2.75008 [ 3.50004] ((1 . 3) (4 . 6) (5 . 7) (6 . 8)) 4.629 {0/2:6} B:0 5.11069 [ 5.27639] ((4 . 1) (5 . 2) (7 . 5) (9 . 6)) 5.996 {1/2:6} B:0 5.11080 [ 5.27649] ((1 . 1) (2 . 2) (5 . 5) (6 . 8)) 8.495 {1/2:6} B:0 SIMILARITY (1/min{score1}): 0.7757 [and 1/min{score2}: 0.6291] [2595, 619]: Comparing 1isp_A and 1ckm_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 27 (7 H + 20 S) secondary structure elements in 1ckm_A, of which 18 satisfy the size requirements. 2.75126 [ 4.50029] ((5 . 10) (7 . 14) (9 . 15) (13 . 19)) 9.101 {0/3:6} B:0 2.75135 [ 4.50031] ((4 . 9) (6 . 12) (9 . 15) (14 . 17)) 9.267 {0/3:6} B:0 2.75215 [ 4.50049] ((1 . 2) (2 . 3) (11 . 12) (14 . 14)) 10.409 {0/5:6} B:0 2.92610 [ 4.54358] ((2 . 3) (9 . 9) (11 . 12) (14 . 14)) 9.364 {1/5:6} B:0 3.13362 [ 4.60398] ((1 . 2) (4 . 4) (9 . 11) (11 . 12)) 10.284 {1/4:6} B:0 SIMILARITY (1/min{score1}): 0.3635 [and 1/min{score2}: 0.2222] [2595, 624]: Comparing 1isp_A and 1cl1_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 27 (16 H + 11 S) secondary structure elements in 1cl1_A, of which 27 satisfy the size requirements. 1.83362 [ 4.50002] ((1 . 7) (2 . 8) (4 . 11) (5 . 12) (6 . 13) (9 . 15)) 4.622 {0/5:15} B:0 1.83371 [ 4.50003] ((2 . 6) (4 . 7) (5 . 10) (6 . 11) (9 . 13) (11 . 15)) 4.980 {0/6:15} B:0 1.83379 [ 4.50003] ((2 . 6) (4 . 9) (5 . 10) (6 . 11) (9 . 13) (11 . 15)) 5.214 {0/7:15} B:0 2.20006 [ 5.40000] ((1 . 7) (2 . 8) (4 . 9) (5 . 10) (6 . 13)) 3.625 {0/3:10} B:0 2.20018 [ 5.40001] ((1 . 7) (2 . 8) (5 . 10) (6 . 13) (9 . 15)) 4.733 {0/5:10} B:0 SIMILARITY (1/min{score1}): 0.8169 [and 1/min{score2}: 0.3433] [2595, 635]: Comparing 1isp_A and 1cmx_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 18 (9 H + 9 S) secondary structure elements in 1cmx_A, of which 13 satisfy the size requirements. 2.20217 [ 2.60132] ((2 . 2) (4 . 3) (5 . 4) (6 . 5) (7 . 7)) 8.826 {0/7:10} B:0 2.75036 [ 3.25022] ((1 . 3) (2 . 4) (4 . 5) (5 . 7)) 6.659 {0/2:6} B:0 2.75049 [ 3.25030] ((2 . 2) (5 . 4) (6 . 5) (14 . 12)) 7.188 {0/4:6} B:0 2.75134 [ 3.25081] ((2 . 12) (4 . 13) (7 . 17) (9 . 18)) 9.247 {0/3:6} B:0 2.75151 [ 3.25091] ((5 . 11) (6 . 13) (11 . 15) (13 . 18)) 9.522 {0/4:6} B:0 SIMILARITY (1/min{score1}): 0.4541 [and 1/min{score2}: 0.3844] [2595, 672]: Comparing 1isp_A and 1cs8_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 26 (13 H + 13 S) secondary structure elements in 1cs8_A, of which 20 satisfy the size requirements. 2.75056 [ 5.00009] ((2 . 8) (5 . 12) (9 . 16) (13 . 22)) 7.436 {0/3:6} B:0 3.13241 [ 5.07640] ((1 . 18) (2 . 19) (6 . 24) (7 . 25)) 6.074 {1/4:6} B:0 3.13255 [ 5.07643] ((2 . 7) (5 . 8) (7 . 12) (11 . 16)) 7.078 {1/4:6} B:0 3.13355 [ 5.07667] ((2 . 7) (5 . 8) (11 . 15) (14 . 17)) 10.146 {1/4:6} B:0 5.11167 [ 5.94668] ((2 . 1) (5 . 2) (7 . 4) (14 . 9)) 13.717 {2/4:6} B:0 SIMILARITY (1/min{score1}): 0.4788 [and 1/min{score2}: 0.2955] [2595, 678]: Comparing 1isp_A and 1ct9_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 43 (26 H + 17 S) secondary structure elements in 1ct9_A, of which 22 satisfy the size requirements. 1.83387 [ 3.66673] ((4 . 22) (5 . 23) (6 . 24) (7 . 25) (9 . 26) (15 . 28)) 5.422 {0/5:15} B:0 2.20004 [ 4.40000] ((4 . 22) (5 . 23) (6 . 24) (7 . 25) (9 . 26)) 3.235 {0/4:10} B:0 2.20021 [ 4.40003] ((1 . 24) (2 . 25) (4 . 26) (5 . 28) (6 . 29)) 4.907 {0/4:10} B:0 2.20036 [ 4.40005] ((1 . 24) (2 . 25) (4 . 26) (5 . 28) (14 . 38)) 5.641 {0/2:10} B:0 2.20042 [ 4.40005] ((1 . 22) (2 . 25) (4 . 26) (7 . 28) (9 . 29)) 5.841 {0/7:10} B:0 SIMILARITY (1/min{score1}): 0.8579 [and 1/min{score2}: 0.4527] [2595, 683]: Comparing 1isp_A and 1cuk, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 14 (9 H + 5 S) secondary structure elements in 1cuk, of which 6 satisfy the size requirements. NO SIMILARITY! [2595, 719]: Comparing 1isp_A and 1d0n_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 64 (30 H + 34 S) secondary structure elements in 1d0n_A, of which 7 satisfy the size requirements. 3.13233 [ 2.63833] ((4 . 22) (6 . 27) (7 . 29) (9 . 30)) 5.176 {1/4:6} B:0 3.66616 [ 3.39495] ((4 . 22) (6 . 25) (9 . 27) (11 . 30)) 4.366 {1/3:6} B:0 3.66617 [ 3.39496] ((1 . 22) (6 . 27) (7 . 29) (9 . 30)) 4.548 {1/3:6} B:0 4.20729 [ 4.03669] ((4 . 25) (5 . 29) (6 . 30) (7 . 31)) 9.850 {2/5:6} B:0 3.80250 [ 3.75881] ((1 . 22) (4 . 23) (6 . 25) (7 . 29) (9 . 27) (11 . 30)) 5.308 {3/8:15} B:1 SIMILARITY (1/min{score1}): 0.3193 [and 1/min{score2}: 0.3790] [2595, 729]: Comparing 1isp_A and 1d2f_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 32 (18 H + 14 S) secondary structure elements in 1d2f_A, of which 21 satisfy the size requirements. 1.83350 [ 3.50002] ((1 . 7) (2 . 8) (4 . 13) (5 . 14) (6 . 15) (9 . 17)) 4.078 {0/6:15} B:0 1.83369 [ 3.50005] ((2 . 6) (4 . 7) (5 . 12) (6 . 13) (9 . 15) (11 . 17)) 4.906 {0/7:15} B:0 1.83379 [ 3.50007] ((2 . 6) (4 . 9) (5 . 12) (6 . 13) (9 . 15) (11 . 17)) 5.201 {0/7:15} B:0 2.20088 [ 4.20013] ((2 . 12) (4 . 13) (5 . 14) (6 . 15) (9 . 17)) 7.039 {0/5:10} B:0 2.75005 [ 5.25001] ((5 . 6) (6 . 7) (7 . 8) (9 . 9)) 3.992 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.8176 [and 1/min{score2}: 0.4286] [2595, 735]: Comparing 1isp_A and 1d2p_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 39 (5 H + 34 S) secondary structure elements in 1d2p_A, of which 8 satisfy the size requirements. 2.75041 [ 2.00106] ((1 . 29) (4 . 32) (6 . 36) (9 . 39)) 6.872 {0/2:6} B:0 2.75235 [ 2.00608] ((1 . 29) (2 . 30) (6 . 36) (9 . 39)) 10.638 {0/2:6} B:0 2.75398 [ 2.01028] ((2 . 30) (4 . 31) (6 . 33) (9 . 37)) 12.140 {0/2:6} B:0 5.11074 [ 5.03179] ((1 . 29) (4 . 32) (6 . 37) (9 . 39)) 7.435 {1/2:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.4997] [2595, 740]: Comparing 1isp_A and 1d3b_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 9 (2 H + 7 S) secondary structure elements in 1d3b_A, of which 8 satisfy the size requirements. 2.75011 [ 2.00030] ((7 . 1) (9 . 2) (11 . 4) (13 . 7)) 5.000 {0/0:6} B:0 2.75016 [ 2.00041] ((7 . 1) (9 . 2) (11 . 3) (13 . 7)) 5.421 {0/0:6} B:0 2.75014 [ 2.00038] ((6 . 2) (7 . 1) (9 . 3) (11 . 7)) 5.299 {0/1:6} B:1 2.75016 [ 2.00041] ((6 . 2) (7 . 1) (9 . 4) (11 . 7)) 5.418 {0/1:6} B:1 2.75069 [ 2.00178] ((6 . 2) (7 . 1) (9 . 3) (11 . 6)) 7.823 {0/1:6} B:1 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.4999] [2595, 765]: Comparing 1isp_A and 1d7p_M, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 20 (2 H + 18 S) secondary structure elements in 1d7p_M, of which 13 satisfy the size requirements. 2.75029 [ 3.25017] ((1 . 7) (4 . 12) (6 . 17) (9 . 20)) 6.299 {0/3:6} B:0 2.75148 [ 3.25090] ((4 . 9) (6 . 17) (9 . 19) (11 . 20)) 9.481 {0/1:6} B:0 2.75185 [ 3.25112] ((6 . 5) (9 . 7) (11 . 11) (13 . 12)) 10.025 {0/1:6} B:0 2.75195 [ 3.25118] ((6 . 9) (9 . 12) (11 . 17) (13 . 20)) 10.158 {0/0:6} B:0 3.66627 [ 3.91552] ((1 . 7) (4 . 12) (6 . 18) (9 . 20)) 6.439 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.3990 [and 1/min{score2}: 0.3568] [2595, 767]: Comparing 1isp_A and 1d7y_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 41 (15 H + 26 S) secondary structure elements in 1d7y_A, of which 15 satisfy the size requirements. 1.23921 [ 1.67346] ((1 . 1) (2 . 2) (4 . 3) (6 . 12) (7 . 27) (9 . 29) (11 . 31) (13 . 32) (15 . 33)) 4.613 {1/17:36} B:0 2.20032 [ 3.00013] ((1 . 1) (2 . 2) (4 . 3) (6 . 9) (9 . 12)) 5.475 {0/4:10} B:0 2.20050 [ 3.00020] ((1 . 1) (2 . 2) (4 . 3) (6 . 8) (9 . 12)) 6.125 {0/2:10} B:0 2.75002 [ 3.75001] ((4 . 1) (5 . 2) (6 . 3) (9 . 8)) 3.178 {0/1:6} B:0 2.75003 [ 3.75001] ((6 . 1) (7 . 2) (9 . 3) (13 . 8)) 3.715 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.8070 [and 1/min{score2}: 0.5976] [2595, 782]: Comparing 1isp_A and 1dbh_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 25 (17 H + 8 S) secondary structure elements in 1dbh_A, of which 14 satisfy the size requirements. 2.75578 [ 3.50281] ((2 . 1) (5 . 2) (7 . 4) (15 . 11)) 13.332 {0/4:6} B:0 3.66781 [ 4.06797] ((5 . 3) (7 . 4) (14 . 10) (15 . 11)) 12.133 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.3629 [and 1/min{score2}: 0.2855] [2595, 792]: Comparing 1isp_A and 1dce_B, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 21 (19 H + 2 S) secondary structure elements in 1dce_B, of which 14 satisfy the size requirements. NO SIMILARITY! [2595, 795]: Comparing 1isp_A and 1dcj_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 6 (2 H + 4 S) secondary structure elements in 1dcj_A, of which 6 satisfy the size requirements. 2.20004 [ 1.20024] ((4 . 1) (5 . 2) (6 . 3) (7 . 4) (9 . 5)) 3.220 {0/4:10} B:0 2.20103 [ 1.20628] ((1 . 1) (2 . 2) (4 . 3) (5 . 4) (6 . 5)) 7.317 {0/3:10} B:0 2.75004 [ 1.50027] ((4 . 1) (5 . 2) (6 . 5) (7 . 4)) 3.914 {0/4:6} B:1 2.75050 [ 1.50310] ((2 . 2) (4 . 1) (5 . 4) (6 . 5)) 7.242 {0/3:6} B:1 2.08821 [ 1.71831] ((1 . 3) (4 . 1) (5 . 2) (6 . 6) (7 . 4) (9 . 5)) 3.281 {1/6:15} B:2 SIMILARITY (1/min{score1}): 0.4789 [and 1/min{score2}: 0.8332] [2595, 796]: Comparing 1isp_A and 1dcp_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 7 (3 H + 4 S) secondary structure elements in 1dcp_A, of which 6 satisfy the size requirements. 2.75044 [ 1.50272] ((7 . 1) (9 . 3) (13 . 6) (15 . 7)) 7.010 {0/0:6} B:0 2.75068 [ 1.50416] ((2 . 1) (4 . 3) (5 . 4) (6 . 5)) 7.797 {0/0:6} B:0 2.75118 [ 1.50725] ((7 . 1) (9 . 3) (11 . 5) (13 . 6)) 8.964 {0/0:6} B:0 5.11086 [ 5.01031] ((1 . 3) (2 . 4) (4 . 5) (7 . 7)) 9.185 {1/2:6} B:0 2.75012 [ 1.50077] ((9 . 5) (11 . 6) (13 . 3) (15 . 4)) 5.108 {0/0:6} B:1 SIMILARITY (1/min{score1}): 0.4544 [and 1/min{score2}: 0.8310] [2595, 801]: Comparing 1isp_A and 1dcz_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 7 (0 H + 7 S) secondary structure elements in 1dcz_A, of which 6 satisfy the size requirements. NO SIMILARITY! [2595, 812]: Comparing 1isp_A and 1de4_C, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 40 (23 H + 17 S) secondary structure elements in 1de4_C, of which 12 satisfy the size requirements. 1.89285 [ 2.04648] ((1 . 9) (5 . 10) (6 . 11) (11 . 13) (13 . 16) (14 . 17)) 5.669 {1/9:15} B:0 2.03190 [ 2.10366] ((1 . 9) (5 . 10) (6 . 11) (7 . 12) (9 . 13) (11 . 16) (14 . 17)) 5.966 {2/11:21} B:0 2.20022 [ 2.40017] ((7 . 10) (9 . 11) (11 . 13) (13 . 16) (15 . 17)) 4.956 {0/0:10} B:0 2.29222 [ 2.47229] ((5 . 10) (6 . 11) (9 . 13) (13 . 16) (14 . 17)) 5.762 {1/7:10} B:0 2.75011 [ 3.00008] ((5 . 10) (6 . 11) (9 . 13) (15 . 17)) 4.909 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.5585 [and 1/min{score2}: 0.5285] [2595, 818]: Comparing 1isp_A and 1df7_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 16 (5 H + 11 S) secondary structure elements in 1df7_A, of which 13 satisfy the size requirements. 2.20024 [ 2.60015] ((4 . 7) (5 . 9) (6 . 10) (7 . 11) (9 . 12)) 5.088 {0/7:10} B:0 2.20028 [ 2.60017] ((4 . 4) (5 . 9) (6 . 10) (7 . 11) (9 . 12)) 5.269 {0/6:10} B:0 2.75008 [ 3.25005] ((1 . 1) (2 . 3) (9 . 12) (11 . 14)) 4.569 {0/2:6} B:0 2.75008 [ 3.25005] ((1 . 1) (2 . 3) (4 . 4) (11 . 14)) 4.592 {0/3:6} B:0 2.75011 [ 3.25007] ((2 . 3) (4 . 4) (9 . 12) (11 . 14)) 4.998 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.7456 [and 1/min{score2}: 0.6573] [2595, 819]: Comparing 1isp_A and 1df9_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 11 (3 H + 8 S) secondary structure elements in 1df9_A, of which 9 satisfy the size requirements. 3.66627 [ 3.49445] ((1 . 2) (11 . 9) (13 . 10) (14 . 11)) 6.520 {1/3:6} B:0 2.81239 [ 2.65425] ((6 . 2) (9 . 5) (11 . 10) (13 . 9) (14 . 11)) 8.296 {1/4:10} B:1 5.11070 [ 5.05054] ((4 . 5) (6 . 9) (7 . 11) (9 . 10)) 6.349 {2/4:6} B:1 SIMILARITY (1/min{score1}): 0.3556 [and 1/min{score2}: 0.3768] [2595, 824]: Comparing 1isp_A and 1dfc_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 54 (7 H + 47 S) secondary structure elements in 1dfc_A, of which 7 satisfy the size requirements. NO SIMILARITY! [2595, 834]: Comparing 1isp_A and 1dgs_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 44 (25 H + 19 S) secondary structure elements in 1dgs_A, of which 13 satisfy the size requirements. 2.92741 [ 3.36237] ((2 . 34) (7 . 37) (14 . 43) (15 . 44)) 11.297 {1/5:6} B:0 5.11101 [ 5.20992] ((5 . 35) (7 . 38) (14 . 44) (15 . 43)) 10.568 {2/4:6} B:1 SIMILARITY (1/min{score1}): 0.3416 [and 1/min{score2}: 0.2974] [2595, 861]: Comparing 1isp_A and 1dki_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 19 (8 H + 11 S) secondary structure elements in 1dki_A, of which 17 satisfy the size requirements. 2.75216 [ 4.25059] ((5 . 10) (7 . 14) (11 . 16) (13 . 18)) 10.423 {0/1:6} B:0 3.13335 [ 4.37228] ((1 . 7) (5 . 10) (7 . 11) (11 . 16)) 9.737 {1/4:6} B:0 3.13432 [ 4.37264] ((2 . 10) (5 . 14) (9 . 16) (11 . 19)) 11.380 {1/4:6} B:0 3.13545 [ 4.37305] ((2 . 6) (4 . 7) (7 . 10) (11 . 12)) 12.690 {1/4:6} B:0 3.66638 [ 4.60516] ((5 . 11) (6 . 12) (7 . 14) (9 . 15)) 7.469 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.4782 [and 1/min{score2}: 0.3430] [2595, 901]: Comparing 1isp_A and 1doz_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 21 (13 H + 8 S) secondary structure elements in 1doz_A, of which 21 satisfy the size requirements. 1.37570 [ 2.62510] ((1 . 1) (2 . 4) (4 . 5) (5 . 6) (6 . 7) (7 . 8) (9 . 9) (15 . 21)) 4.669 {0/15:28} B:0 1.57207 [ 3.00009] ((1 . 12) (2 . 14) (4 . 15) (5 . 16) (6 . 17) (7 . 18) (9 . 20)) 5.059 {0/13:21} B:0 1.83438 [ 3.50015] ((1 . 12) (4 . 15) (5 . 16) (6 . 17) (7 . 18) (11 . 20)) 6.407 {0/8:15} B:0 2.20069 [ 4.20010] ((2 . 10) (6 . 12) (9 . 15) (11 . 17) (13 . 20)) 6.616 {0/3:10} B:0 2.20074 [ 4.20011] ((1 . 1) (5 . 4) (6 . 5) (9 . 7) (11 . 9)) 6.748 {0/3:10} B:0 SIMILARITY (1/min{score1}): 0.7271 [and 1/min{score2}: 0.4086] [2595, 904]: Comparing 1isp_A and 1dp7_P, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 7 (3 H + 4 S) secondary structure elements in 1dp7_P, of which 7 satisfy the size requirements. 2.75140 [ 1.75541] ((2 . 1) (4 . 3) (5 . 5) (6 . 6)) 9.346 {0/4:6} B:0 SIMILARITY (1/min{score1}): 0.3635 [and 1/min{score2}: 0.5697] [2595, 913]: Comparing 1isp_A and 1dq3_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 44 (14 H + 30 S) secondary structure elements in 1dq3_A, of which 6 satisfy the size requirements. 3.66626 [ 3.36716] ((6 . 16) (9 . 17) (11 . 20) (14 . 21)) 6.388 {1/3:6} B:0 2.75038 [ 1.50232] ((6 . 16) (11 . 17) (13 . 20) (15 . 15)) 6.738 {0/1:6} B:1 2.81181 [ 2.53287] ((6 . 16) (9 . 17) (11 . 20) (14 . 21) (15 . 15)) 6.119 {1/4:10} B:1 6.06541 [ 6.00614] ((6 . 16) (7 . 15) (13 . 20) (14 . 21)) 11.367 {3/5:6} B:1 5.11071 [ 5.01015] ((2 . 21) (6 . 16) (13 . 20) (15 . 15)) 6.513 {2/4:6} B:2 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.6656] [2595, 928]: Comparing 1isp_A and 1drk, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 21 (9 H + 12 S) secondary structure elements in 1drk, of which 21 satisfy the size requirements. 1.83347 [ 3.50002] ((1 . 1) (2 . 2) (4 . 3) (5 . 4) (6 . 7) (9 . 8)) 3.820 {0/7:15} B:0 1.83352 [ 3.50003] ((1 . 1) (2 . 2) (4 . 5) (5 . 6) (6 . 7) (9 . 8)) 4.173 {0/6:15} B:0 1.83353 [ 3.50003] ((1 . 1) (2 . 2) (4 . 3) (5 . 6) (6 . 7) (9 . 8)) 4.246 {0/7:15} B:0 1.83361 [ 3.50004] ((2 . 9) (4 . 10) (5 . 13) (6 . 14) (9 . 16) (11 . 18)) 4.592 {0/4:15} B:0 2.20079 [ 4.20011] ((2 . 4) (4 . 5) (5 . 6) (6 . 7) (9 . 8)) 6.857 {0/5:10} B:0 SIMILARITY (1/min{score1}): 0.9085 [and 1/min{score2}: 0.4762] [2595, 937]: Comparing 1isp_A and 1dtj_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 6 (3 H + 3 S) secondary structure elements in 1dtj_A, of which 6 satisfy the size requirements. 2.75034 [ 1.50207] ((4 . 1) (5 . 3) (6 . 4) (9 . 5)) 6.545 {0/1:6} B:0 3.66645 [ 3.36739] ((4 . 1) (5 . 2) (6 . 4) (9 . 5)) 7.960 {1/3:6} B:0 3.66716 [ 3.36831] ((4 . 1) (5 . 3) (6 . 4) (7 . 6)) 10.726 {1/3:6} B:0 5.11086 [ 5.01031] ((1 . 1) (2 . 2) (4 . 4) (5 . 6)) 9.184 {1/2:6} B:0 2.75014 [ 1.50089] ((1 . 5) (4 . 1) (5 . 3) (6 . 4)) 5.295 {0/1:6} B:1 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.6663] [2595, 943]: Comparing 1isp_A and 1dus_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 15 (5 H + 10 S) secondary structure elements in 1dus_A, of which 14 satisfy the size requirements. 1.83341 [ 2.33337] ((1 . 4) (2 . 5) (4 . 6) (6 . 9) (9 . 12) (11 . 14)) 3.353 {0/7:15} B:0 1.83480 [ 2.33405] ((2 . 5) (4 . 6) (5 . 7) (9 . 9) (11 . 12) (13 . 14)) 6.978 {0/10:15} B:0 2.20009 [ 2.80005] ((1 . 6) (2 . 7) (4 . 8) (6 . 9) (7 . 10)) 4.035 {0/5:10} B:0 2.20022 [ 2.80011] ((4 . 4) (6 . 6) (9 . 9) (11 . 12) (13 . 14)) 4.999 {0/2:10} B:0 2.20065 [ 2.80032] ((5 . 3) (6 . 4) (9 . 6) (11 . 8) (15 . 10)) 6.537 {0/1:10} B:0 SIMILARITY (1/min{score1}): 0.8178 [and 1/min{score2}: 0.6427] [2595, 945]: Comparing 1isp_A and 1duv_G, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 25 (16 H + 9 S) secondary structure elements in 1duv_G, of which 13 satisfy the size requirements. 1.92543 [ 2.22445] ((1 . 12) (4 . 14) (5 . 18) (6 . 19) (7 . 21) (9 . 22)) 4.345 {1/8:15} B:0 2.20006 [ 2.60004] ((1 . 12) (2 . 13) (4 . 14) (9 . 19) (11 . 22)) 3.593 {0/5:10} B:0 2.20059 [ 2.60036] ((1 . 12) (2 . 13) (4 . 14) (6 . 19) (14 . 24)) 6.363 {0/4:10} B:0 2.36236 [ 2.70346] ((1 . 12) (2 . 13) (5 . 18) (6 . 19) (9 . 22)) 3.812 {1/6:10} B:0 2.36354 [ 2.70424] ((2 . 13) (4 . 14) (5 . 16) (9 . 19) (11 . 22)) 8.089 {1/6:10} B:0 SIMILARITY (1/min{score1}): 0.8177 [and 1/min{score2}: 0.6921] [2595, 949]: Comparing 1isp_A and 1dv1_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 37 (18 H + 19 S) secondary structure elements in 1dv1_A, of which 7 satisfy the size requirements. 2.75049 [ 1.75189] ((6 . 27) (9 . 30) (14 . 35) (15 . 36)) 7.185 {0/2:6} B:0 2.75066 [ 1.75256] ((1 . 27) (4 . 32) (5 . 33) (7 . 35)) 7.746 {0/0:6} B:0 2.75190 [ 1.75735] ((4 . 27) (6 . 30) (9 . 32) (14 . 37)) 10.096 {0/3:6} B:0 3.66657 [ 3.39546] ((1 . 30) (4 . 32) (5 . 33) (7 . 37)) 8.651 {1/3:6} B:0 5.11115 [ 5.01917] ((6 . 27) (9 . 30) (14 . 35) (15 . 37)) 11.466 {1/2:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.5708] [2595, 960]: Comparing 1isp_A and 1dx4_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 42 (28 H + 14 S) secondary structure elements in 1dx4_A, of which 33 satisfy the size requirements. 1.00054 [ 3.00002] ((1 . 9) (2 . 11) (4 . 12) (5 . 16) (6 . 19) (7 . 20) (9 . 21) (11 . 29) (13 . 35) (14 . 37) (15 . 39)) 3.451 {0/33:55} B:0 2.20003 [ 6.60000] ((1 . 12) (5 . 16) (6 . 19) (7 . 20) (9 . 21)) 3.053 {0/6:10} B:0 2.20022 [ 6.60001] ((2 . 11) (4 . 12) (7 . 16) (9 . 19) (11 . 21)) 4.964 {0/6:10} B:0 2.75037 [ 8.25001] ((4 . 1) (6 . 4) (13 . 9) (15 . 11)) 6.694 {0/4:6} B:0 2.75042 [ 8.25002] ((1 . 29) (7 . 34) (9 . 35) (14 . 39)) 6.932 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.9995 [and 1/min{score2}: 0.3333] [2595, 978]: Comparing 1isp_A and 1dys_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 23 (13 H + 10 S) secondary structure elements in 1dys_A, of which 18 satisfy the size requirements. 1.39695 [ 2.25511] ((2 . 9) (4 . 10) (5 . 12) (6 . 13) (7 . 15) (9 . 16) (11 . 19) (13 . 22)) 6.980 {1/15:28} B:0 2.08883 [ 3.06924] ((5 . 2) (6 . 4) (7 . 5) (9 . 6) (11 . 10) (13 . 13)) 6.320 {1/6:15} B:0 2.20042 [ 3.60009] ((2 . 9) (5 . 12) (6 . 13) (11 . 16) (13 . 19)) 5.838 {0/6:10} B:0 2.20083 [ 3.60019] ((4 . 4) (5 . 5) (6 . 6) (7 . 8) (9 . 10)) 6.935 {0/3:10} B:0 2.20114 [ 3.60026] ((2 . 9) (4 . 10) (5 . 12) (6 . 13) (11 . 16)) 7.504 {0/4:10} B:0 SIMILARITY (1/min{score1}): 0.8157 [and 1/min{score2}: 0.4998] [2595, 980]: Comparing 1isp_A and 1dz3_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 10 (5 H + 5 S) secondary structure elements in 1dz3_A, of which 10 satisfy the size requirements. 1.40780 [ 1.29297] ((1 . 1) (2 . 2) (4 . 3) (5 . 4) (6 . 5) (7 . 6) (9 . 7) (11 . 9)) 3.836 {1/13:28} B:0 1.57170 [ 1.42893] ((1 . 1) (2 . 2) (4 . 3) (5 . 4) (7 . 6) (9 . 7) (11 . 9)) 4.081 {0/11:21} B:0 1.83363 [ 1.66706] ((1 . 1) (2 . 2) (4 . 5) (5 . 6) (6 . 7) (9 . 9)) 4.660 {0/5:15} B:0 1.83367 [ 1.66712] ((1 . 1) (2 . 2) (4 . 3) (5 . 4) (7 . 6) (9 . 9)) 4.835 {0/8:15} B:0 2.20011 [ 2.00015] ((2 . 2) (4 . 3) (5 . 6) (6 . 7) (9 . 9)) 4.231 {0/5:10} B:0 SIMILARITY (1/min{score1}): 0.7257 [and 1/min{score2}: 0.7975] [2595, 1005]: Comparing 1isp_A and 1e29_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 8 (6 H + 2 S) secondary structure elements in 1e29_A, of which 7 satisfy the size requirements. NO SIMILARITY! [2595, 1007]: Comparing 1isp_A and 1e2t_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 22 (9 H + 13 S) secondary structure elements in 1e2t_A, of which 18 satisfy the size requirements. 2.75031 [ 4.50007] ((2 . 6) (4 . 7) (6 . 9) (9 . 13)) 6.402 {0/4:6} B:0 2.75087 [ 4.50020] ((5 . 6) (6 . 7) (11 . 11) (13 . 13)) 8.290 {0/3:6} B:0 2.75126 [ 4.50029] ((4 . 12) (6 . 14) (9 . 17) (11 . 19)) 9.106 {0/3:6} B:0 3.66696 [ 4.80641] ((5 . 6) (6 . 8) (9 . 9) (14 . 15)) 10.159 {1/3:6} B:0 3.66739 [ 4.80660] ((5 . 6) (6 . 8) (11 . 13) (14 . 15)) 11.297 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.4543 [and 1/min{score2}: 0.2778] [2595, 1008]: Comparing 1isp_A and 1e2w_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 21 (5 H + 16 S) secondary structure elements in 1e2w_A, of which 10 satisfy the size requirements. 2.75147 [ 2.50195] ((4 . 5) (7 . 11) (9 . 13) (11 . 15)) 9.456 {0/1:6} B:0 3.66636 [ 3.57072] ((4 . 3) (6 . 8) (7 . 11) (11 . 15)) 7.309 {1/3:6} B:0 5.11082 [ 5.07653] ((1 . 3) (4 . 5) (9 . 13) (11 . 16)) 8.751 {2/4:6} B:0 5.11099 [ 5.07670] ((2 . 1) (4 . 3) (9 . 8) (13 . 15)) 10.399 {2/4:6} B:0 5.11159 [ 5.07731] ((2 . 1) (4 . 3) (6 . 8) (13 . 16)) 13.456 {2/4:6} B:0 SIMILARITY (1/min{score1}): 0.4543 [and 1/min{score2}: 0.4997] [2595, 1034]: Comparing 1isp_A and 1e4f_T, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 36 (14 H + 22 S) secondary structure elements in 1e4f_T, of which 13 satisfy the size requirements. 2.75066 [ 3.25040] ((7 . 19) (9 . 20) (11 . 22) (15 . 27)) 7.751 {0/0:6} B:0 2.75094 [ 3.25057] ((2 . 27) (4 . 29) (5 . 31) (6 . 32)) 8.454 {0/3:6} B:0 2.75671 [ 3.25407] ((1 . 25) (2 . 27) (5 . 31) (6 . 32)) 13.843 {0/3:6} B:0 2.75930 [ 3.25565] ((2 . 23) (6 . 26) (7 . 27) (15 . 36)) 15.025 {0/2:6} B:0 3.13229 [ 3.50333] ((5 . 27) (6 . 29) (7 . 31) (9 . 32)) 4.456 {1/4:6} B:0 SIMILARITY (1/min{score1}): 0.4358 [and 1/min{score2}: 0.3839] [2595, 1043]: Comparing 1isp_A and 1e5k_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 18 (8 H + 10 S) secondary structure elements in 1e5k_A, of which 13 satisfy the size requirements. 1.83417 [ 2.16717] ((1 . 1) (2 . 5) (4 . 6) (5 . 7) (9 . 10) (11 . 12)) 6.055 {0/8:15} B:0 2.20003 [ 2.60002] ((2 . 5) (4 . 6) (5 . 9) (6 . 10) (9 . 12)) 3.057 {0/7:10} B:0 2.20008 [ 2.60005] ((1 . 1) (2 . 5) (7 . 9) (9 . 10) (11 . 12)) 3.866 {0/5:10} B:0 2.20009 [ 2.60005] ((2 . 5) (5 . 9) (6 . 10) (9 . 12) (13 . 17)) 3.931 {0/8:10} B:0 2.20082 [ 2.60050] ((1 . 1) (5 . 5) (7 . 9) (9 . 10) (11 . 12)) 6.916 {0/5:10} B:0 SIMILARITY (1/min{score1}): 0.5540 [and 1/min{score2}: 0.5372] [2595, 1082]: Comparing 1isp_A and 1ea5_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 39 (24 H + 15 S) secondary structure elements in 1ea5_A, of which 34 satisfy the size requirements. 1.00037 [ 3.09092] ((1 . 9) (2 . 11) (4 . 12) (5 . 14) (6 . 16) (7 . 17) (9 . 19) (11 . 24) (13 . 30) (14 . 32) (15 . 35)) 3.131 {0/33:55} B:0 1.83952 [ 5.66688] ((2 . 11) (5 . 14) (6 . 16) (7 . 17) (9 . 19) (15 . 23)) 10.009 {0/9:15} B:0 2.20035 [ 6.80001] ((2 . 11) (4 . 12) (7 . 14) (9 . 16) (11 . 19)) 5.581 {0/5:10} B:0 2.20333 [ 6.80011] ((1 . 1) (4 . 4) (11 . 9) (13 . 12) (15 . 14)) 9.827 {0/6:10} B:0 2.75001 [ 8.50000] ((1 . 24) (5 . 29) (6 . 30) (9 . 36)) 2.734 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.9996 [and 1/min{score2}: 0.3235] [2595, 1084]: Comparing 1isp_A and 1eaf, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 22 (11 H + 11 S) secondary structure elements in 1eaf, of which 17 satisfy the size requirements. 2.75043 [ 4.25012] ((2 . 6) (4 . 11) (6 . 17) (9 . 18)) 6.951 {0/4:6} B:0 2.75079 [ 4.25021] ((1 . 3) (5 . 6) (6 . 10) (11 . 17)) 8.107 {0/3:6} B:0 2.75137 [ 4.25037] ((1 . 3) (5 . 6) (11 . 17) (13 . 18)) 9.298 {0/4:6} B:0 2.75149 [ 4.25040] ((1 . 3) (6 . 10) (11 . 17) (13 . 18)) 9.490 {0/3:6} B:0 2.75190 [ 4.25051] ((1 . 3) (6 . 9) (11 . 17) (13 . 18)) 10.087 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.2353] [2595, 1121]: Comparing 1isp_A and 1eej_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 20 (9 H + 11 S) secondary structure elements in 1eej_A, of which 6 satisfy the size requirements. NO SIMILARITY! [2595, 1124]: Comparing 1isp_A and 1eem_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 16 (12 H + 4 S) secondary structure elements in 1eem_A, of which 8 satisfy the size requirements. NO SIMILARITY! [2595, 1165]: Comparing 1isp_A and 1ehy_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 23 (15 H + 8 S) secondary structure elements in 1ehy_A, of which 19 satisfy the size requirements. 1.10013 [ 1.90003] ((1 . 4) (2 . 5) (4 . 7) (5 . 9) (6 . 10) (7 . 11) (9 . 12) (11 . 19) (13 . 21) (15 . 23)) 2.596 {0/25:45} B:0 1.10022 [ 1.90004] ((1 . 4) (2 . 6) (4 . 7) (5 . 9) (6 . 10) (7 . 11) (9 . 12) (11 . 19) (13 . 21) (15 . 23)) 2.947 {0/19:45} B:0 1.22231 [ 2.11113] ((1 . 4) (2 . 5) (4 . 7) (6 . 10) (7 . 11) (9 . 12) (11 . 19) (13 . 21) (15 . 23)) 2.555 {0/18:36} B:0 2.20003 [ 3.80001] ((1 . 7) (5 . 9) (6 . 10) (7 . 11) (9 . 12)) 2.951 {0/5:10} B:0 2.20016 [ 3.80003] ((2 . 5) (4 . 7) (7 . 9) (9 . 10) (11 . 12)) 4.618 {0/6:10} B:0 SIMILARITY (1/min{score1}): 0.9871 [and 1/min{score2}: 0.5781] [2595, 1167]: Comparing 1isp_A and 1ei1_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 29 (13 H + 16 S) secondary structure elements in 1ei1_A, of which 10 satisfy the size requirements. 2.75077 [ 2.50102] ((5 . 19) (6 . 21) (9 . 22) (15 . 28)) 8.038 {0/2:6} B:0 2.92641 [ 2.72588] ((1 . 22) (2 . 24) (6 . 27) (7 . 28)) 9.938 {1/5:6} B:0 3.13362 [ 2.97464] ((5 . 19) (6 . 20) (14 . 26) (15 . 28)) 10.282 {1/4:6} B:0 3.66736 [ 3.57180] ((4 . 22) (5 . 24) (7 . 26) (9 . 27)) 11.211 {1/3:6} B:0 3.66808 [ 3.57259] ((1 . 20) (5 . 24) (9 . 27) (15 . 29)) 12.597 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.6015 [and 1/min{score2}: 0.6471] [2595, 1169]: Comparing 1isp_A and 1ei5_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 47 (16 H + 31 S) secondary structure elements in 1ei5_A, of which 8 satisfy the size requirements. NO SIMILARITY! [2595, 1195]: Comparing 1isp_A and 1ekm_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 55 (19 H + 36 S) secondary structure elements in 1ekm_A, of which 6 satisfy the size requirements. NO SIMILARITY! [2595, 1201]: Comparing 1isp_A and 1el5_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 36 (13 H + 23 S) secondary structure elements in 1el5_A, of which 21 satisfy the size requirements. 2.20060 [ 4.20009] ((1 . 1) (2 . 2) (4 . 3) (13 . 12) (14 . 13)) 6.408 {0/5:10} B:0 2.75024 [ 5.25003] ((6 . 4) (7 . 5) (11 . 7) (13 . 9)) 6.015 {0/2:6} B:0 2.76184 [ 5.25171] ((1 . 3) (6 . 7) (7 . 8) (9 . 9)) 15.966 {0/1:6} B:0 2.77054 [ 5.25298] ((4 . 7) (6 . 9) (11 . 15) (13 . 17)) 18.345 {0/4:6} B:0 3.13229 [ 5.31623] ((2 . 13) (4 . 14) (6 . 18) (7 . 19)) 4.465 {1/4:6} B:0 SIMILARITY (1/min{score1}): 0.4544 [and 1/min{score2}: 0.3009] [2595, 1204]: Comparing 1isp_A and 1elj_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 33 (18 H + 15 S) secondary structure elements in 1elj_A, of which 26 satisfy the size requirements. 2.36474 [ 5.21389] ((4 . 1) (5 . 2) (6 . 5) (7 . 6) (11 . 11)) 9.581 {1/6:10} B:0 2.50699 [ 5.22835] ((5 . 2) (6 . 3) (7 . 4) (9 . 5) (13 . 11)) 8.392 {1/5:10} B:0 2.75008 [ 6.50001] ((6 . 1) (9 . 3) (11 . 5) (13 . 11)) 4.608 {0/1:6} B:0 2.75018 [ 6.50001] ((4 . 5) (5 . 6) (7 . 8) (9 . 11)) 5.559 {0/3:6} B:0 2.75030 [ 6.50002] ((2 . 4) (4 . 5) (5 . 8) (6 . 11)) 6.363 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.5191 [and 1/min{score2}: 0.2975] [2595, 1210]: Comparing 1isp_A and 1elw_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 7 (7 H + 0 S) secondary structure elements in 1elw_A, of which 7 satisfy the size requirements. NO SIMILARITY! [2595, 1211]: Comparing 1isp_A and 1em2_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 17 (5 H + 12 S) secondary structure elements in 1em2_A, of which 13 satisfy the size requirements. 2.75018 [ 3.25011] ((2 . 7) (4 . 8) (6 . 10) (9 . 14)) 5.566 {0/4:6} B:0 2.75077 [ 3.25046] ((1 . 4) (9 . 11) (11 . 15) (15 . 17)) 8.041 {0/3:6} B:0 2.75155 [ 3.25094] ((1 . 4) (9 . 11) (13 . 15) (15 . 17)) 9.582 {0/3:6} B:0 2.75261 [ 3.25159] ((11 . 3) (13 . 5) (14 . 6) (15 . 7)) 10.930 {0/3:6} B:0 3.13269 [ 3.50362] ((4 . 3) (6 . 5) (7 . 6) (11 . 10)) 7.757 {1/4:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.3077] [2595, 1217]: Comparing 1isp_A and 1enf_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 24 (7 H + 17 S) secondary structure elements in 1enf_A, of which 8 satisfy the size requirements. NO SIMILARITY! [2595, 1224]: Comparing 1isp_A and 1eo9_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 17 (6 H + 11 S) secondary structure elements in 1eo9_A, of which 13 satisfy the size requirements. 2.75040 [ 3.25024] ((1 . 5) (4 . 7) (6 . 10) (9 . 14)) 6.823 {0/3:6} B:0 2.75067 [ 3.25041] ((1 . 7) (4 . 10) (5 . 11) (6 . 14)) 7.783 {0/2:6} B:0 2.75083 [ 3.25050] ((2 . 1) (6 . 3) (11 . 7) (13 . 9)) 8.207 {0/4:6} B:0 2.75181 [ 3.25110] ((2 . 2) (4 . 3) (6 . 6) (9 . 7)) 9.976 {0/2:6} B:0 2.75183 [ 3.25111] ((6 . 3) (9 . 5) (11 . 6) (13 . 7)) 9.999 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.3077] [2595, 1233]: Comparing 1isp_A and 1ep3_B, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 25 (8 H + 17 S) secondary structure elements in 1ep3_B, of which 11 satisfy the size requirements. 2.20006 [ 2.20006] ((1 . 11) (4 . 14) (6 . 20) (7 . 21) (9 . 22)) 3.552 {0/2:10} B:0 2.20006 [ 2.20006] ((1 . 11) (2 . 13) (4 . 14) (6 . 20) (9 . 22)) 3.663 {0/2:10} B:0 2.20008 [ 2.20008] ((1 . 11) (5 . 19) (6 . 20) (7 . 21) (9 . 22)) 3.845 {0/0:10} B:0 2.20013 [ 2.20013] ((1 . 14) (5 . 19) (6 . 20) (7 . 21) (9 . 22)) 4.375 {0/2:10} B:0 2.20015 [ 2.20015] ((1 . 11) (2 . 13) (4 . 14) (9 . 20) (11 . 22)) 4.530 {0/2:10} B:0 SIMILARITY (1/min{score1}): 0.8165 [and 1/min{score2}: 0.8165] [2595, 1267]: Comparing 1isp_A and 1euh_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 42 (18 H + 24 S) secondary structure elements in 1euh_A, of which 33 satisfy the size requirements. 2.20002 [ 6.60000] ((1 . 13) (2 . 14) (4 . 15) (6 . 19) (9 . 21)) 2.656 {0/2:10} B:0 2.20004 [ 6.60000] ((1 . 13) (2 . 14) (6 . 19) (7 . 20) (9 . 21)) 3.255 {0/0:10} B:0 2.20006 [ 6.60000] ((4 . 13) (5 . 14) (6 . 15) (7 . 16) (9 . 17)) 3.578 {0/4:10} B:0 2.20050 [ 6.60002] ((1 . 13) (2 . 14) (4 . 15) (6 . 17) (9 . 19)) 6.127 {0/2:10} B:0 2.20060 [ 6.60002] ((1 . 24) (5 . 25) (6 . 31) (9 . 33) (15 . 34)) 6.394 {0/1:10} B:0 SIMILARITY (1/min{score1}): 0.9040 [and 1/min{score2}: 0.3328] [2595, 1268]: Comparing 1isp_A and 1eup_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 31 (21 H + 10 S) secondary structure elements in 1eup_A, of which 24 satisfy the size requirements. 5.11105 [ 6.62055] ((2 . 12) (4 . 13) (7 . 16) (14 . 19)) 10.849 {2/4:6} B:0 6.71504 [ 7.56320] ((4 . 13) (5 . 15) (7 . 16) (14 . 19)) 14.958 {2/3:6} B:0 SIMILARITY (1/min{score1}): 0.1957 [and 1/min{score2}: 0.1510] [2595, 1294]: Comparing 1isp_A and 1ex0_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 54 (15 H + 39 S) secondary structure elements in 1ex0_A, of which 9 satisfy the size requirements. 2.75112 [ 2.25204] ((1 . 39) (4 . 41) (6 . 44) (9 . 47)) 8.836 {0/1:6} B:0 2.75131 [ 2.25240] ((1 . 40) (4 . 42) (5 . 45) (6 . 46)) 9.201 {0/2:6} B:0 2.75176 [ 2.25321] ((4 . 39) (6 . 41) (9 . 44) (13 . 47)) 9.899 {0/1:6} B:0 2.75231 [ 2.25421] ((6 . 39) (9 . 41) (11 . 44) (13 . 46)) 10.596 {0/0:6} B:0 3.66771 [ 3.49611] ((4 . 41) (6 . 44) (7 . 45) (11 . 47)) 11.949 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.3635 [and 1/min{score2}: 0.4440] [2595, 1301]: Comparing 1isp_A and 1exj_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 19 (7 H + 12 S) secondary structure elements in 1exj_A, of which 7 satisfy the size requirements. NO SIMILARITY! [2595, 1324]: Comparing 1isp_A and 1ezg_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 6 (0 H + 6 S) secondary structure elements in 1ezg_A, of which 6 satisfy the size requirements. NO SIMILARITY! [2595, 1345]: Comparing 1isp_A and 1f0i_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 37 (19 H + 18 S) secondary structure elements in 1f0i_A, of which 17 satisfy the size requirements. 2.20081 [ 3.40022] ((1 . 7) (4 . 9) (5 . 10) (6 . 12) (14 . 19)) 6.891 {0/2:10} B:0 2.75022 [ 4.25006] ((1 . 9) (2 . 10) (4 . 12) (6 . 14)) 5.908 {0/2:6} B:0 2.75030 [ 4.25008] ((5 . 6) (7 . 8) (11 . 9) (13 . 12)) 6.378 {0/3:6} B:0 2.75041 [ 4.25011] ((5 . 6) (7 . 8) (9 . 9) (13 . 12)) 6.882 {0/3:6} B:0 2.75046 [ 4.25013] ((1 . 9) (2 . 10) (4 . 12) (7 . 17)) 7.087 {0/4:6} B:0 SIMILARITY (1/min{score1}): 0.5973 [and 1/min{score2}: 0.4831] [2595, 1366]: Comparing 1isp_A and 1f1u_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 26 (8 H + 18 S) secondary structure elements in 1f1u_A, of which 12 satisfy the size requirements. 2.75031 [ 3.00024] ((4 . 12) (5 . 13) (6 . 16) (11 . 21)) 6.403 {0/2:6} B:0 2.75071 [ 3.00055] ((4 . 12) (5 . 13) (6 . 14) (13 . 21)) 7.900 {0/4:6} B:0 3.66639 [ 3.78161] ((4 . 12) (5 . 13) (9 . 17) (13 . 21)) 7.543 {1/3:6} B:0 3.66642 [ 3.78164] ((4 . 17) (5 . 18) (6 . 20) (9 . 22)) 7.765 {1/3:6} B:0 3.66763 [ 3.78275] ((7 . 13) (9 . 14) (13 . 17) (14 . 18)) 11.797 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.5451 [and 1/min{score2}: 0.4998] [2595, 1388]: Comparing 1isp_A and 1f3v_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 12 (7 H + 5 S) secondary structure elements in 1f3v_A, of which 11 satisfy the size requirements. 2.75056 [ 2.75056] ((1 . 4) (4 . 5) (5 . 7) (6 . 8)) 7.428 {0/2:6} B:0 2.75112 [ 2.75112] ((4 . 1) (7 . 3) (9 . 5) (15 . 11)) 8.844 {0/2:6} B:0 2.75161 [ 2.75161] ((4 . 1) (7 . 3) (9 . 4) (15 . 11)) 9.686 {0/3:6} B:0 2.75227 [ 2.75227] ((7 . 3) (11 . 5) (14 . 7) (15 . 10)) 10.546 {0/2:6} B:0 2.92526 [ 2.92526] ((4 . 5) (5 . 7) (6 . 8) (7 . 10)) 6.848 {1/5:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.3636] [2595, 1395]: Comparing 1isp_A and 1f45_B, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 6 (6 H + 0 S) secondary structure elements in 1f45_B, of which 6 satisfy the size requirements. NO SIMILARITY! [2595, 1410]: Comparing 1isp_A and 1f60_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 35 (11 H + 24 S) secondary structure elements in 1f60_A, of which 7 satisfy the size requirements. 2.75129 [ 1.75498] ((4 . 19) (6 . 22) (9 . 25) (11 . 26)) 9.153 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.3635 [and 1/min{score2}: 0.5698] [2595, 1415]: Comparing 1isp_A and 1f68_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 6 (6 H + 0 S) secondary structure elements in 1f68_A, of which 6 satisfy the size requirements. NO SIMILARITY! [2595, 1425]: Comparing 1isp_A and 1f7d_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 12 (1 H + 11 S) secondary structure elements in 1f7d_A, of which 9 satisfy the size requirements. 2.75210 [ 2.25382] ((7 . 7) (9 . 8) (11 . 11) (13 . 12)) 10.342 {0/0:6} B:0 3.66710 [ 3.49541] ((4 . 2) (6 . 6) (9 . 10) (11 . 12)) 10.581 {1/3:6} B:0 5.11076 [ 5.05059] ((4 . 4) (5 . 7) (6 . 8) (9 . 12)) 7.698 {2/4:6} B:0 5.11076 [ 5.05060] ((4 . 4) (5 . 7) (6 . 10) (9 . 12)) 7.841 {2/4:6} B:0 5.02250 [ 5.01016] ((1 . 4) (6 . 10) (7 . 7) (9 . 8) (11 . 12) (13 . 6)) 6.739 {2/4:15} B:2 SIMILARITY (1/min{score1}): 0.3634 [and 1/min{score2}: 0.4437] [2595, 1435]: Comparing 1isp_A and 1f8f_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 33 (17 H + 16 S) secondary structure elements in 1f8f_A, of which 13 satisfy the size requirements. 3.13337 [ 3.50411] ((2 . 4) (5 . 7) (7 . 9) (9 . 11)) 9.785 {1/4:6} B:0 3.13540 [ 3.50556] ((6 . 1) (13 . 6) (14 . 7) (15 . 9)) 12.638 {1/4:6} B:0 SIMILARITY (1/min{score1}): 0.3191 [and 1/min{score2}: 0.2854] [2595, 1447]: Comparing 1isp_A and 1f9a_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 13 (8 H + 5 S) secondary structure elements in 1f9a_A, of which 12 satisfy the size requirements. 1.57162 [ 1.71443] ((1 . 1) (2 . 2) (4 . 3) (5 . 6) (6 . 7) (7 . 8) (9 . 9)) 3.722 {0/10:21} B:0 1.83493 [ 2.00123] ((1 . 1) (2 . 2) (4 . 3) (5 . 4) (6 . 5) (11 . 9)) 7.130 {0/6:15} B:0 1.98405 [ 2.11997] ((1 . 1) (2 . 2) (4 . 3) (5 . 4) (6 . 5) (7 . 6)) 6.847 {1/7:15} B:0 2.20004 [ 2.40003] ((4 . 1) (5 . 2) (6 . 3) (7 . 4) (9 . 5)) 3.178 {0/5:10} B:0 2.50611 [ 2.64842] ((4 . 1) (5 . 2) (6 . 3) (9 . 5) (14 . 8)) 6.045 {1/5:10} B:0 SIMILARITY (1/min{score1}): 0.8128 [and 1/min{score2}: 0.7465] [2595, 1451]: Comparing 1isp_A and 1f9z_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 10 (2 H + 8 S) secondary structure elements in 1f9z_A, of which 10 satisfy the size requirements. 2.20219 [ 2.00291] ((6 . 4) (7 . 7) (9 . 8) (11 . 9) (13 . 10)) 8.846 {0/0:10} B:0 2.75010 [ 2.50014] ((1 . 6) (2 . 7) (4 . 8) (6 . 10)) 4.873 {0/2:6} B:0 2.75012 [ 2.50016] ((1 . 1) (2 . 2) (4 . 3) (6 . 5)) 5.097 {0/2:6} B:0 2.75034 [ 2.50046] ((4 . 1) (5 . 2) (6 . 3) (9 . 5)) 6.571 {0/2:6} B:0 2.75044 [ 2.50058] ((4 . 6) (5 . 7) (6 . 8) (9 . 10)) 6.988 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.4541 [and 1/min{score2}: 0.4993] [2595, 1464]: Comparing 1isp_A and 1fc6_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 29 (12 H + 17 S) secondary structure elements in 1fc6_A, of which 7 satisfy the size requirements. 3.66639 [ 3.39524] ((1 . 8) (2 . 9) (4 . 10) (6 . 14)) 7.598 {1/3:6} B:0 3.66654 [ 3.39542] ((1 . 7) (4 . 10) (5 . 12) (9 . 14)) 8.502 {1/3:6} B:0 6.71443 [ 6.67459] ((1 . 10) (5 . 12) (6 . 13) (9 . 14)) 6.532 {2/3:6} B:0 SIMILARITY (1/min{score1}): 0.2727 [and 1/min{score2}: 0.2945] [2595, 1470]: Comparing 1isp_A and 1fch_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 18 (18 H + 0 S) secondary structure elements in 1fch_A, of which 17 satisfy the size requirements. NO SIMILARITY! [2595, 1472]: Comparing 1isp_A and 1fcy_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 14 (11 H + 3 S) secondary structure elements in 1fcy_A, of which 11 satisfy the size requirements. 2.92654 [ 2.92654] ((2 . 5) (5 . 9) (7 . 10) (15 . 14)) 10.141 {1/5:6} B:0 SIMILARITY (1/min{score1}): 0.3417 [and 1/min{score2}: 0.3417] [2595, 1476]: Comparing 1isp_A and 1fdr, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 20 (8 H + 12 S) secondary structure elements in 1fdr, of which 11 satisfy the size requirements. 2.20009 [ 2.20009] ((1 . 11) (4 . 14) (6 . 18) (7 . 19) (11 . 20)) 3.948 {0/5:10} B:0 2.20010 [ 2.20010] ((1 . 11) (4 . 14) (6 . 18) (7 . 19) (9 . 20)) 4.092 {0/5:10} B:0 2.20037 [ 2.20037] ((6 . 9) (7 . 10) (9 . 11) (11 . 14) (15 . 19)) 5.652 {0/1:10} B:0 2.20102 [ 2.20102] ((1 . 11) (4 . 14) (7 . 17) (9 . 18) (11 . 20)) 7.315 {0/5:10} B:0 2.20224 [ 2.20224] ((4 . 9) (5 . 13) (6 . 14) (9 . 15) (11 . 18)) 8.896 {0/2:10} B:0 SIMILARITY (1/min{score1}): 0.8366 [and 1/min{score2}: 0.8366] [2595, 1481]: Comparing 1isp_A and 1feh_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 53 (33 H + 20 S) secondary structure elements in 1feh_A, of which 8 satisfy the size requirements. 6.06533 [ 6.01864] ((1 . 1) (2 . 3) (6 . 7) (7 . 8)) 10.426 {3/5:6} B:0 7.53380 [ 7.50960] ((1 . 1) (2 . 3) (7 . 8) (9 . 7)) 11.069 {3/4:6} B:1 SIMILARITY (1/min{score1}): 0.1649 [and 1/min{score2}: 0.1662] [2595, 1497]: Comparing 1isp_A and 1fgj_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 33 (31 H + 2 S) secondary structure elements in 1fgj_A, of which 27 satisfy the size requirements. 2.29337 [ 5.40671] ((2 . 16) (5 . 17) (7 . 21) (14 . 25) (15 . 27)) 8.298 {1/7:10} B:0 2.75487 [ 6.75033] ((2 . 12) (5 . 16) (7 . 17) (15 . 24)) 12.776 {0/4:6} B:0 2.75631 [ 6.75043] ((2 . 12) (5 . 16) (7 . 17) (15 . 23)) 13.632 {0/3:6} B:0 2.75886 [ 6.75060] ((2 . 26) (7 . 28) (14 . 31) (15 . 33)) 14.843 {0/2:6} B:0 3.13326 [ 6.78163] ((2 . 16) (5 . 17) (7 . 20) (14 . 25)) 9.533 {1/4:6} B:0 SIMILARITY (1/min{score1}): 0.4360 [and 1/min{score2}: 0.1850] [2595, 1501]: Comparing 1isp_A and 1fgy_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 10 (1 H + 9 S) secondary structure elements in 1fgy_A, of which 10 satisfy the size requirements. 2.75273 [ 2.50363] ((9 . 3) (11 . 5) (13 . 7) (15 . 10)) 11.051 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.3633 [and 1/min{score2}: 0.3994] [2595, 1508]: Comparing 1isp_A and 1fi6_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 6 (4 H + 2 S) secondary structure elements in 1fi6_A, of which 6 satisfy the size requirements. NO SIMILARITY! [2595, 1513]: Comparing 1isp_A and 1fj2_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 19 (10 H + 9 S) secondary structure elements in 1fj2_A, of which 17 satisfy the size requirements. 1.10010 [ 1.70003] ((1 . 3) (2 . 4) (4 . 5) (5 . 9) (6 . 11) (7 . 12) (9 . 13) (11 . 15) (13 . 18) (15 . 19)) 2.424 {0/26:45} B:0 1.37511 [ 2.12503] ((1 . 5) (5 . 9) (6 . 11) (7 . 12) (9 . 13) (11 . 15) (13 . 18) (15 . 19)) 2.934 {0/13:28} B:0 1.57403 [ 2.42928] ((1 . 3) (2 . 4) (4 . 5) (9 . 11) (11 . 13) (13 . 15) (15 . 16)) 7.175 {0/11:21} B:0 1.83752 [ 2.83447] ((2 . 4) (4 . 5) (5 . 7) (9 . 11) (11 . 13) (13 . 15)) 9.077 {0/10:15} B:0 2.20131 [ 3.40035] ((2 . 9) (4 . 11) (6 . 13) (9 . 15) (11 . 18)) 7.776 {0/4:10} B:0 SIMILARITY (1/min{score1}): 0.9090 [and 1/min{score2}: 0.5911] [2595, 1514]: Comparing 1isp_A and 1fj7_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 6 (2 H + 4 S) secondary structure elements in 1fj7_A, of which 6 satisfy the size requirements. 2.75089 [ 1.50547] ((9 . 1) (11 . 3) (13 . 4) (15 . 5)) 8.351 {0/0:6} B:0 7.53372 [ 7.50306] ((2 . 2) (4 . 4) (5 . 5) (6 . 6)) 9.016 {3/4:6} B:0 3.66657 [ 3.36755] ((11 . 1) (13 . 3) (14 . 2) (15 . 5)) 8.644 {1/3:6} B:1 5.11093 [ 5.01039] ((1 . 3) (2 . 2) (4 . 4) (5 . 5)) 9.929 {1/2:6} B:1 2.75034 [ 1.50211] ((9 . 6) (11 . 4) (13 . 3) (15 . 5)) 6.573 {0/0:6} B:2 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.6657] [2595, 1577]: Comparing 1isp_A and 1fno_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 31 (14 H + 17 S) secondary structure elements in 1fno_A, of which 16 satisfy the size requirements. 2.75026 [ 4.00008] ((2 . 2) (4 . 3) (6 . 5) (14 . 11)) 6.107 {0/2:6} B:0 2.75078 [ 4.00025] ((2 . 2) (4 . 3) (6 . 5) (13 . 12)) 8.074 {0/1:6} B:0 2.75156 [ 4.00051] ((2 . 2) (6 . 5) (11 . 10) (14 . 11)) 9.607 {0/4:6} B:0 2.75294 [ 4.00096] ((1 . 10) (2 . 11) (4 . 12) (6 . 15)) 11.256 {0/3:6} B:0 10.01432 [10.06345] ((1 . 5) (5 . 9) (7 . 11) (9 . 12)) 10.804 {2/2:6} B:0 SIMILARITY (1/min{score1}): 0.3857 [and 1/min{score2}: 0.3504] [2595, 1591]: Comparing 1isp_A and 1fob_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 20 (12 H + 8 S) secondary structure elements in 1fob_A, of which 18 satisfy the size requirements. 2.20010 [ 3.60002] ((1 . 11) (4 . 14) (5 . 15) (6 . 16) (9 . 19)) 4.093 {0/5:10} B:0 2.20011 [ 3.60003] ((1 . 1) (5 . 3) (6 . 4) (9 . 6) (13 . 8)) 4.185 {0/6:10} B:0 2.20015 [ 3.60003] ((2 . 5) (5 . 7) (6 . 8) (11 . 11) (13 . 14)) 4.534 {0/7:10} B:0 2.20018 [ 3.60004] ((4 . 1) (5 . 3) (6 . 4) (9 . 6) (13 . 8)) 4.741 {0/7:10} B:0 2.20027 [ 3.60006] ((2 . 10) (5 . 12) (6 . 14) (11 . 16) (13 . 19)) 5.217 {0/8:10} B:0 SIMILARITY (1/min{score1}): 0.8166 [and 1/min{score2}: 0.4999] [2595, 1595]: Comparing 1isp_A and 1fp1_D, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 28 (17 H + 11 S) secondary structure elements in 1fp1_D, of which 8 satisfy the size requirements. NO SIMILARITY! [2595, 1604]: Comparing 1isp_A and 1fpz_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 16 (9 H + 7 S) secondary structure elements in 1fpz_A, of which 13 satisfy the size requirements. 2.20004 [ 2.60002] ((4 . 3) (5 . 6) (6 . 7) (7 . 9) (9 . 10)) 3.224 {0/6:10} B:0 2.20068 [ 2.60041] ((4 . 3) (5 . 6) (7 . 9) (9 . 10) (11 . 12)) 6.600 {0/6:10} B:0 2.36242 [ 2.70350] ((4 . 3) (5 . 6) (6 . 7) (9 . 10) (14 . 13)) 4.488 {1/6:10} B:0 2.36377 [ 2.70440] ((5 . 6) (6 . 7) (9 . 10) (13 . 12) (14 . 13)) 8.443 {1/6:10} B:0 2.75003 [ 3.25002] ((9 . 3) (11 . 7) (13 . 10) (15 . 11)) 3.597 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.7272 [and 1/min{score2}: 0.6153] [2595, 1622]: Comparing 1isp_A and 1fsz, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 25 (13 H + 12 S) secondary structure elements in 1fsz, of which 9 satisfy the size requirements. 2.20139 [ 1.80254] ((1 . 18) (2 . 19) (4 . 20) (5 . 21) (6 . 22)) 7.898 {0/3:10} B:0 2.75034 [ 2.25062] ((7 . 17) (9 . 18) (11 . 20) (14 . 21)) 6.569 {0/2:6} B:0 2.75041 [ 2.25074] ((7 . 17) (9 . 18) (13 . 20) (14 . 21)) 6.868 {0/2:6} B:0 2.75194 [ 2.25353] ((1 . 20) (2 . 21) (4 . 22) (6 . 25)) 10.140 {0/3:6} B:0 3.48159 [ 3.40234] ((2 . 17) (4 . 18) (5 . 19) (6 . 20) (9 . 22)) 7.480 {2/6:10} B:0 SIMILARITY (1/min{score1}): 0.5042 [and 1/min{score2}: 0.5736] [2595, 1624]: Comparing 1isp_A and 1ft9_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 18 (7 H + 11 S) secondary structure elements in 1ft9_A, of which 11 satisfy the size requirements. 3.13388 [ 3.13388] ((4 . 2) (6 . 5) (9 . 8) (14 . 11)) 10.735 {1/4:6} B:0 3.66697 [ 3.66697] ((2 . 1) (4 . 2) (9 . 8) (14 . 11)) 10.204 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.3191 [and 1/min{score2}: 0.3191] [2595, 1643]: Comparing 1isp_A and 1fwx_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 52 (10 H + 42 S) secondary structure elements in 1fwx_A, of which 37 satisfy the size requirements. 2.20058 [ 7.40002] ((4 . 28) (6 . 32) (9 . 34) (11 . 37) (13 . 39)) 6.351 {0/5:10} B:0 2.20177 [ 7.40005] ((1 . 15) (4 . 17) (6 . 20) (11 . 26) (13 . 28)) 8.385 {0/4:10} B:0 2.75008 [ 9.25000] ((4 . 20) (6 . 26) (11 . 32) (13 . 34)) 4.507 {0/4:6} B:0 2.75015 [ 9.25000] ((1 . 1) (4 . 3) (9 . 8) (13 . 12)) 5.316 {0/3:6} B:0 2.75018 [ 9.25000] ((4 . 34) (6 . 37) (9 . 39) (11 . 41)) 5.583 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.5453 [and 1/min{score2}: 0.1854] [2595, 1644]: Comparing 1isp_A and 1fwx_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 52 (10 H + 42 S) secondary structure elements in 1fwx_A, of which 10 satisfy the size requirements. 2.75136 [ 2.50181] ((6 . 46) (9 . 48) (11 . 50) (13 . 52)) 9.276 {0/0:6} B:0 2.75154 [ 2.50205] ((5 . 42) (6 . 43) (9 . 46) (13 . 50)) 9.580 {0/4:6} B:0 5.11078 [ 5.07649] ((4 . 44) (6 . 48) (9 . 51) (11 . 52)) 8.207 {1/2:6} B:0 2.28779 [ 2.20905] ((1 . 43) (6 . 44) (7 . 42) (9 . 47) (11 . 50) (13 . 51)) 8.940 {1/5:15} B:1 2.75128 [ 2.50170] ((4 . 44) (9 . 51) (11 . 46) (13 . 52)) 9.140 {0/1:6} B:1 SIMILARITY (1/min{score1}): 0.4371 [and 1/min{score2}: 0.4527] [2595, 1665]: Comparing 1isp_A and 1fzr_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 13 (5 H + 8 S) secondary structure elements in 1fzr_A, of which 9 satisfy the size requirements. 2.20018 [ 1.80033] ((6 . 6) (7 . 7) (9 . 8) (11 . 10) (15 . 11)) 4.748 {0/0:10} B:0 2.75004 [ 2.25007] ((6 . 6) (7 . 7) (9 . 8) (11 . 10)) 3.784 {0/0:6} B:0 2.75010 [ 2.25018] ((1 . 6) (4 . 8) (5 . 9) (6 . 10)) 4.842 {0/0:6} B:0 2.75055 [ 2.25100] ((1 . 6) (2 . 7) (4 . 8) (5 . 9)) 7.394 {0/0:6} B:0 5.02246 [ 5.01011] ((1 . 6) (5 . 7) (6 . 8) (7 . 9) (9 . 10) (15 . 11)) 4.796 {2/4:15} B:0 SIMILARITY (1/min{score1}): 0.4545 [and 1/min{score2}: 0.5555] [2595, 1690]: Comparing 1isp_A and 1g1l_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 29 (15 H + 14 S) secondary structure elements in 1g1l_A, of which 22 satisfy the size requirements. 1.83437 [ 3.66680] ((1 . 1) (2 . 7) (4 . 8) (5 . 9) (9 . 13) (11 . 16)) 6.404 {0/7:15} B:0 2.20012 [ 4.40002] ((1 . 8) (2 . 9) (4 . 11) (5 . 12) (6 . 13)) 4.296 {0/5:10} B:0 2.20041 [ 4.40005] ((2 . 7) (4 . 8) (5 . 12) (6 . 13) (11 . 19)) 5.802 {0/5:10} B:0 2.20067 [ 4.40008] ((2 . 7) (4 . 11) (5 . 12) (6 . 13) (11 . 19)) 6.565 {0/5:10} B:0 2.20097 [ 4.40012] ((1 . 8) (2 . 9) (4 . 11) (5 . 12) (7 . 15)) 7.209 {0/6:10} B:0 SIMILARITY (1/min{score1}): 0.7256 [and 1/min{score2}: 0.4051] [2595, 1692]: Comparing 1isp_A and 1g1t_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 15 (3 H + 12 S) secondary structure elements in 1g1t_A, of which 9 satisfy the size requirements. 3.13266 [ 2.83661] ((2 . 4) (4 . 7) (6 . 8) (9 . 10)) 7.642 {1/4:6} B:0 3.13302 [ 2.83710] ((2 . 4) (4 . 7) (6 . 9) (9 . 10)) 8.927 {1/4:6} B:0 5.11070 [ 5.05054] ((2 . 4) (4 . 5) (6 . 8) (9 . 10)) 6.453 {2/4:6} B:0 2.75035 [ 2.25064] ((1 . 5) (2 . 4) (4 . 7) (9 . 10)) 6.624 {0/3:6} B:1 3.66641 [ 3.49460] ((2 . 4) (6 . 5) (7 . 2) (11 . 10)) 7.696 {1/3:6} B:1 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.4443] [2595, 1724]: Comparing 1isp_A and 1g4u_S, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 23 (14 H + 9 S) secondary structure elements in 1g4u_S, of which 8 satisfy the size requirements. NO SIMILARITY! [2595, 1731]: Comparing 1isp_A and 1g5c_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 13 (8 H + 5 S) secondary structure elements in 1g5c_A, of which 11 satisfy the size requirements. 1.83355 [ 1.83355] ((1 . 3) (2 . 5) (4 . 6) (5 . 7) (6 . 8) (11 . 12)) 4.332 {0/9:15} B:0 2.20219 [ 2.20219] ((1 . 6) (2 . 7) (4 . 8) (7 . 11) (9 . 12)) 8.844 {0/4:10} B:0 2.41880 [ 2.41880] ((1 . 3) (2 . 5) (4 . 6) (5 . 7) (6 . 8) (7 . 11) (9 . 12) (11 . 13)) 4.013 {4/17:28} B:0 2.75025 [ 2.75025] ((5 . 5) (6 . 6) (9 . 8) (15 . 11)) 6.092 {0/3:6} B:0 2.75035 [ 2.75035] ((4 . 3) (5 . 7) (6 . 8) (13 . 12)) 6.632 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.6363 [and 1/min{score2}: 0.6363] [2595, 1736]: Comparing 1isp_A and 1g5t_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 12 (6 H + 6 S) secondary structure elements in 1g5t_A, of which 12 satisfy the size requirements. 1.83354 [ 2.00016] ((1 . 3) (4 . 5) (5 . 6) (6 . 7) (9 . 10) (11 . 12)) 4.286 {0/4:15} B:0 1.83419 [ 2.00066] ((1 . 3) (5 . 6) (6 . 7) (7 . 9) (9 . 10) (11 . 12)) 6.100 {0/2:15} B:0 2.20109 [ 2.40084] ((5 . 2) (6 . 3) (7 . 4) (9 . 5) (11 . 7)) 7.421 {0/1:10} B:0 2.20132 [ 2.40102] ((2 . 2) (6 . 5) (7 . 6) (11 . 7) (13 . 10)) 7.794 {0/1:10} B:0 2.20217 [ 2.40167] ((5 . 2) (6 . 3) (7 . 4) (9 . 5) (13 . 7)) 8.824 {0/1:10} B:0 SIMILARITY (1/min{score1}): 0.7948 [and 1/min{score2}: 0.7345] [2595, 1738]: Comparing 1isp_A and 1g61_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 25 (10 H + 15 S) secondary structure elements in 1g61_A, of which 19 satisfy the size requirements. 2.20039 [ 3.80008] ((1 . 4) (2 . 5) (4 . 6) (5 . 10) (9 . 14)) 5.759 {0/2:10} B:0 2.20045 [ 3.80009] ((1 . 4) (2 . 5) (4 . 6) (5 . 10) (6 . 11)) 5.957 {0/3:10} B:0 2.20060 [ 3.80012] ((1 . 14) (2 . 16) (4 . 17) (5 . 20) (6 . 21)) 6.395 {0/3:10} B:0 2.20186 [ 3.80036] ((4 . 4) (5 . 5) (6 . 9) (9 . 11) (13 . 17)) 8.488 {0/6:10} B:0 2.20192 [ 3.80037] ((1 . 4) (2 . 5) (4 . 9) (5 . 10) (6 . 11)) 8.558 {0/2:10} B:0 SIMILARITY (1/min{score1}): 0.8006 [and 1/min{score2}: 0.4725] [2595, 1747]: Comparing 1isp_A and 1g72_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 52 (14 H + 38 S) secondary structure elements in 1g72_A, of which 46 satisfy the size requirements. 2.20029 [ 9.20000] ((4 . 4) (6 . 6) (9 . 8) (11 . 11) (13 . 13)) 5.344 {0/4:10} B:0 2.20179 [ 9.20002] ((2 . 20) (6 . 25) (9 . 28) (11 . 30) (13 . 32)) 8.415 {0/4:10} B:0 2.75009 [11.50000] ((6 . 11) (9 . 13) (11 . 16) (13 . 19)) 4.696 {0/1:6} B:0 2.75020 [11.50000] ((6 . 4) (9 . 6) (11 . 8) (13 . 11)) 5.732 {0/1:6} B:0 2.75020 [11.50000] ((1 . 15) (4 . 18) (9 . 24) (11 . 27)) 5.763 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.4545 [and 1/min{score2}: 0.1451] [2595, 1756]: Comparing 1isp_A and 1g7s_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 52 (18 H + 34 S) secondary structure elements in 1g7s_A, of which 11 satisfy the size requirements. 2.75142 [ 2.75142] ((6 . 23) (9 . 26) (11 . 29) (13 . 31)) 9.378 {0/1:6} B:0 3.66632 [ 3.66632] ((4 . 22) (6 . 27) (9 . 30) (11 . 31)) 6.987 {1/3:6} B:0 3.66646 [ 3.66646] ((4 . 22) (6 . 26) (9 . 30) (11 . 31)) 8.055 {1/3:6} B:0 3.13265 [ 3.13265] ((1 . 23) (4 . 22) (11 . 25) (13 . 31)) 7.616 {1/4:6} B:1 4.08887 [ 4.08887] ((4 . 22) (6 . 27) (9 . 30) (11 . 23) (13 . 31)) 8.847 {2/5:10} B:1 SIMILARITY (1/min{score1}): 0.3634 [and 1/min{score2}: 0.3634] [2595, 1759]: Comparing 1isp_A and 1g86_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 14 (2 H + 12 S) secondary structure elements in 1g86_A, of which 11 satisfy the size requirements. 2.75077 [ 2.75077] ((6 . 2) (9 . 5) (11 . 8) (13 . 10)) 8.056 {0/1:6} B:0 2.75078 [ 2.75078] ((1 . 4) (4 . 6) (6 . 11) (9 . 14)) 8.075 {0/2:6} B:0 2.75114 [ 2.75114] ((6 . 6) (9 . 9) (11 . 13) (13 . 14)) 8.874 {0/1:6} B:0 3.66637 [ 3.66637] ((1 . 4) (4 . 6) (6 . 10) (9 . 14)) 7.425 {1/3:6} B:0 5.04624 [ 5.04624] ((1 . 5) (4 . 6) (6 . 4) (9 . 2) (11 . 9)) 5.593 {1/2:10} B:2 SIMILARITY (1/min{score1}): 0.3635 [and 1/min{score2}: 0.3635] [2595, 1761]: Comparing 1isp_A and 1g8a_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 20 (7 H + 13 S) secondary structure elements in 1g8a_A, of which 18 satisfy the size requirements. 1.57165 [ 2.57148] ((1 . 7) (2 . 8) (4 . 9) (5 . 12) (6 . 13) (9 . 16) (11 . 19)) 3.885 {0/9:21} B:0 1.83356 [ 3.00005] ((1 . 7) (4 . 11) (5 . 12) (6 . 13) (9 . 16) (11 . 19)) 4.392 {0/7:15} B:0 1.83359 [ 3.00006] ((1 . 9) (2 . 10) (4 . 11) (5 . 12) (6 . 13) (7 . 14)) 4.526 {0/9:15} B:0 1.83530 [ 3.00045] ((1 . 7) (4 . 9) (5 . 10) (9 . 13) (11 . 16) (13 . 19)) 7.508 {0/7:15} B:0 2.20047 [ 3.60011] ((2 . 6) (5 . 10) (9 . 13) (11 . 16) (13 . 19)) 6.025 {0/7:10} B:0 SIMILARITY (1/min{score1}): 0.7271 [and 1/min{score2}: 0.4824] [2595, 1763]: Comparing 1isp_A and 1g8f_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 40 (22 H + 18 S) secondary structure elements in 1g8f_A, of which 12 satisfy the size requirements. 2.75224 [ 3.00173] ((2 . 8) (4 . 9) (7 . 12) (9 . 13)) 10.520 {0/4:6} B:0 7.53368 [ 7.54756] ((1 . 3) (2 . 4) (6 . 9) (9 . 10)) 6.232 {3/4:6} B:0 5.11086 [ 5.15487] ((4 . 3) (6 . 7) (7 . 4) (11 . 13)) 9.182 {2/4:6} B:1 6.68639 [ 6.69453] ((2 . 4) (4 . 9) (6 . 10) (9 . 13) (15 . 1)) 7.610 {4/6:10} B:1 2.75119 [ 3.00091] ((2 . 8) (7 . 4) (9 . 13) (15 . 6)) 8.968 {0/3:6} B:2 SIMILARITY (1/min{score1}): 0.3635 [and 1/min{score2}: 0.3332] [2595, 1776]: Comparing 1isp_A and 1g97_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 56 (14 H + 42 S) secondary structure elements in 1g97_A, of which 19 satisfy the size requirements. 1.83440 [ 3.16687] ((1 . 1) (2 . 6) (4 . 7) (5 . 8) (9 . 12) (11 . 14)) 6.447 {0/7:15} B:0 2.20016 [ 3.80003] ((2 . 6) (4 . 7) (5 . 10) (6 . 12) (9 . 14)) 4.571 {0/6:10} B:0 2.20043 [ 3.80008] ((1 . 1) (2 . 6) (5 . 8) (7 . 10) (9 . 12)) 5.900 {0/5:10} B:0 2.20080 [ 3.80016] ((1 . 1) (2 . 6) (4 . 7) (5 . 8) (6 . 12)) 6.879 {0/3:10} B:0 2.20099 [ 3.80019] ((1 . 1) (5 . 6) (7 . 10) (9 . 12) (11 . 14)) 7.259 {0/4:10} B:0 SIMILARITY (1/min{score1}): 0.6361 [and 1/min{score2}: 0.4308] [2595, 1777]: Comparing 1isp_A and 1g97_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 56 (14 H + 42 S) secondary structure elements in 1g97_A, of which 11 satisfy the size requirements. 2.20014 [ 2.20014] ((1 . 31) (6 . 34) (9 . 37) (11 . 43) (13 . 46)) 4.410 {0/0:10} B:0 2.75007 [ 2.75007] ((6 . 34) (9 . 37) (11 . 43) (13 . 46)) 4.477 {0/0:6} B:0 2.75008 [ 2.75008] ((6 . 31) (9 . 34) (11 . 37) (13 . 43)) 4.511 {0/0:6} B:0 2.75014 [ 2.75014] ((6 . 34) (9 . 37) (11 . 43) (13 . 47)) 5.225 {0/1:6} B:0 2.75019 [ 2.75019] ((6 . 42) (9 . 45) (11 . 49) (13 . 52)) 5.645 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.4545 [and 1/min{score2}: 0.4545] [2595, 1778]: Comparing 1isp_A and 1g99_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 33 (19 H + 14 S) secondary structure elements in 1g99_A, of which 11 satisfy the size requirements. 2.20016 [ 2.20016] ((1 . 1) (4 . 3) (5 . 6) (9 . 8) (13 . 12)) 4.616 {0/5:10} B:0 2.75005 [ 2.75005] ((9 . 1) (11 . 3) (13 . 5) (15 . 6)) 4.019 {0/0:6} B:0 2.75009 [ 2.75009] ((1 . 3) (5 . 6) (6 . 8) (11 . 12)) 4.752 {0/3:6} B:0 2.75022 [ 2.75022] ((6 . 1) (9 . 2) (11 . 4) (13 . 5)) 5.870 {0/1:6} B:0 2.75026 [ 2.75026] ((4 . 5) (5 . 6) (6 . 8) (11 . 12)) 6.114 {0/4:6} B:0 SIMILARITY (1/min{score1}): 0.5042 [and 1/min{score2}: 0.5042] [2595, 1793]: Comparing 1isp_A and 1gci, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 18 (9 H + 9 S) secondary structure elements in 1gci, of which 18 satisfy the size requirements. 1.01618 [ 1.64013] ((1 . 3) (2 . 5) (4 . 6) (5 . 7) (6 . 8) (7 . 9) (9 . 10) (11 . 11) (13 . 12) (14 . 15) (15 . 18)) 6.690 {1/23:55} B:0 1.10109 [ 1.80025] ((1 . 3) (2 . 5) (4 . 6) (5 . 7) (6 . 8) (7 . 9) (9 . 10) (11 . 11) (13 . 12) (15 . 15)) 4.416 {0/18:45} B:0 1.11074 [ 1.80248] ((1 . 3) (2 . 5) (4 . 6) (5 . 7) (6 . 8) (9 . 10) (11 . 11) (13 . 12) (14 . 15) (15 . 18)) 6.183 {1/23:45} B:0 1.57195 [ 2.57155] ((1 . 4) (2 . 5) (4 . 6) (5 . 7) (6 . 8) (9 . 10) (15 . 15)) 4.809 {0/11:21} B:0 1.83342 [ 3.00002] ((1 . 3) (2 . 5) (9 . 8) (11 . 10) (13 . 11) (15 . 15)) 3.470 {0/6:15} B:0 SIMILARITY (1/min{score1}): 0.9841 [and 1/min{score2}: 0.6097] [2595, 1796]: Comparing 1isp_A and 1gcv_B, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 7 (7 H + 0 S) secondary structure elements in 1gcv_B, of which 7 satisfy the size requirements. NO SIMILARITY! [2595, 1805]: Comparing 1isp_A and 1gdn_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 18 (4 H + 14 S) secondary structure elements in 1gdn_A, of which 16 satisfy the size requirements. 2.75045 [ 4.00015] ((6 . 3) (7 . 5) (9 . 7) (11 . 9)) 7.028 {0/1:6} B:0 2.75050 [ 4.00016] ((6 . 3) (7 . 5) (9 . 7) (11 . 10)) 7.239 {0/1:6} B:0 2.75099 [ 4.00032] ((1 . 4) (4 . 9) (11 . 14) (15 . 18)) 8.566 {0/2:6} B:0 2.75155 [ 4.00051] ((5 . 5) (9 . 10) (13 . 12) (14 . 13)) 9.596 {0/4:6} B:0 2.75198 [ 4.00064] ((4 . 3) (5 . 5) (13 . 12) (14 . 13)) 10.197 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.2500] [2595, 1808]: Comparing 1isp_A and 1gef_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 13 (6 H + 7 S) secondary structure elements in 1gef_A, of which 9 satisfy the size requirements. 2.20048 [ 1.80088] ((2 . 1) (4 . 5) (5 . 7) (6 . 8) (9 . 10)) 6.065 {0/6:10} B:0 2.75107 [ 2.25196] ((5 . 1) (6 . 2) (9 . 5) (11 . 8)) 8.744 {0/2:6} B:0 5.11072 [ 5.05056] ((4 . 5) (5 . 7) (6 . 9) (9 . 10)) 6.960 {2/4:6} B:0 2.20073 [ 1.80132] ((1 . 2) (2 . 1) (4 . 5) (5 . 7) (6 . 8)) 6.709 {0/3:10} B:1 3.66774 [ 3.65057] ((1 . 4) (2 . 1) (4 . 2) (6 . 5) (7 . 7) (9 . 8) (11 . 9)) 5.606 {4/11:21} B:1 SIMILARITY (1/min{score1}): 0.4544 [and 1/min{score2}: 0.5553] [2595, 1817]: Comparing 1isp_A and 1gg3_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 21 (10 H + 11 S) secondary structure elements in 1gg3_A, of which 8 satisfy the size requirements. NO SIMILARITY! [2595, 1867]: Comparing 1isp_A and 1glq_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 15 (11 H + 4 S) secondary structure elements in 1glq_A, of which 7 satisfy the size requirements. 1.83346 [ 1.16716] ((1 . 1) (2 . 2) (4 . 3) (6 . 6) (9 . 7) (15 . 8)) 3.777 {0/3:15} B:0 2.75002 [ 1.75009] ((1 . 1) (2 . 2) (4 . 3) (6 . 7)) 3.342 {0/2:6} B:0 2.75068 [ 1.75262] ((9 . 1) (11 . 3) (13 . 7) (14 . 8)) 7.790 {0/1:6} B:0 2.75070 [ 1.75273] ((9 . 1) (11 . 3) (13 . 6) (15 . 8)) 7.871 {0/0:6} B:0 2.75097 [ 1.75375] ((1 . 1) (2 . 2) (4 . 3) (5 . 8)) 8.527 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.5454 [and 1/min{score2}: 0.8568] [2595, 1894]: Comparing 1isp_A and 1gp6_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 30 (16 H + 14 S) secondary structure elements in 1gp6_A, of which 22 satisfy the size requirements. 2.75057 [ 5.50007] ((2 . 15) (6 . 18) (9 . 20) (13 . 25)) 7.466 {0/3:6} B:0 2.75228 [ 5.50029] ((1 . 18) (4 . 20) (9 . 26) (14 . 30)) 10.565 {0/1:6} B:0 2.75320 [ 5.50040] ((4 . 11) (7 . 15) (11 . 18) (13 . 20)) 11.500 {0/3:6} B:0 2.75331 [ 5.50041] ((2 . 8) (6 . 12) (7 . 15) (13 . 19)) 11.593 {0/5:6} B:0 2.75519 [ 5.50065] ((1 . 5) (4 . 7) (7 . 9) (9 . 11)) 12.979 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.3856 [and 1/min{score2}: 0.2925] [2595, 1896]: Comparing 1isp_A and 1gpe_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 52 (26 H + 26 S) secondary structure elements in 1gpe_A, of which 23 satisfy the size requirements. 2.75035 [ 5.75004] ((1 . 3) (2 . 4) (4 . 5) (13 . 14)) 6.626 {0/3:6} B:0 2.75069 [ 5.75008] ((1 . 3) (2 . 4) (4 . 5) (11 . 14)) 7.820 {0/3:6} B:0 2.75961 [ 5.75106] ((4 . 3) (5 . 4) (6 . 5) (15 . 15)) 15.151 {0/3:6} B:0 2.76233 [ 5.75136] ((1 . 3) (2 . 4) (4 . 5) (15 . 18)) 16.129 {0/3:6} B:0 2.76360 [ 5.75150] ((4 . 3) (5 . 4) (14 . 15) (15 . 18)) 16.533 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.7174 [and 1/min{score2}: 0.3859] [2595, 1897]: Comparing 1isp_A and 1gpe_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 52 (26 H + 26 S) secondary structure elements in 1gpe_A, of which 14 satisfy the size requirements. 2.75198 [ 3.50096] ((6 . 34) (7 . 35) (13 . 40) (15 . 44)) 10.190 {0/2:6} B:0 2.75284 [ 3.50138] ((6 . 34) (7 . 36) (13 . 40) (15 . 44)) 11.163 {0/2:6} B:0 2.75486 [ 3.50236] ((7 . 37) (11 . 40) (13 . 43) (15 . 44)) 12.766 {0/0:6} B:0 2.75552 [ 3.50268] ((4 . 32) (7 . 38) (13 . 43) (15 . 44)) 13.179 {0/1:6} B:0 3.66685 [ 4.06727] ((1 . 34) (5 . 38) (6 . 40) (13 . 46)) 9.794 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.3634 [and 1/min{score2}: 0.3157] [2595, 1908]: Comparing 1isp_A and 1gpu_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 51 (31 H + 20 S) secondary structure elements in 1gpu_A, of which 18 satisfy the size requirements. 1.83358 [ 3.00006] ((1 . 3) (6 . 7) (7 . 8) (11 . 10) (13 . 15) (15 . 16)) 4.479 {0/6:15} B:0 1.83390 [ 3.00013] ((1 . 3) (5 . 6) (7 . 8) (11 . 10) (13 . 15) (15 . 16)) 5.507 {0/7:15} B:0 1.89264 [ 3.01411] ((1 . 3) (2 . 4) (7 . 8) (11 . 10) (13 . 15) (15 . 16)) 5.063 {1/9:15} B:0 1.92541 [ 3.02240] ((1 . 3) (2 . 4) (9 . 7) (11 . 10) (13 . 15) (15 . 16)) 4.237 {1/8:15} B:0 2.20012 [ 3.60003] ((1 . 10) (2 . 14) (4 . 15) (5 . 16) (6 . 17)) 4.290 {0/0:10} B:0 SIMILARITY (1/min{score1}): 0.8176 [and 1/min{score2}: 0.5309] [2595, 1909]: Comparing 1isp_A and 1gpu_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 51 (31 H + 20 S) secondary structure elements in 1gpu_A, of which 14 satisfy the size requirements. 2.20058 [ 2.80028] ((7 . 24) (9 . 25) (11 . 29) (13 . 31) (14 . 32)) 6.355 {0/4:10} B:0 2.20092 [ 2.80045] ((2 . 30) (4 . 31) (7 . 36) (9 . 37) (11 . 39)) 7.127 {0/6:10} B:0 2.20117 [ 2.80057] ((2 . 30) (4 . 31) (6 . 34) (9 . 37) (11 . 39)) 7.566 {0/5:10} B:0 2.75005 [ 3.50003] ((1 . 34) (4 . 37) (5 . 38) (6 . 39)) 4.095 {0/0:6} B:0 2.75032 [ 3.50015] ((7 . 23) (11 . 25) (13 . 29) (15 . 30)) 6.458 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.8630 [and 1/min{score2}: 0.7350] [2595, 1913]: Comparing 1isp_A and 1gq8_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 34 (9 H + 25 S) secondary structure elements in 1gq8_A, of which 27 satisfy the size requirements. 2.20004 [ 5.40000] ((4 . 4) (6 . 7) (9 . 10) (11 . 14) (13 . 17)) 3.238 {0/3:10} B:0 2.20005 [ 5.40000] ((1 . 5) (6 . 9) (9 . 12) (11 . 15) (13 . 18)) 3.513 {0/2:10} B:0 2.20007 [ 5.40000] ((1 . 10) (6 . 14) (9 . 17) (11 . 20) (13 . 23)) 3.677 {0/1:10} B:0 2.20012 [ 5.40001] ((6 . 1) (7 . 2) (9 . 3) (11 . 6) (13 . 13)) 4.272 {0/1:10} B:0 2.20020 [ 5.40001] ((4 . 9) (6 . 14) (9 . 17) (11 . 20) (13 . 23)) 4.880 {0/4:10} B:0 SIMILARITY (1/min{score1}): 0.6362 [and 1/min{score2}: 0.2593] [2595, 1944]: Comparing 1isp_A and 1gt9_1, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 30 (13 H + 17 S) secondary structure elements in 1gt9_1, of which 21 satisfy the size requirements. 1.10282 [ 2.10041] ((1 . 3) (2 . 6) (4 . 7) (5 . 8) (6 . 9) (7 . 12) (9 . 13) (11 . 16) (13 . 22) (15 . 25)) 5.605 {0/17:45} B:0 1.83386 [ 3.50008] ((1 . 5) (2 . 6) (4 . 7) (5 . 8) (6 . 9) (9 . 13)) 5.393 {0/7:15} B:0 2.20040 [ 4.20006] ((2 . 2) (5 . 4) (9 . 7) (11 . 9) (13 . 13)) 5.763 {0/7:10} B:0 2.20053 [ 4.20008] ((2 . 6) (5 . 8) (6 . 9) (7 . 12) (13 . 16)) 6.216 {0/5:10} B:0 2.20267 [ 4.20038] ((1 . 7) (2 . 8) (4 . 9) (6 . 13) (13 . 22)) 9.293 {0/5:10} B:0 SIMILARITY (1/min{score1}): 0.9068 [and 1/min{score2}: 0.4761] [2595, 1957]: Comparing 1isp_A and 1gud_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 22 (10 H + 12 S) secondary structure elements in 1gud_A, of which 22 satisfy the size requirements. 1.83345 [ 3.66668] ((1 . 1) (2 . 2) (4 . 3) (5 . 4) (6 . 7) (9 . 9)) 3.732 {0/6:15} B:0 1.83351 [ 3.66669] ((1 . 1) (2 . 2) (4 . 3) (5 . 4) (6 . 5) (9 . 9)) 4.130 {0/6:15} B:0 2.20010 [ 4.40001] ((2 . 2) (4 . 3) (5 . 6) (6 . 7) (9 . 9)) 4.062 {0/5:10} B:0 2.20016 [ 4.40002] ((2 . 12) (4 . 13) (6 . 17) (7 . 18) (9 . 19)) 4.630 {0/5:10} B:0 2.20147 [ 4.40018] ((5 . 2) (6 . 3) (9 . 5) (11 . 7) (13 . 9)) 8.003 {0/4:10} B:0 SIMILARITY (1/min{score1}): 0.9083 [and 1/min{score2}: 0.4545] [2595, 1961]: Comparing 1isp_A and 1guq_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 26 (11 H + 15 S) secondary structure elements in 1guq_A, of which 11 satisfy the size requirements. 2.75027 [ 2.75027] ((1 . 14) (4 . 16) (5 . 18) (6 . 19)) 6.169 {0/1:6} B:0 2.75119 [ 2.75119] ((7 . 12) (11 . 14) (13 . 16) (15 . 18)) 8.983 {0/0:6} B:0 2.75126 [ 2.75126] ((7 . 12) (9 . 14) (11 . 16) (15 . 18)) 9.099 {0/0:6} B:0 2.75192 [ 2.75192] ((4 . 15) (7 . 18) (11 . 21) (14 . 25)) 10.112 {0/3:6} B:0 3.13406 [ 3.13406] ((4 . 14) (7 . 18) (9 . 19) (14 . 25)) 11.005 {1/4:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.3636] [2595, 1967]: Comparing 1isp_A and 1gv8_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 16 (9 H + 7 S) secondary structure elements in 1gv8_A, of which 14 satisfy the size requirements. 2.20008 [ 2.80004] ((1 . 3) (2 . 4) (4 . 7) (7 . 9) (9 . 10)) 3.908 {0/5:10} B:0 2.20017 [ 2.80008] ((1 . 3) (2 . 4) (7 . 9) (9 . 10) (13 . 16)) 4.639 {0/4:10} B:0 2.50639 [ 2.96708] ((1 . 3) (2 . 4) (5 . 6) (7 . 9) (9 . 10)) 7.042 {1/5:10} B:0 2.75020 [ 3.50010] ((6 . 1) (9 . 3) (11 . 7) (15 . 9)) 5.732 {0/0:6} B:0 2.75041 [ 3.50020] ((2 . 8) (5 . 11) (6 . 13) (7 . 15)) 6.882 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.4612 [and 1/min{score2}: 0.4204] [2595, 1972]: Comparing 1isp_A and 1gvh_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 27 (15 H + 12 S) secondary structure elements in 1gvh_A, of which 9 satisfy the size requirements. 2.20029 [ 1.80052] ((6 . 16) (7 . 17) (9 . 18) (13 . 20) (15 . 25)) 5.318 {0/0:10} B:0 2.20074 [ 1.80135] ((1 . 16) (2 . 17) (5 . 19) (9 . 24) (11 . 27)) 6.741 {0/3:10} B:0 2.75003 [ 2.25005] ((1 . 18) (6 . 24) (7 . 25) (9 . 27)) 3.521 {0/2:6} B:0 2.75016 [ 2.25030] ((2 . 17) (6 . 20) (11 . 24) (13 . 27)) 5.458 {0/3:6} B:0 2.75041 [ 2.25075] ((5 . 19) (6 . 20) (11 . 24) (13 . 27)) 6.870 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.7267 [and 1/min{score2}: 0.8874] [2595, 1987]: Comparing 1isp_A and 1gwc_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 15 (11 H + 4 S) secondary structure elements in 1gwc_A, of which 8 satisfy the size requirements. NO SIMILARITY! [2595, 1992]: Comparing 1isp_A and 1gx1_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 14 (7 H + 7 S) secondary structure elements in 1gx1_A, of which 10 satisfy the size requirements. 2.75020 [ 2.50027] ((2 . 5) (5 . 8) (6 . 9) (11 . 12)) 5.781 {0/4:6} B:0 2.75025 [ 2.50034] ((1 . 1) (5 . 5) (9 . 9) (11 . 12)) 6.096 {0/4:6} B:0 2.75032 [ 2.50042] ((2 . 5) (5 . 8) (6 . 9) (9 . 12)) 6.456 {0/4:6} B:0 2.75073 [ 2.50097] ((2 . 8) (4 . 9) (5 . 10) (6 . 12)) 7.941 {0/3:6} B:0 2.75081 [ 2.50107] ((1 . 1) (5 . 5) (7 . 8) (9 . 9)) 8.142 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.5449 [and 1/min{score2}: 0.5991] [2595, 1995]: Comparing 1isp_A and 1gxc_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 13 (2 H + 11 S) secondary structure elements in 1gxc_A, of which 10 satisfy the size requirements. 2.75036 [ 2.50047] ((1 . 1) (4 . 3) (6 . 8) (9 . 12)) 6.641 {0/2:6} B:0 2.75044 [ 2.50059] ((4 . 2) (6 . 7) (9 . 9) (11 . 13)) 7.002 {0/2:6} B:0 2.75056 [ 2.50075] ((6 . 1) (9 . 2) (11 . 7) (13 . 8)) 7.439 {0/1:6} B:0 2.75112 [ 2.50149] ((6 . 1) (9 . 3) (11 . 7) (13 . 8)) 8.840 {0/1:6} B:0 2.20242 [ 2.00322] ((1 . 3) (6 . 1) (9 . 7) (11 . 13) (13 . 8)) 9.073 {0/1:10} B:2 SIMILARITY (1/min{score1}): 0.4540 [and 1/min{score2}: 0.4992] [2595, 2003]: Comparing 1isp_A and 1gy7_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 12 (3 H + 9 S) secondary structure elements in 1gy7_A, of which 11 satisfy the size requirements. 2.75067 [ 2.75067] ((1 . 4) (2 . 6) (6 . 9) (9 . 12)) 7.777 {0/0:6} B:0 2.75141 [ 2.75141] ((7 . 1) (9 . 4) (11 . 7) (13 . 9)) 9.362 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.3635 [and 1/min{score2}: 0.3635] [2595, 2006]: Comparing 1isp_A and 1gyh_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 28 (5 H + 23 S) secondary structure elements in 1gyh_A, of which 22 satisfy the size requirements. 2.75009 [ 5.50001] ((1 . 11) (4 . 13) (6 . 15) (9 . 18)) 4.768 {0/2:6} B:0 2.75012 [ 5.50001] ((4 . 12) (6 . 14) (9 . 16) (13 . 20)) 5.053 {0/3:6} B:0 2.75019 [ 5.50002] ((1 . 1) (4 . 4) (6 . 7) (9 . 9)) 5.690 {0/2:6} B:0 2.75019 [ 5.50002] ((1 . 12) (4 . 14) (6 . 16) (13 . 22)) 5.702 {0/2:6} B:0 2.75021 [ 5.50003] ((1 . 15) (4 . 18) (6 . 21) (9 . 24)) 5.806 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.4784 [and 1/min{score2}: 0.2699] [2595, 2045]: Comparing 1isp_A and 1h2b_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 31 (14 H + 17 S) secondary structure elements in 1h2b_A, of which 13 satisfy the size requirements. 2.75226 [ 3.25137] ((4 . 2) (5 . 4) (7 . 5) (13 . 13)) 10.543 {0/3:6} B:0 3.66697 [ 3.91610] ((11 . 2) (13 . 3) (14 . 4) (15 . 5)) 10.204 {1/3:6} B:0 6.71445 [ 6.75892] ((9 . 1) (13 . 3) (14 . 30) (15 . 5)) 7.857 {2/3:6} B:1 SIMILARITY (1/min{score1}): 0.3633 [and 1/min{score2}: 0.3076] [2595, 2048]: Comparing 1isp_A and 1h2e_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 17 (11 H + 6 S) secondary structure elements in 1h2e_A, of which 14 satisfy the size requirements. 1.83374 [ 2.33353] ((4 . 1) (5 . 3) (6 . 4) (7 . 5) (9 . 6) (15 . 12)) 5.067 {0/8:15} B:0 2.20007 [ 2.80004] ((1 . 4) (2 . 5) (4 . 6) (9 . 13) (13 . 17)) 3.787 {0/5:10} B:0 2.75007 [ 3.50003] ((6 . 1) (9 . 4) (11 . 6) (15 . 12)) 4.376 {0/0:6} B:0 2.75015 [ 3.50007] ((4 . 1) (9 . 4) (11 . 6) (15 . 12)) 5.318 {0/3:6} B:0 2.75020 [ 3.50010] ((7 . 3) (9 . 4) (11 . 6) (15 . 12)) 5.769 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.6125 [and 1/min{score2}: 0.5034] [2595, 2054]: Comparing 1isp_A and 1h32_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 25 (14 H + 11 S) secondary structure elements in 1h32_A, of which 12 satisfy the size requirements. NO SIMILARITY! [2595, 2063]: Comparing 1isp_A and 1h3g_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 50 (24 H + 26 S) secondary structure elements in 1h3g_A, of which 9 satisfy the size requirements. 2.75025 [ 2.25045] ((4 . 42) (6 . 44) (7 . 46) (9 . 47)) 6.051 {0/2:6} B:0 2.75075 [ 2.25137] ((1 . 42) (4 . 44) (5 . 46) (6 . 49)) 8.004 {0/2:6} B:0 10.01429 [10.00642] ((1 . 42) (4 . 44) (5 . 46) (6 . 48)) 8.698 {2/2:6} B:0 4.32133 [ 4.30189] ((1 . 43) (4 . 44) (5 . 46) (6 . 50) (9 . 47) (11 . 49)) 7.872 {3/7:15} B:1 5.04631 [ 5.02097] ((1 . 44) (4 . 43) (5 . 46) (6 . 49) (9 . 50)) 7.618 {2/4:10} B:1 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.4444] [2595, 2065]: Comparing 1isp_A and 1h3i_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 28 (4 H + 24 S) secondary structure elements in 1h3i_A, of which 12 satisfy the size requirements. 3.13373 [ 3.31145] ((2 . 15) (5 . 20) (11 . 26) (13 . 28)) 10.479 {1/4:6} B:0 3.66730 [ 3.78244] ((2 . 15) (4 . 17) (11 . 27) (13 . 28)) 11.070 {1/3:6} B:0 6.71449 [ 6.73407] ((4 . 16) (6 . 18) (7 . 20) (9 . 22)) 9.057 {2/3:6} B:0 2.75186 [ 3.00143] ((6 . 18) (9 . 27) (11 . 25) (13 . 26)) 10.035 {0/1:6} B:1 4.35847 [ 4.38763] ((1 . 23) (2 . 15) (5 . 20) (6 . 22) (11 . 28)) 8.356 {3/7:10} B:1 SIMILARITY (1/min{score1}): 0.3634 [and 1/min{score2}: 0.3332] [2595, 2067]: Comparing 1isp_A and 1h3n_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 71 (37 H + 34 S) secondary structure elements in 1h3n_A, of which 34 satisfy the size requirements. 2.75151 [ 8.50005] ((6 . 2) (7 . 3) (9 . 4) (15 . 8)) 9.522 {0/0:6} B:0 2.75778 [ 8.50026] ((1 . 50) (6 . 54) (7 . 56) (13 . 63)) 14.368 {0/2:6} B:0 2.75796 [ 8.50027] ((1 . 50) (2 . 52) (5 . 56) (13 . 63)) 14.448 {0/4:6} B:0 2.76058 [ 8.50036] ((1 . 50) (5 . 56) (9 . 59) (13 . 63)) 15.519 {0/4:6} B:0 2.76101 [ 8.50038] ((2 . 52) (4 . 54) (5 . 56) (11 . 63)) 15.677 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.6235 [and 1/min{score2}: 0.2058] [2595, 2072]: Comparing 1isp_A and 1h3q_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 9 (3 H + 6 S) secondary structure elements in 1h3q_A, of which 9 satisfy the size requirements. 2.75108 [ 2.25198] ((6 . 1) (9 . 2) (13 . 7) (15 . 8)) 8.767 {0/0:6} B:0 2.92507 [ 2.54030] ((1 . 2) (2 . 3) (6 . 7) (7 . 8)) 5.521 {1/5:6} B:0 3.13273 [ 2.83670] ((4 . 1) (6 . 4) (9 . 6) (14 . 9)) 7.947 {1/4:6} B:0 3.66647 [ 3.49467] ((4 . 1) (5 . 3) (9 . 6) (14 . 9)) 8.093 {1/3:6} B:0 10.01430 [10.00643] ((1 . 4) (4 . 7) (5 . 8) (7 . 9)) 9.386 {2/2:6} B:0 SIMILARITY (1/min{score1}): 0.3635 [and 1/min{score2}: 0.4441] [2595, 2081]: Comparing 1isp_A and 1h4v_B, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 33 (17 H + 16 S) secondary structure elements in 1h4v_B, of which 20 satisfy the size requirements. 2.75041 [ 5.00007] ((1 . 12) (2 . 13) (7 . 18) (9 . 19)) 6.880 {0/4:6} B:0 2.75051 [ 5.00009] ((4 . 10) (5 . 11) (6 . 12) (13 . 19)) 7.268 {0/4:6} B:0 2.75066 [ 5.00011] ((2 . 18) (4 . 19) (6 . 21) (7 . 24)) 7.753 {0/5:6} B:0 2.75110 [ 5.00018] ((1 . 9) (4 . 10) (5 . 11) (6 . 12)) 8.810 {0/1:6} B:0 2.75114 [ 5.00019] ((1 . 10) (2 . 11) (4 . 12) (15 . 24)) 8.881 {0/4:6} B:0 SIMILARITY (1/min{score1}): 0.4091 [and 1/min{score2}: 0.2868] [2595, 2083]: Comparing 1isp_A and 1h4x_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 11 (5 H + 6 S) secondary structure elements in 1h4x_A, of which 9 satisfy the size requirements. 2.20016 [ 1.80029] ((6 . 2) (7 . 3) (9 . 4) (11 . 7) (15 . 11)) 4.570 {0/0:10} B:0 2.20033 [ 1.80060] ((4 . 2) (5 . 3) (6 . 4) (7 . 6) (9 . 7)) 5.493 {0/2:10} B:0 2.75010 [ 2.25018] ((6 . 2) (9 . 4) (13 . 7) (15 . 11)) 4.843 {0/1:6} B:0 2.75019 [ 2.25034] ((5 . 3) (6 . 4) (7 . 6) (11 . 7)) 5.646 {0/1:6} B:0 2.75409 [ 2.25745] ((9 . 2) (11 . 4) (14 . 6) (15 . 8)) 12.228 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.4545 [and 1/min{score2}: 0.5555] [2595, 2094]: Comparing 1isp_A and 1h67_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 7 (7 H + 0 S) secondary structure elements in 1h67_A, of which 6 satisfy the size requirements. NO SIMILARITY! [2595, 2097]: Comparing 1isp_A and 1h6f_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 20 (6 H + 14 S) secondary structure elements in 1h6f_A, of which 14 satisfy the size requirements. NO SIMILARITY! [2595, 2114]: Comparing 1isp_A and 1h6v_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 40 (18 H + 22 S) secondary structure elements in 1h6v_A, of which 11 satisfy the size requirements. 2.75019 [ 2.75019] ((6 . 28) (9 . 29) (13 . 36) (15 . 37)) 5.672 {0/0:6} B:0 2.75046 [ 2.75046] ((9 . 29) (11 . 32) (13 . 36) (15 . 37)) 7.066 {0/0:6} B:0 2.75054 [ 2.75054] ((4 . 28) (5 . 30) (6 . 32) (9 . 36)) 7.366 {0/1:6} B:0 2.75080 [ 2.75080] ((6 . 28) (9 . 29) (11 . 34) (13 . 36)) 8.115 {0/0:6} B:0 2.75180 [ 2.75180] ((6 . 29) (7 . 30) (11 . 36) (14 . 39)) 9.951 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.5453 [and 1/min{score2}: 0.5453] [2595, 2116]: Comparing 1isp_A and 1h6y_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 12 (0 H + 12 S) secondary structure elements in 1h6y_A, of which 12 satisfy the size requirements. 2.75031 [ 3.00024] ((1 . 5) (4 . 7) (6 . 10) (9 . 12)) 6.424 {0/2:6} B:0 2.75091 [ 3.00070] ((1 . 3) (4 . 5) (9 . 10) (11 . 12)) 8.394 {0/3:6} B:0 2.75108 [ 3.00083] ((1 . 4) (4 . 6) (6 . 9) (9 . 11)) 8.760 {0/2:6} B:0 2.75137 [ 3.00106] ((1 . 1) (4 . 4) (6 . 6) (11 . 11)) 9.302 {0/3:6} B:0 2.75159 [ 3.00122] ((4 . 3) (9 . 7) (11 . 10) (13 . 12)) 9.645 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.3333] [2595, 2117]: Comparing 1isp_A and 1h70_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 27 (12 H + 15 S) secondary structure elements in 1h70_A, of which 22 satisfy the size requirements. 1.57367 [ 3.14314] ((1 . 1) (4 . 4) (6 . 5) (7 . 8) (9 . 9) (11 . 11) (13 . 12)) 6.915 {0/4:21} B:0 1.83516 [ 3.66690] ((1 . 6) (2 . 8) (4 . 9) (9 . 14) (11 . 16) (13 . 22)) 7.374 {0/3:15} B:0 2.20046 [ 4.40006] ((1 . 6) (2 . 8) (4 . 9) (5 . 13) (6 . 14)) 5.976 {0/1:10} B:0 2.20131 [ 4.40016] ((4 . 1) (9 . 6) (11 . 9) (13 . 12) (15 . 13)) 7.775 {0/1:10} B:0 2.50623 [ 4.44630] ((6 . 12) (11 . 17) (13 . 20) (14 . 21) (15 . 24)) 6.533 {1/5:10} B:0 SIMILARITY (1/min{score1}): 0.7247 [and 1/min{score2}: 0.3636] [2595, 2118]: Comparing 1isp_A and 1h72_C, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 23 (11 H + 12 S) secondary structure elements in 1h72_C, of which 12 satisfy the size requirements. 2.75058 [ 3.00045] ((1 . 1) (6 . 5) (7 . 6) (9 . 7)) 7.500 {0/2:6} B:0 2.75058 [ 3.00045] ((4 . 1) (6 . 5) (7 . 6) (9 . 7)) 7.500 {0/3:6} B:0 2.75099 [ 3.00076] ((6 . 1) (11 . 5) (13 . 7) (15 . 8)) 8.565 {0/1:6} B:0 2.75157 [ 3.00121] ((6 . 1) (7 . 2) (13 . 7) (15 . 8)) 9.615 {0/2:6} B:0 2.75208 [ 3.00160] ((1 . 1) (5 . 6) (7 . 8) (13 . 11)) 10.320 {0/4:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.3333] [2595, 2122]: Comparing 1isp_A and 1h7e_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 23 (11 H + 12 S) secondary structure elements in 1h7e_A, of which 21 satisfy the size requirements. 1.83371 [ 3.50005] ((1 . 1) (2 . 5) (4 . 6) (7 . 9) (9 . 10) (11 . 12)) 4.953 {0/9:15} B:0 2.20004 [ 4.20001] ((4 . 1) (5 . 5) (6 . 6) (7 . 7) (9 . 8)) 3.170 {0/4:10} B:0 2.25585 [ 4.20831] ((2 . 5) (4 . 6) (5 . 9) (6 . 10) (7 . 11)) 6.624 {1/8:10} B:0 2.75024 [ 5.25003] ((4 . 1) (5 . 2) (6 . 6) (9 . 8)) 6.010 {0/2:6} B:0 2.75030 [ 5.25004] ((2 . 5) (5 . 9) (6 . 10) (11 . 15)) 6.368 {0/4:6} B:0 SIMILARITY (1/min{score1}): 0.7450 [and 1/min{score2}: 0.4641] [2595, 2166]: Comparing 1isp_A and 1hc7_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 37 (14 H + 23 S) secondary structure elements in 1hc7_A, of which 20 satisfy the size requirements. 2.75024 [ 5.00004] ((5 . 10) (6 . 12) (9 . 13) (13 . 16)) 6.006 {0/2:6} B:0 2.75052 [ 5.00009] ((4 . 13) (5 . 14) (6 . 15) (9 . 17)) 7.291 {0/2:6} B:0 2.75064 [ 5.00011] ((1 . 13) (2 . 14) (4 . 15) (6 . 17)) 7.675 {0/2:6} B:0 2.75141 [ 5.00023] ((4 . 13) (5 . 14) (9 . 17) (11 . 21)) 9.363 {0/1:6} B:0 2.75225 [ 5.00037] ((5 . 10) (6 . 12) (13 . 16) (15 . 18)) 10.523 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.2693] [2595, 2179]: Comparing 1isp_A and 1hd7_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 23 (11 H + 12 S) secondary structure elements in 1hd7_A, of which 19 satisfy the size requirements. 1.83609 [ 3.16720] ((1 . 1) (6 . 4) (9 . 6) (11 . 9) (13 . 10) (15 . 12)) 8.175 {0/0:15} B:0 2.20023 [ 3.80004] ((2 . 2) (6 . 5) (9 . 7) (11 . 10) (13 . 13)) 5.017 {0/5:10} B:0 2.20097 [ 3.80019] ((5 . 2) (6 . 4) (9 . 5) (11 . 7) (13 . 10)) 7.223 {0/4:10} B:0 2.20222 [ 3.80043] ((1 . 10) (2 . 12) (4 . 13) (7 . 18) (11 . 22)) 8.880 {0/3:10} B:0 2.20232 [ 3.80045] ((1 . 10) (2 . 12) (4 . 13) (5 . 16) (7 . 18)) 8.978 {0/4:10} B:0 SIMILARITY (1/min{score1}): 0.6359 [and 1/min{score2}: 0.3684] [2595, 2196]: Comparing 1isp_A and 1hf2_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 20 (4 H + 16 S) secondary structure elements in 1hf2_A, of which 10 satisfy the size requirements. 2.20010 [ 2.00013] ((1 . 10) (6 . 12) (9 . 14) (11 . 16) (13 . 18)) 4.077 {0/2:10} B:0 2.75005 [ 2.50007] ((6 . 10) (9 . 12) (11 . 14) (13 . 18)) 4.148 {0/1:6} B:0 2.75006 [ 2.50008] ((4 . 11) (6 . 15) (9 . 18) (11 . 19)) 4.233 {0/1:6} B:0 2.75018 [ 2.50024] ((6 . 10) (9 . 12) (11 . 15) (13 . 18)) 5.602 {0/1:6} B:0 2.75025 [ 2.50033] ((6 . 10) (9 . 13) (11 . 16) (13 . 18)) 6.085 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.5452 [and 1/min{score2}: 0.5997] [2595, 2203]: Comparing 1isp_A and 1hfo_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 13 (6 H + 7 S) secondary structure elements in 1hfo_A, of which 8 satisfy the size requirements. 2.75040 [ 2.00103] ((1 . 5) (4 . 7) (5 . 8) (6 . 10)) 6.824 {0/1:6} B:0 3.66661 [ 3.43702] ((6 . 1) (9 . 5) (11 . 7) (14 . 8)) 8.834 {1/3:6} B:0 5.11075 [ 5.03180] ((4 . 1) (5 . 3) (6 . 5) (9 . 7)) 7.593 {1/2:6} B:0 6.71442 [ 6.68014] ((1 . 1) (2 . 3) (4 . 5) (9 . 10)) 5.502 {2/3:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.4997] [2595, 2205]: Comparing 1isp_A and 1hfu_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 45 (13 H + 32 S) secondary structure elements in 1hfu_A, of which 14 satisfy the size requirements. 2.75091 [ 3.50044] ((1 . 13) (6 . 18) (9 . 21) (11 . 23)) 8.383 {0/2:6} B:0 2.75156 [ 3.50076] ((2 . 12) (4 . 13) (6 . 17) (9 . 19)) 9.605 {0/2:6} B:0 2.75314 [ 3.50153] ((2 . 12) (9 . 17) (13 . 23) (15 . 25)) 11.448 {0/3:6} B:0 3.13535 [ 3.71028] ((2 . 12) (4 . 13) (14 . 24) (15 . 25)) 12.587 {1/4:6} B:0 5.11074 [ 5.27644] ((4 . 15) (6 . 18) (11 . 23) (13 . 26)) 7.453 {1/2:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.3192] [2595, 2209]: Comparing 1isp_A and 1hgx_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 12 (3 H + 9 S) secondary structure elements in 1hgx_A, of which 11 satisfy the size requirements. 1.61403 [ 1.61403] ((1 . 3) (2 . 4) (4 . 5) (6 . 7) (7 . 8) (9 . 9) (11 . 10)) 4.383 {1/11:21} B:0 2.75005 [ 2.75005] ((2 . 4) (5 . 8) (6 . 9) (9 . 10)) 4.048 {0/3:6} B:0 2.75029 [ 2.75029] ((7 . 2) (9 . 3) (11 . 5) (15 . 8)) 6.320 {0/0:6} B:0 2.75030 [ 2.75030] ((5 . 2) (6 . 3) (7 . 4) (11 . 7)) 6.341 {0/3:6} B:0 2.75056 [ 2.75056] ((2 . 2) (5 . 4) (9 . 7) (11 . 10)) 7.426 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.7143 [and 1/min{score2}: 0.7143] [2595, 2220]: Comparing 1isp_A and 1hk9_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 7 (2 H + 5 S) secondary structure elements in 1hk9_A, of which 6 satisfy the size requirements. NO SIMILARITY! [2595, 2233]: Comparing 1isp_A and 1hlb, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 9 (9 H + 0 S) secondary structure elements in 1hlb, of which 7 satisfy the size requirements. NO SIMILARITY! [2595, 2243]: Comparing 1isp_A and 1hn0_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 80 (28 H + 52 S) secondary structure elements in 1hn0_A, of which 24 satisfy the size requirements. 2.66570 [ 4.14503] ((1 . 45) (4 . 51) (6 . 53) (9 . 55) (11 . 65) (13 . 67)) 9.696 {1/4:15} B:0 2.75048 [ 6.00005] ((1 . 47) (2 . 48) (11 . 58) (13 . 60)) 7.152 {0/5:6} B:0 2.75101 [ 6.00010] ((4 . 52) (6 . 54) (9 . 57) (11 . 61)) 8.610 {0/2:6} B:0 2.75104 [ 6.00010] ((4 . 51) (6 . 53) (9 . 56) (13 . 62)) 8.670 {0/3:6} B:0 2.75114 [ 6.00011] ((6 . 56) (9 . 59) (11 . 62) (13 . 65)) 8.882 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.3751 [and 1/min{score2}: 0.2413] [2595, 2244]: Comparing 1isp_A and 1hn0_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 80 (28 H + 52 S) secondary structure elements in 1hn0_A, of which 11 satisfy the size requirements. 2.75005 [ 2.75005] ((6 . 69) (9 . 70) (11 . 71) (13 . 75)) 3.970 {0/1:6} B:0 2.75016 [ 2.75016] ((4 . 69) (6 . 71) (9 . 75) (13 . 79)) 5.471 {0/3:6} B:0 2.75024 [ 2.75024] ((4 . 70) (6 . 74) (9 . 76) (13 . 80)) 6.003 {0/3:6} B:0 2.75036 [ 2.75036] ((1 . 69) (4 . 71) (6 . 75) (11 . 79)) 6.655 {0/2:6} B:0 2.75041 [ 2.75041] ((6 . 69) (9 . 70) (11 . 74) (13 . 75)) 6.856 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.3636] [2595, 2248]: Comparing 1isp_A and 1hnj_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 28 (15 H + 13 S) secondary structure elements in 1hnj_A, of which 8 satisfy the size requirements. 2.75010 [ 2.00026] ((2 . 20) (4 . 22) (5 . 26) (6 . 27)) 4.829 {0/2:6} B:0 2.75026 [ 2.00068] ((2 . 20) (5 . 23) (7 . 26) (9 . 27)) 6.155 {0/5:6} B:0 2.75065 [ 2.00169] ((2 . 20) (4 . 22) (5 . 23) (7 . 26)) 7.724 {0/4:6} B:0 2.75078 [ 2.00203] ((1 . 16) (5 . 20) (6 . 22) (11 . 27)) 8.080 {0/2:6} B:0 2.75141 [ 2.00365] ((1 . 16) (5 . 20) (9 . 22) (13 . 27)) 9.358 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.4786 [and 1/min{score2}: 0.6246] [2595, 2249]: Comparing 1isp_A and 1hnn_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 23 (12 H + 11 S) secondary structure elements in 1hnn_A, of which 18 satisfy the size requirements. 2.20017 [ 3.60004] ((1 . 7) (2 . 8) (6 . 11) (9 . 12) (11 . 16)) 4.646 {0/5:10} B:0 2.20031 [ 3.60007] ((2 . 9) (4 . 11) (6 . 12) (9 . 16) (13 . 21)) 5.437 {0/6:10} B:0 2.75004 [ 4.50001] ((4 . 12) (5 . 14) (6 . 16) (11 . 21)) 3.756 {0/1:6} B:0 2.75006 [ 4.50001] ((4 . 12) (5 . 14) (6 . 16) (9 . 20)) 4.188 {0/2:6} B:0 2.75007 [ 4.50002] ((5 . 3) (6 . 4) (9 . 7) (13 . 11)) 4.351 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.8175 [and 1/min{score2}: 0.4999] [2595, 2269]: Comparing 1isp_A and 1hrd_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 32 (20 H + 12 S) secondary structure elements in 1hrd_A, of which 13 satisfy the size requirements. 1.89260 [ 2.20341] ((1 . 8) (2 . 9) (4 . 10) (5 . 11) (6 . 12) (7 . 13)) 4.947 {1/9:15} B:0 2.75023 [ 3.25014] ((4 . 8) (5 . 9) (6 . 10) (9 . 12)) 5.970 {0/3:6} B:0 2.75274 [ 3.25166] ((9 . 6) (13 . 8) (14 . 9) (15 . 11)) 11.055 {0/3:6} B:0 2.75367 [ 3.25223] ((1 . 6) (5 . 9) (7 . 11) (11 . 12)) 11.899 {0/4:6} B:0 2.75393 [ 3.25238] ((2 . 2) (4 . 6) (13 . 12) (15 . 13)) 12.106 {0/4:6} B:0 SIMILARITY (1/min{score1}): 0.5284 [and 1/min{score2}: 0.4563] [2595, 2279]: Comparing 1isp_A and 1hsk_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 31 (12 H + 19 S) secondary structure elements in 1hsk_A, of which 16 satisfy the size requirements. 2.75010 [ 4.00003] ((4 . 5) (6 . 9) (13 . 20) (15 . 21)) 4.829 {0/4:6} B:0 2.75030 [ 4.00010] ((5 . 12) (7 . 15) (9 . 19) (11 . 22)) 6.338 {0/2:6} B:0 2.75178 [ 4.00058] ((1 . 10) (5 . 15) (6 . 20) (9 . 22)) 9.928 {0/2:6} B:0 3.13340 [ 4.14507] ((2 . 1) (6 . 7) (9 . 9) (14 . 15)) 9.850 {1/4:6} B:0 3.13387 [ 4.14526] ((4 . 9) (5 . 12) (7 . 15) (9 . 19)) 10.706 {1/4:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.3078] [2595, 2295]: Comparing 1isp_A and 1huw, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 7 (7 H + 0 S) secondary structure elements in 1huw, of which 7 satisfy the size requirements. NO SIMILARITY! [2595, 2298]: Comparing 1isp_A and 1hv8_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 29 (16 H + 13 S) secondary structure elements in 1hv8_A, of which 16 satisfy the size requirements. 1.57157 [ 2.28576] ((1 . 6) (2 . 7) (4 . 8) (6 . 10) (9 . 12) (11 . 15) (13 . 17)) 3.474 {0/10:21} B:0 1.83337 [ 2.66668] ((1 . 6) (2 . 7) (4 . 10) (6 . 12) (9 . 15) (11 . 17)) 2.826 {0/7:15} B:0 1.83341 [ 2.66669] ((1 . 6) (2 . 7) (4 . 8) (6 . 12) (9 . 15) (11 . 17)) 3.282 {0/8:15} B:0 1.87284 [ 2.67983] ((2 . 7) (5 . 9) (6 . 10) (9 . 12) (11 . 15) (13 . 17)) 4.404 {1/10:15} B:0 2.20025 [ 3.20008] ((6 . 8) (7 . 9) (9 . 10) (11 . 12) (13 . 15)) 5.155 {0/1:10} B:0 SIMILARITY (1/min{score1}): 0.9782 [and 1/min{score2}: 0.6840] [2595, 2308]: Comparing 1isp_A and 1hwx_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 34 (23 H + 11 S) secondary structure elements in 1hwx_A, of which 12 satisfy the size requirements. 1.89250 [ 2.04621] ((1 . 6) (2 . 7) (4 . 8) (5 . 10) (6 . 11) (7 . 12)) 4.534 {1/9:15} B:0 2.21040 [ 2.40803] ((4 . 4) (9 . 6) (11 . 8) (14 . 10) (15 . 12)) 13.075 {0/5:10} B:0 2.75080 [ 3.00062] ((1 . 4) (4 . 6) (5 . 7) (6 . 8)) 8.139 {0/1:6} B:0 2.75111 [ 3.00086] ((1 . 8) (2 . 10) (4 . 11) (5 . 12)) 8.826 {0/2:6} B:0 2.75280 [ 3.00216] ((9 . 4) (13 . 6) (14 . 7) (15 . 10)) 11.123 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.6178 [and 1/min{score2}: 0.5711] [2595, 2314]: Comparing 1isp_A and 1hx6_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 28 (6 H + 22 S) secondary structure elements in 1hx6_A, of which 13 satisfy the size requirements. 2.75224 [ 3.25136] ((1 . 5) (6 . 11) (11 . 17) (13 . 18)) 10.519 {0/1:6} B:0 3.66670 [ 3.91588] ((6 . 2) (9 . 4) (13 . 8) (14 . 9)) 9.231 {1/3:6} B:0 5.11111 [ 5.21002] ((5 . 1) (6 . 2) (13 . 8) (15 . 9)) 11.252 {2/4:6} B:0 5.11126 [ 5.21015] ((5 . 1) (6 . 2) (13 . 8) (14 . 9)) 12.063 {2/4:6} B:0 5.11159 [ 5.21046] ((2 . 1) (4 . 2) (6 . 4) (11 . 8)) 13.436 {2/4:6} B:0 SIMILARITY (1/min{score1}): 0.3633 [and 1/min{score2}: 0.3076] [2595, 2340]: Comparing 1isp_A and 1hyu_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 42 (16 H + 26 S) secondary structure elements in 1hyu_A, of which 8 satisfy the size requirements. 2.75038 [ 2.00099] ((5 . 8) (7 . 10) (9 . 11) (11 . 14)) 6.754 {0/2:6} B:0 2.75053 [ 2.00139] ((7 . 8) (11 . 11) (13 . 14) (14 . 15)) 7.345 {0/2:6} B:0 2.75063 [ 2.00164] ((9 . 9) (11 . 11) (13 . 14) (14 . 15)) 7.663 {0/2:6} B:0 2.75094 [ 2.00244] ((2 . 8) (4 . 9) (5 . 10) (9 . 14)) 8.464 {0/3:6} B:0 2.75104 [ 2.00270] ((1 . 9) (2 . 10) (4 . 11) (5 . 15)) 8.681 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.5043 [and 1/min{score2}: 0.6078] [2595, 2342]: Comparing 1isp_A and 1hz4_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 19 (19 H + 0 S) secondary structure elements in 1hz4_A, of which 18 satisfy the size requirements. NO SIMILARITY! [2595, 2344]: Comparing 1isp_A and 1hzd_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 24 (14 H + 10 S) secondary structure elements in 1hzd_A, of which 24 satisfy the size requirements. 2.20013 [ 4.80001] ((6 . 10) (7 . 12) (9 . 13) (13 . 20) (15 . 21)) 4.405 {0/2:10} B:0 2.20077 [ 4.80007] ((2 . 5) (6 . 10) (7 . 12) (9 . 13) (15 . 21)) 6.799 {0/3:10} B:0 2.20086 [ 4.80008] ((2 . 5) (4 . 6) (6 . 10) (9 . 13) (15 . 21)) 6.995 {0/3:10} B:0 2.20181 [ 4.80017] ((2 . 5) (4 . 6) (6 . 10) (7 . 12) (15 . 21)) 8.437 {0/2:10} B:0 2.75001 [ 6.00000] ((4 . 3) (5 . 5) (9 . 10) (11 . 13)) 3.007 {0/4:6} B:0 SIMILARITY (1/min{score1}): 0.6354 [and 1/min{score2}: 0.3301] [2595, 2364]: Comparing 1isp_A and 1i1n_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 21 (11 H + 10 S) secondary structure elements in 1i1n_A, of which 16 satisfy the size requirements. 1.83341 [ 2.66669] ((1 . 7) (2 . 8) (4 . 9) (6 . 15) (9 . 18) (11 . 20)) 3.323 {0/4:15} B:0 1.83471 [ 2.66711] ((1 . 7) (2 . 8) (4 . 9) (5 . 10) (9 . 15) (13 . 20)) 6.866 {0/7:15} B:0 2.20010 [ 3.20003] ((1 . 7) (6 . 15) (7 . 16) (9 . 18) (11 . 20)) 4.050 {0/1:10} B:0 2.20024 [ 3.20008] ((5 . 6) (6 . 7) (9 . 9) (11 . 12) (15 . 16)) 5.081 {0/4:10} B:0 2.20026 [ 3.20009] ((5 . 6) (6 . 7) (7 . 8) (9 . 9) (15 . 16)) 5.213 {0/4:10} B:0 SIMILARITY (1/min{score1}): 0.8879 [and 1/min{score2}: 0.6216] [2595, 2381]: Comparing 1isp_A and 1i3z_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 9 (2 H + 7 S) secondary structure elements in 1i3z_A, of which 6 satisfy the size requirements. 5.11071 [ 5.01015] ((7 . 2) (9 . 3) (11 . 5) (14 . 8)) 6.524 {1/2:6} B:0 6.68636 [ 6.66844] ((6 . 3) (9 . 4) (11 . 5) (13 . 6) (14 . 8)) 6.287 {2/3:10} B:0 2.75024 [ 1.50148] ((1 . 3) (2 . 2) (4 . 4) (7 . 8)) 6.022 {0/1:6} B:1 2.20072 [ 1.20441] ((1 . 5) (2 . 2) (4 . 4) (6 . 3) (7 . 8)) 6.693 {0/3:10} B:2 SIMILARITY (1/min{score1}): 0.4544 [and 1/min{score2}: 0.8303] [2595, 2389]: Comparing 1isp_A and 1i4u_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 15 (4 H + 11 S) secondary structure elements in 1i4u_A, of which 14 satisfy the size requirements. 2.20206 [ 2.80100] ((1 . 4) (6 . 9) (9 . 10) (11 . 11) (13 . 14)) 8.706 {0/2:10} B:0 2.75012 [ 3.50006] ((4 . 9) (6 . 11) (7 . 12) (9 . 14)) 5.066 {0/3:6} B:0 2.75062 [ 3.50030] ((1 . 9) (4 . 11) (5 . 12) (6 . 14)) 7.621 {0/1:6} B:0 2.75082 [ 3.50040] ((1 . 5) (4 . 7) (9 . 11) (11 . 14)) 8.186 {0/4:6} B:0 2.75091 [ 3.50044] ((1 . 4) (6 . 10) (9 . 11) (11 . 14)) 8.385 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.4542 [and 1/min{score2}: 0.3570] [2595, 2393]: Comparing 1isp_A and 1i50_C, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 19 (8 H + 11 S) secondary structure elements in 1i50_C, of which 6 satisfy the size requirements. NO SIMILARITY! [2595, 2408]: Comparing 1isp_A and 1i5p_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 47 (16 H + 31 S) secondary structure elements in 1i5p_A, of which 12 satisfy the size requirements. 2.75030 [ 3.00023] ((1 . 39) (4 . 41) (6 . 45) (9 . 47)) 6.345 {0/1:6} B:0 2.75075 [ 3.00057] ((6 . 37) (9 . 39) (11 . 41) (13 . 45)) 7.986 {0/1:6} B:0 3.66690 [ 3.78208] ((1 . 34) (4 . 38) (6 . 41) (11 . 46)) 9.965 {1/3:6} B:0 3.66691 [ 3.78209] ((1 . 37) (4 . 40) (6 . 42) (9 . 46)) 10.019 {1/3:6} B:0 5.11105 [ 5.15506] ((1 . 33) (6 . 40) (11 . 46) (13 . 47)) 10.876 {1/2:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.3333] [2595, 2409]: Comparing 1isp_A and 1i5z_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 17 (6 H + 11 S) secondary structure elements in 1i5z_A, of which 10 satisfy the size requirements. 3.13365 [ 2.97467] ((4 . 2) (6 . 5) (9 . 8) (14 . 11)) 10.334 {1/4:6} B:0 3.13423 [ 2.97535] ((4 . 2) (6 . 4) (9 . 6) (14 . 11)) 11.262 {1/4:6} B:0 5.11091 [ 5.07662] ((2 . 1) (4 . 2) (9 . 8) (14 . 11)) 9.736 {2/4:6} B:0 6.71446 [ 6.69944] ((4 . 3) (6 . 5) (9 . 6) (15 . 11)) 8.073 {2/3:6} B:0 2.75033 [ 2.50044] ((6 . 8) (9 . 5) (11 . 6) (15 . 11)) 6.519 {0/0:6} B:1 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.3999] [2595, 2410]: Comparing 1isp_A and 1i5z_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 17 (6 H + 11 S) secondary structure elements in 1i5z_A, of which 6 satisfy the size requirements. 2.75011 [ 1.50067] ((5 . 12) (6 . 13) (7 . 15) (9 . 16)) 4.934 {0/3:6} B:0 2.75174 [ 1.51059] ((2 . 12) (4 . 13) (6 . 16) (7 . 15)) 9.865 {0/4:6} B:1 5.11074 [ 5.01018] ((4 . 13) (5 . 14) (6 . 16) (7 . 15)) 7.348 {2/4:6} B:1 4.08855 [ 4.00810] ((1 . 13) (5 . 12) (6 . 17) (7 . 15) (9 . 16)) 4.418 {2/5:10} B:2 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.6664] [2595, 2422]: Comparing 1isp_A and 1i7n_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 27 (10 H + 17 S) secondary structure elements in 1i7n_A, of which 8 satisfy the size requirements. 2.20012 [ 1.60032] ((1 . 1) (2 . 2) (4 . 4) (6 . 9) (7 . 10)) 4.305 {0/3:10} B:0 2.75004 [ 2.00010] ((1 . 1) (2 . 2) (4 . 4) (9 . 9)) 3.767 {0/2:6} B:0 2.75010 [ 2.00027] ((6 . 1) (7 . 2) (9 . 4) (14 . 10)) 4.878 {0/0:6} B:0 2.75073 [ 2.00190] ((1 . 1) (2 . 2) (4 . 4) (6 . 8)) 7.952 {0/2:6} B:0 5.04625 [ 5.01310] ((1 . 1) (2 . 2) (4 . 4) (6 . 7) (9 . 9)) 6.114 {2/4:10} B:0 SIMILARITY (1/min{score1}): 0.5448 [and 1/min{score2}: 0.7469] [2595, 2423]: Comparing 1isp_A and 1i7n_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 27 (10 H + 17 S) secondary structure elements in 1i7n_A, of which 14 satisfy the size requirements. 2.75064 [ 3.50031] ((1 . 17) (2 . 18) (4 . 19) (9 . 25)) 7.682 {0/1:6} B:0 2.75081 [ 3.50039] ((2 . 18) (4 . 19) (7 . 23) (9 . 25)) 8.146 {0/2:6} B:0 2.75174 [ 3.50085] ((2 . 18) (4 . 19) (6 . 21) (9 . 25)) 9.877 {0/3:6} B:0 2.75651 [ 3.50317] ((5 . 18) (6 . 21) (11 . 25) (14 . 27)) 13.739 {0/3:6} B:0 3.66955 [ 4.06925] ((1 . 14) (6 . 21) (11 . 25) (14 . 27)) 14.501 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.3439] [2595, 2440]: Comparing 1isp_A and 1iae, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 19 (10 H + 9 S) secondary structure elements in 1iae, of which 11 satisfy the size requirements. 2.75002 [ 2.75002] ((9 . 4) (11 . 7) (13 . 9) (15 . 10)) 3.216 {0/0:6} B:0 2.75009 [ 2.75009] ((1 . 4) (2 . 5) (4 . 7) (6 . 9)) 4.694 {0/2:6} B:0 2.75046 [ 2.75046] ((1 . 4) (2 . 5) (4 . 6) (7 . 10)) 7.075 {0/3:6} B:0 2.75056 [ 2.75056] ((1 . 4) (2 . 5) (4 . 7) (7 . 10)) 7.442 {0/2:6} B:0 2.75226 [ 2.75226] ((4 . 9) (5 . 10) (11 . 17) (14 . 19)) 10.542 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.4540 [and 1/min{score2}: 0.4540] [2595, 2443]: Comparing 1isp_A and 1iap_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 10 (10 H + 0 S) secondary structure elements in 1iap_A, of which 10 satisfy the size requirements. NO SIMILARITY! [2595, 2447]: Comparing 1isp_A and 1iat_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 43 (30 H + 13 S) secondary structure elements in 1iat_A, of which 35 satisfy the size requirements. 1.66191 [ 5.00306] ((1 . 13) (4 . 15) (5 . 16) (6 . 18) (9 . 21) (11 . 24) (14 . 26)) 4.506 {1/9:21} B:0 1.98330 [ 5.83858] ((5 . 16) (6 . 18) (7 . 19) (11 . 21) (13 . 24) (14 . 26)) 5.103 {1/7:15} B:0 2.20016 [ 7.00001] ((1 . 30) (2 . 32) (4 . 33) (7 . 37) (11 . 40)) 4.631 {0/5:10} B:0 2.20029 [ 7.00001] ((5 . 12) (6 . 13) (7 . 14) (9 . 15) (14 . 19)) 5.323 {0/7:10} B:0 2.20035 [ 7.00001] ((1 . 30) (2 . 32) (6 . 33) (13 . 40) (15 . 41)) 5.582 {0/3:10} B:0 SIMILARITY (1/min{score1}): 0.6833 [and 1/min{score2}: 0.2797] [2595, 2462]: Comparing 1isp_A and 1id0_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 12 (5 H + 7 S) secondary structure elements in 1id0_A, of which 10 satisfy the size requirements. 2.75028 [ 2.50037] ((1 . 3) (2 . 5) (6 . 7) (11 . 12)) 6.253 {0/2:6} B:0 2.75044 [ 2.50058] ((1 . 3) (2 . 5) (4 . 6) (11 . 12)) 6.997 {0/2:6} B:0 2.75135 [ 2.50179] ((1 . 6) (5 . 10) (6 . 11) (9 . 12)) 9.257 {0/2:6} B:0 2.75150 [ 2.50199] ((2 . 2) (4 . 3) (5 . 5) (6 . 6)) 9.509 {0/2:6} B:0 2.75151 [ 2.50201] ((4 . 1) (6 . 3) (9 . 6) (14 . 10)) 9.527 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.5454 [and 1/min{score2}: 0.5999] [2595, 2465]: Comparing 1isp_A and 1idr_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 8 (8 H + 0 S) secondary structure elements in 1idr_A, of which 7 satisfy the size requirements. NO SIMILARITY! [2595, 2510]: Comparing 1isp_A and 1iir_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 30 (17 H + 13 S) secondary structure elements in 1iir_A, of which 26 satisfy the size requirements. 1.24303 [ 2.89050] ((1 . 17) (2 . 18) (4 . 19) (5 . 22) (6 . 23) (7 . 24) (9 . 25) (11 . 27) (15 . 28)) 3.834 {1/16:36} B:0 1.37591 [ 3.25007] ((1 . 1) (2 . 2) (4 . 3) (5 . 6) (6 . 7) (7 . 8) (9 . 9) (15 . 30)) 4.988 {0/13:28} B:0 1.57172 [ 3.71431] ((1 . 1) (2 . 2) (4 . 3) (5 . 6) (6 . 7) (9 . 9) (15 . 30)) 4.149 {0/10:21} B:0 1.83338 [ 4.33334] ((1 . 17) (2 . 18) (4 . 19) (6 . 23) (9 . 25) (11 . 27)) 2.882 {0/6:15} B:0 1.83350 [ 4.33335] ((1 . 17) (4 . 19) (5 . 22) (6 . 23) (9 . 25) (11 . 27)) 4.073 {0/7:15} B:0 SIMILARITY (1/min{score1}): 0.9082 [and 1/min{score2}: 0.3846] [2595, 2519]: Comparing 1isp_A and 1ijz_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 6 (4 H + 2 S) secondary structure elements in 1ijz_A, of which 6 satisfy the size requirements. NO SIMILARITY! [2595, 2525]: Comparing 1isp_A and 1ikp_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 52 (27 H + 25 S) secondary structure elements in 1ikp_A, of which 14 satisfy the size requirements. 2.75074 [ 3.50036] ((1 . 38) (2 . 39) (4 . 41) (7 . 46)) 7.983 {0/1:6} B:0 2.75107 [ 3.50052] ((9 . 45) (11 . 47) (13 . 50) (15 . 52)) 8.742 {0/0:6} B:0 3.13274 [ 3.70871] ((4 . 41) (6 . 45) (7 . 46) (9 . 47)) 7.962 {1/4:6} B:0 3.13282 [ 3.70876] ((1 . 43) (2 . 44) (6 . 48) (7 . 49)) 8.272 {1/4:6} B:0 3.13310 [ 3.70893] ((4 . 38) (9 . 43) (13 . 48) (14 . 49)) 9.141 {1/4:6} B:0 SIMILARITY (1/min{score1}): 0.3857 [and 1/min{score2}: 0.3671] [2595, 2529]: Comparing 1isp_A and 1ilo_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 7 (3 H + 4 S) secondary structure elements in 1ilo_A, of which 7 satisfy the size requirements. 1.98308 [ 1.56645] ((1 . 1) (2 . 2) (4 . 3) (6 . 5) (9 . 6) (15 . 7)) 3.863 {1/7:15} B:0 2.75042 [ 1.75164] ((9 . 1) (11 . 3) (13 . 6) (14 . 7)) 6.930 {0/3:6} B:0 2.75057 [ 1.75222] ((1 . 1) (2 . 2) (4 . 3) (7 . 7)) 7.480 {0/3:6} B:0 2.75156 [ 1.75603] ((1 . 1) (2 . 2) (4 . 3) (5 . 7)) 9.607 {0/1:6} B:0 4.08900 [ 4.01543] ((4 . 1) (5 . 2) (6 . 3) (7 . 4) (9 . 6)) 9.632 {2/5:10} B:0 SIMILARITY (1/min{score1}): 0.5043 [and 1/min{score2}: 0.7120] [2595, 2533]: Comparing 1isp_A and 1im8_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 19 (11 H + 8 S) secondary structure elements in 1im8_A, of which 16 satisfy the size requirements. 1.57614 [ 2.28725] ((2 . 3) (6 . 4) (7 . 5) (9 . 6) (11 . 9) (13 . 13) (15 . 17)) 8.331 {0/2:21} B:0 1.83471 [ 2.66711] ((1 . 4) (2 . 5) (4 . 6) (6 . 9) (9 . 13) (15 . 17)) 6.864 {0/6:15} B:0 2.20002 [ 3.20001] ((1 . 4) (2 . 5) (4 . 6) (6 . 9) (11 . 13)) 2.728 {0/3:10} B:0 2.20005 [ 3.20002] ((1 . 4) (4 . 8) (6 . 9) (9 . 13) (13 . 18)) 3.502 {0/5:10} B:0 2.20015 [ 3.20005] ((1 . 6) (2 . 7) (4 . 8) (6 . 9) (13 . 18)) 4.557 {0/6:10} B:0 SIMILARITY (1/min{score1}): 0.7774 [and 1/min{score2}: 0.5556] [2595, 2544]: Comparing 1isp_A and 1in4_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 24 (17 H + 7 S) secondary structure elements in 1in4_A, of which 7 satisfy the size requirements. 2.92858 [ 2.25255] ((2 . 18) (5 . 19) (6 . 22) (7 . 24)) 12.447 {1/5:6} B:0 SIMILARITY (1/min{score1}): 0.3415 [and 1/min{score2}: 0.4439] [2595, 2551]: Comparing 1isp_A and 1ioo_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 14 (7 H + 7 S) secondary structure elements in 1ioo_A, of which 13 satisfy the size requirements. 2.75031 [ 3.25019] ((6 . 1) (7 . 2) (14 . 5) (15 . 6)) 6.429 {0/3:6} B:0 2.75231 [ 3.25140] ((4 . 3) (7 . 4) (13 . 9) (14 . 10)) 10.594 {0/2:6} B:0 4.20700 [ 4.37876] ((1 . 3) (2 . 4) (5 . 6) (11 . 12)) 7.856 {2/5:6} B:0 5.11079 [ 5.20971] ((1 . 3) (5 . 6) (7 . 7) (11 . 11)) 8.351 {2/4:6} B:0 6.06519 [ 6.12522] ((2 . 7) (5 . 10) (6 . 11) (9 . 12)) 7.837 {3/5:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.3077] [2595, 2552]: Comparing 1isp_A and 1iow, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 25 (12 H + 13 S) secondary structure elements in 1iow, of which 7 satisfy the size requirements. 2.28587 [ 2.05570] ((1 . 1) (2 . 2) (4 . 3) (5 . 4) (6 . 5) (7 . 6)) 4.356 {1/5:15} B:0 2.75027 [ 1.75104] ((1 . 1) (2 . 2) (4 . 3) (5 . 6)) 6.191 {0/1:6} B:0 2.75134 [ 1.75516] ((4 . 1) (5 . 2) (7 . 4) (9 . 5)) 9.238 {0/1:6} B:0 2.75135 [ 1.75521] ((4 . 1) (5 . 2) (6 . 5) (7 . 6)) 9.262 {0/2:6} B:0 2.75144 [ 1.75556] ((5 . 2) (6 . 3) (7 . 4) (9 . 5)) 9.410 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.4544 [and 1/min{score2}: 0.7133] [2595, 2556]: Comparing 1isp_A and 1ipa_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 23 (12 H + 11 S) secondary structure elements in 1ipa_A, of which 12 satisfy the size requirements. 1.83409 [ 2.00058] ((1 . 11) (2 . 12) (4 . 13) (6 . 16) (9 . 18) (11 . 22)) 5.914 {0/7:15} B:0 2.20007 [ 2.40006] ((1 . 11) (2 . 12) (4 . 13) (6 . 18) (9 . 20)) 3.792 {0/4:10} B:0 2.20013 [ 2.40010] ((1 . 11) (2 . 12) (4 . 16) (6 . 18) (9 . 20)) 4.374 {0/4:10} B:0 2.20153 [ 2.40118] ((5 . 12) (6 . 13) (9 . 18) (11 . 20) (15 . 23)) 8.086 {0/2:10} B:0 2.20247 [ 2.40190] ((5 . 14) (7 . 17) (9 . 18) (11 . 20) (15 . 23)) 9.112 {0/4:10} B:0 SIMILARITY (1/min{score1}): 0.8895 [and 1/min{score2}: 0.8204] [2595, 2557]: Comparing 1isp_A and 1iq0_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 42 (23 H + 19 S) secondary structure elements in 1iq0_A, of which 7 satisfy the size requirements. 5.11076 [ 5.01876] ((2 . 1) (5 . 4) (6 . 6) (9 . 7)) 7.740 {2/4:6} B:0 5.11080 [ 5.01880] ((1 . 3) (2 . 5) (4 . 6) (5 . 8)) 8.418 {1/2:6} B:0 5.11087 [ 5.01888] ((2 . 1) (5 . 4) (7 . 5) (9 . 7)) 9.260 {2/4:6} B:0 10.01429 [10.00237] ((2 . 1) (5 . 4) (7 . 5) (9 . 6)) 9.142 {4/4:6} B:0 5.04630 [ 5.00777] ((1 . 3) (2 . 1) (5 . 4) (9 . 7) (11 . 6)) 7.574 {3/6:10} B:2 SIMILARITY (1/min{score1}): 0.1982 [and 1/min{score2}: 0.1997] [2595, 2561]: Comparing 1isp_A and 1iq6_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 9 (4 H + 5 S) secondary structure elements in 1iq6_A, of which 8 satisfy the size requirements. 2.75043 [ 2.00112] ((1 . 1) (5 . 5) (6 . 6) (9 . 8)) 6.957 {0/3:6} B:0 3.66624 [ 3.43658] ((1 . 1) (5 . 5) (6 . 7) (9 . 8)) 6.114 {1/3:6} B:0 3.66627 [ 3.43661] ((2 . 5) (4 . 6) (6 . 8) (9 . 9)) 6.466 {1/3:6} B:0 5.11101 [ 5.03207] ((4 . 1) (9 . 6) (11 . 7) (13 . 9)) 10.531 {1/2:6} B:0 6.71452 [ 6.68024] ((5 . 4) (6 . 6) (11 . 8) (13 . 9)) 9.749 {2/3:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.4997] [2595, 2591]: Comparing 1isp_A and 1is2_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 44 (33 H + 11 S) secondary structure elements in 1is2_A, of which 10 satisfy the size requirements. NO SIMILARITY! [2595, 2595]: Comparing 1isp_A and 1isp_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. 1.00000 [ 1.00000] ((1 . 1) (2 . 2) (4 . 4) (5 . 5) (6 . 6) (7 . 7) (9 . 9) (11 . 11) (13 . 13) (14 . 14) (15 . 15)) 0.000 {0/34:55} B:0 2.20012 [ 2.20012] ((2 . 2) (5 . 7) (6 . 9) (9 . 11) (11 . 13)) 4.245 {0/4:10} B:0 2.20094 [ 2.20094] ((5 . 2) (6 . 4) (9 . 6) (11 . 9) (13 . 11)) 7.151 {0/4:10} B:0 2.20094 [ 2.20094] ((2 . 5) (4 . 6) (6 . 9) (9 . 11) (11 . 13)) 7.151 {0/4:10} B:0 2.20270 [ 2.20270] ((4 . 1) (5 . 2) (6 . 4) (11 . 6) (13 . 9)) 9.319 {0/4:10} B:0 SIMILARITY (1/min{score1}): 1.0000 [and 1/min{score2}: 1.0000] [2595, 2619]: Comparing 1isp_A and 1iv0_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 7 (2 H + 5 S) secondary structure elements in 1iv0_A, of which 7 satisfy the size requirements. 1.83349 [ 1.16727] ((1 . 1) (4 . 3) (5 . 4) (6 . 5) (7 . 6) (9 . 7)) 3.980 {0/8:15} B:0 2.75010 [ 1.75039] ((4 . 1) (5 . 4) (6 . 5) (11 . 7)) 4.829 {0/3:6} B:0 2.75047 [ 1.75184] ((4 . 1) (6 . 3) (9 . 5) (11 . 7)) 7.129 {0/2:6} B:0 2.75252 [ 1.75970] ((9 . 1) (11 . 2) (14 . 4) (15 . 6)) 10.827 {0/2:6} B:0 3.66657 [ 3.39546] ((1 . 3) (2 . 4) (5 . 6) (6 . 7)) 8.660 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.5454 [and 1/min{score2}: 0.8567] [2595, 2627]: Comparing 1isp_A and 1ivs_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 68 (34 H + 34 S) secondary structure elements in 1ivs_A, of which 12 satisfy the size requirements. 2.75037 [ 3.00029] ((5 . 59) (6 . 60) (7 . 61) (9 . 64)) 6.717 {0/4:6} B:0 3.13278 [ 3.31064] ((5 . 59) (6 . 60) (7 . 62) (9 . 64)) 8.140 {1/4:6} B:0 3.66725 [ 3.78239] ((2 . 59) (5 . 61) (6 . 60) (7 . 62)) 10.946 {2/6:6} B:1 2.36249 [ 2.52895] ((1 . 64) (5 . 59) (6 . 65) (7 . 61) (9 . 60)) 5.024 {1/6:10} B:3 SIMILARITY (1/min{score1}): 0.4233 [and 1/min{score2}: 0.3954] [2595, 2634]: Comparing 1isp_A and 1iw0_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 13 (13 H + 0 S) secondary structure elements in 1iw0_A, of which 10 satisfy the size requirements. NO SIMILARITY! [2595, 2650]: Comparing 1isp_A and 1ixl_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 8 (2 H + 6 S) secondary structure elements in 1ixl_A, of which 7 satisfy the size requirements. 2.75038 [ 1.75147] ((4 . 2) (5 . 4) (6 . 5) (9 . 7)) 6.747 {0/4:6} B:0 2.75059 [ 1.75229] ((1 . 2) (2 . 4) (4 . 5) (6 . 7)) 7.535 {0/2:6} B:0 3.66656 [ 3.39545] ((4 . 2) (5 . 4) (6 . 5) (9 . 6)) 8.604 {1/3:6} B:0 5.11081 [ 5.01882] ((4 . 2) (5 . 4) (6 . 5) (11 . 8)) 8.593 {2/4:6} B:0 5.11103 [ 5.01904] ((4 . 1) (5 . 4) (9 . 6) (11 . 8)) 10.670 {2/4:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.5709] [2595, 2658]: Comparing 1isp_A and 1iyb_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 14 (8 H + 6 S) secondary structure elements in 1iyb_A, of which 13 satisfy the size requirements. 6.06521 [ 6.12524] ((2 . 8) (5 . 11) (6 . 12) (9 . 13)) 8.283 {3/5:6} B:0 SIMILARITY (1/min{score1}): 0.1649 [and 1/min{score2}: 0.1633] [2595, 2675]: Comparing 1isp_A and 1iz5_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 23 (5 H + 18 S) secondary structure elements in 1iz5_A, of which 11 satisfy the size requirements. 2.75075 [ 2.75075] ((1 . 1) (4 . 4) (6 . 8) (9 . 11)) 8.003 {0/3:6} B:0 2.75086 [ 2.75086] ((5 . 2) (6 . 3) (11 . 10) (13 . 12)) 8.278 {0/3:6} B:0 2.75222 [ 2.75222] ((4 . 5) (5 . 9) (6 . 10) (9 . 12)) 10.488 {0/3:6} B:0 3.13363 [ 3.13363] ((4 . 3) (6 . 5) (7 . 9) (11 . 12)) 10.293 {1/4:6} B:0 5.11097 [ 5.11097] ((5 . 2) (9 . 7) (11 . 10) (13 . 12)) 10.210 {1/2:6} B:0 SIMILARITY (1/min{score1}): 0.3635 [and 1/min{score2}: 0.3635] [2595, 2682]: Comparing 1isp_A and 1j09_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 34 (25 H + 9 S) secondary structure elements in 1j09_A, of which 19 satisfy the size requirements. 1.61387 [ 2.72282] ((1 . 1) (2 . 2) (4 . 3) (5 . 16) (6 . 17) (7 . 18) (9 . 19)) 3.738 {1/11:21} B:0 1.61398 [ 2.72284] ((1 . 1) (2 . 2) (4 . 3) (5 . 16) (6 . 17) (7 . 18) (11 . 19)) 4.201 {1/11:21} B:0 2.20086 [ 3.80017] ((1 . 1) (2 . 2) (4 . 3) (5 . 4) (15 . 16)) 7.001 {0/4:10} B:0 2.75003 [ 4.75001] ((4 . 1) (5 . 2) (6 . 3) (7 . 4)) 3.570 {0/3:6} B:0 2.75025 [ 4.75005] ((1 . 17) (2 . 18) (4 . 19) (7 . 22)) 6.095 {0/4:6} B:0 SIMILARITY (1/min{score1}): 0.7269 [and 1/min{score2}: 0.4547] [2595, 2696]: Comparing 1isp_A and 1j18_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 39 (21 H + 18 S) secondary structure elements in 1j18_A, of which 9 satisfy the size requirements. 2.75021 [ 2.25039] ((6 . 32) (7 . 33) (9 . 35) (11 . 38)) 5.847 {0/1:6} B:0 2.75034 [ 2.25061] ((1 . 31) (4 . 34) (6 . 36) (9 . 39)) 6.547 {0/2:6} B:0 2.75107 [ 2.25194] ((6 . 32) (7 . 33) (9 . 35) (11 . 37)) 8.732 {0/1:6} B:0 2.75197 [ 2.25359] ((6 . 31) (9 . 32) (11 . 35) (13 . 36)) 10.182 {0/1:6} B:0 3.66635 [ 3.49454] ((4 . 32) (5 . 33) (6 . 35) (9 . 38)) 7.259 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.4444] [2595, 2703]: Comparing 1isp_A and 1j1v_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 6 (6 H + 0 S) secondary structure elements in 1j1v_A, of which 6 satisfy the size requirements. NO SIMILARITY! [2595, 2731]: Comparing 1isp_A and 1j4w_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 12 (6 H + 6 S) secondary structure elements in 1j4w_A, of which 6 satisfy the size requirements. 2.75054 [ 1.50333] ((4 . 1) (5 . 2) (6 . 4) (9 . 5)) 7.372 {0/1:6} B:0 5.11105 [ 5.01052] ((1 . 4) (2 . 3) (4 . 5) (5 . 6)) 10.867 {1/2:6} B:1 5.11106 [ 5.01052] ((1 . 1) (2 . 2) (4 . 4) (5 . 3)) 10.879 {1/2:6} B:1 5.57198 [ 5.55704] ((1 . 5) (2 . 3) (4 . 4) (6 . 1) (14 . 2) (15 . 6)) 5.962 {5/9:15} B:2 6.02695 [ 6.00242] ((1 . 5) (4 . 4) (6 . 1) (14 . 2) (15 . 6)) 6.044 {3/5:10} B:2 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.6652] [2595, 2733]: Comparing 1isp_A and 1j54_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 14 (8 H + 6 S) secondary structure elements in 1j54_A, of which 12 satisfy the size requirements. 2.20054 [ 2.40041] ((1 . 1) (4 . 4) (9 . 8) (11 . 11) (15 . 14)) 6.220 {0/6:10} B:0 2.75010 [ 3.00008] ((1 . 1) (4 . 4) (6 . 8) (9 . 11)) 4.883 {0/3:6} B:0 2.75018 [ 3.00014] ((1 . 1) (4 . 4) (6 . 8) (11 . 11)) 5.570 {0/3:6} B:0 2.75087 [ 3.00067] ((2 . 7) (4 . 8) (5 . 9) (6 . 11)) 8.292 {0/3:6} B:0 2.75100 [ 3.00077] ((7 . 5) (11 . 8) (13 . 11) (15 . 13)) 8.584 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.6293 [and 1/min{score2}: 0.5787] [2595, 2753]: Comparing 1isp_A and 1j77_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 11 (11 H + 0 S) secondary structure elements in 1j77_A, of which 10 satisfy the size requirements. NO SIMILARITY! [2595, 2755]: Comparing 1isp_A and 1j7j_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 12 (4 H + 8 S) secondary structure elements in 1j7j_A, of which 10 satisfy the size requirements. 1.57162 [ 1.42882] ((1 . 3) (2 . 4) (4 . 5) (6 . 6) (7 . 7) (9 . 8) (11 . 10)) 3.724 {0/11:21} B:0 2.20016 [ 2.00021] ((1 . 3) (2 . 4) (5 . 7) (6 . 8) (9 . 10)) 4.588 {0/4:10} B:0 2.20016 [ 2.00021] ((2 . 4) (4 . 6) (5 . 7) (6 . 8) (9 . 10)) 4.605 {0/3:10} B:0 2.20031 [ 2.00042] ((1 . 3) (2 . 4) (4 . 5) (7 . 7) (9 . 10)) 5.436 {0/6:10} B:0 2.75008 [ 2.50011] ((5 . 2) (6 . 3) (7 . 4) (9 . 6)) 4.562 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.7271 [and 1/min{score2}: 0.7997] [2595, 2773]: Comparing 1isp_A and 1j98_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 9 (5 H + 4 S) secondary structure elements in 1j98_A, of which 8 satisfy the size requirements. 2.75067 [ 2.00175] ((1 . 2) (4 . 3) (5 . 4) (6 . 5)) 7.787 {0/1:6} B:0 2.75072 [ 2.00188] ((4 . 3) (5 . 4) (6 . 5) (9 . 6)) 7.928 {0/1:6} B:0 2.75090 [ 2.00234] ((1 . 3) (2 . 4) (4 . 5) (7 . 8)) 8.373 {0/4:6} B:0 2.75206 [ 2.00534] ((1 . 2) (4 . 3) (5 . 4) (6 . 6)) 10.298 {0/0:6} B:0 3.66669 [ 3.43712] ((7 . 4) (11 . 5) (13 . 6) (14 . 7)) 9.194 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.4090 [and 1/min{score2}: 0.4998] [2595, 2783]: Comparing 1isp_A and 1jak_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 37 (20 H + 17 S) secondary structure elements in 1jak_A, of which 7 satisfy the size requirements. 2.75021 [ 1.75083] ((5 . 4) (6 . 6) (9 . 8) (13 . 12)) 5.841 {0/3:6} B:0 2.75023 [ 1.75088] ((5 . 4) (9 . 6) (11 . 8) (13 . 12)) 5.935 {0/2:6} B:0 2.75040 [ 1.75153] ((7 . 4) (9 . 6) (11 . 8) (14 . 9)) 6.817 {0/1:6} B:0 3.66629 [ 3.39511] ((5 . 4) (6 . 6) (9 . 7) (13 . 12)) 6.727 {1/3:6} B:0 2.20277 [ 1.41065] ((2 . 4) (4 . 6) (5 . 9) (6 . 8) (9 . 12)) 9.381 {0/5:10} B:1 SIMILARITY (1/min{score1}): 0.4540 [and 1/min{score2}: 0.7089] [2595, 2804]: Comparing 1isp_A and 1jb7_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 40 (14 H + 26 S) secondary structure elements in 1jb7_A, of which 14 satisfy the size requirements. NO SIMILARITY! [2595, 2821]: Comparing 1isp_A and 1jce_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 32 (13 H + 19 S) secondary structure elements in 1jce_A, of which 12 satisfy the size requirements. 2.20047 [ 2.40036] ((1 . 1) (4 . 3) (7 . 10) (9 . 11) (11 . 13)) 6.006 {0/5:10} B:0 2.75023 [ 3.00017] ((9 . 1) (11 . 3) (13 . 5) (15 . 10)) 5.923 {0/0:6} B:0 2.75049 [ 3.00038] ((2 . 10) (4 . 11) (5 . 12) (6 . 13)) 7.197 {0/3:6} B:0 2.75090 [ 3.00069] ((9 . 1) (11 . 5) (13 . 7) (15 . 10)) 8.373 {0/0:6} B:0 2.92580 [ 3.13900] ((2 . 10) (5 . 12) (6 . 13) (7 . 14)) 8.704 {1/5:6} B:0 SIMILARITY (1/min{score1}): 0.4544 [and 1/min{score2}: 0.4166] [2595, 2830]: Comparing 1isp_A and 1jdp_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 27 (12 H + 15 S) secondary structure elements in 1jdp_A, of which 26 satisfy the size requirements. 1.83581 [ 4.33352] ((1 . 1) (5 . 2) (6 . 3) (9 . 5) (11 . 7) (13 . 9)) 7.961 {0/6:15} B:0 2.20010 [ 5.20001] ((2 . 2) (4 . 3) (5 . 4) (6 . 7) (9 . 9)) 4.089 {0/7:10} B:0 2.20012 [ 5.20001] ((2 . 12) (4 . 13) (5 . 16) (6 . 17) (9 . 19)) 4.248 {0/5:10} B:0 2.20017 [ 5.20001] ((2 . 12) (4 . 13) (5 . 16) (6 . 17) (11 . 19)) 4.668 {0/5:10} B:0 2.20021 [ 5.20002] ((2 . 2) (4 . 3) (5 . 6) (6 . 7) (9 . 9)) 4.923 {0/6:10} B:0 SIMILARITY (1/min{score1}): 0.8094 [and 1/min{score2}: 0.3674] [2595, 2834]: Comparing 1isp_A and 1je0_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 17 (8 H + 9 S) secondary structure elements in 1je0_A, of which 16 satisfy the size requirements. 2.20027 [ 3.20009] ((1 . 1) (2 . 2) (4 . 3) (5 . 7) (6 . 8)) 5.220 {0/4:10} B:0 2.20165 [ 3.20054] ((1 . 1) (2 . 2) (4 . 6) (5 . 7) (15 . 15)) 8.241 {0/5:10} B:0 2.20214 [ 3.20069] ((1 . 1) (2 . 2) (5 . 7) (6 . 8) (15 . 15)) 8.790 {0/5:10} B:0 2.75010 [ 4.00003] ((1 . 1) (2 . 2) (4 . 3) (7 . 7)) 4.890 {0/3:6} B:0 2.75015 [ 4.00005] ((2 . 2) (4 . 3) (7 . 7) (9 . 8)) 5.384 {0/4:6} B:0 SIMILARITY (1/min{score1}): 0.7042 [and 1/min{score2}: 0.4962] [2595, 2840]: Comparing 1isp_A and 1jer, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 11 (4 H + 7 S) secondary structure elements in 1jer, of which 10 satisfy the size requirements. 2.75030 [ 2.50040] ((4 . 1) (5 . 3) (6 . 5) (11 . 9)) 6.353 {0/4:6} B:0 2.75051 [ 2.50068] ((2 . 2) (6 . 6) (7 . 7) (11 . 11)) 7.271 {0/3:6} B:0 2.75178 [ 2.50237] ((5 . 2) (9 . 6) (11 . 8) (13 . 11)) 9.931 {0/2:6} B:0 3.66635 [ 3.57071] ((4 . 1) (5 . 3) (6 . 5) (7 . 7)) 7.276 {1/3:6} B:0 3.66642 [ 3.57079] ((2 . 2) (5 . 7) (9 . 9) (11 . 11)) 7.797 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.4545 [and 1/min{score2}: 0.4998] [2595, 2842]: Comparing 1isp_A and 1jey_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 37 (18 H + 19 S) secondary structure elements in 1jey_A, of which 12 satisfy the size requirements. 2.20046 [ 2.40036] ((2 . 3) (4 . 4) (9 . 9) (13 . 11) (15 . 13)) 5.991 {0/5:10} B:0 2.75008 [ 3.00006] ((1 . 4) (5 . 8) (6 . 9) (11 . 11)) 4.517 {0/3:6} B:0 2.75012 [ 3.00009] ((5 . 8) (6 . 9) (7 . 10) (9 . 11)) 5.028 {0/2:6} B:0 2.75013 [ 3.00010] ((4 . 1) (5 . 3) (6 . 4) (14 . 8)) 5.198 {0/0:6} B:0 2.75025 [ 3.00019] ((2 . 3) (4 . 4) (11 . 9) (13 . 11)) 6.093 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.5453 [and 1/min{score2}: 0.4999] [2595, 2867]: Comparing 1isp_A and 1jhd_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 30 (15 H + 15 S) secondary structure elements in 1jhd_A, of which 11 satisfy the size requirements. 3.66622 [ 3.66622] ((1 . 2) (6 . 7) (9 . 8) (14 . 13)) 5.719 {1/3:6} B:0 4.08860 [ 4.08860] ((1 . 2) (6 . 7) (9 . 8) (14 . 13) (15 . 1)) 6.022 {2/5:10} B:1 8.18463 [ 8.18463] ((1 . 2) (2 . 3) (4 . 8) (5 . 1) (6 . 7) (9 . 9) (11 . 12)) 8.191 {9/11:21} B:1 6.01305 [ 6.01305] ((1 . 7) (2 . 3) (5 . 1) (6 . 8) (9 . 12) (13 . 9)) 5.710 {6/10:15} B:3 6.01306 [ 6.01306] ((1 . 7) (2 . 3) (5 . 1) (6 . 8) (11 . 12) (13 . 9)) 6.167 {6/10:15} B:3 SIMILARITY (1/min{score1}): 0.2728 [and 1/min{score2}: 0.2728] [2595, 2879]: Comparing 1isp_A and 1ji1_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 59 (24 H + 35 S) secondary structure elements in 1ji1_A, of which 9 satisfy the size requirements. 2.75052 [ 2.25095] ((1 . 51) (4 . 53) (5 . 55) (6 . 58)) 7.299 {0/2:6} B:0 3.66631 [ 3.49449] ((4 . 51) (6 . 53) (9 . 56) (11 . 59)) 6.858 {1/3:6} B:0 3.66637 [ 3.49457] ((4 . 51) (6 . 53) (7 . 55) (9 . 56)) 7.450 {1/3:6} B:0 10.01429 [10.00642] ((1 . 51) (4 . 53) (5 . 55) (6 . 57)) 8.534 {2/2:6} B:0 10.01429 [10.00642] ((1 . 52) (4 . 54) (5 . 55) (6 . 59)) 8.848 {1/1:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.4443] [2595, 2886]: Comparing 1isp_A and 1ji6_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 44 (19 H + 25 S) secondary structure elements in 1ji6_A, of which 10 satisfy the size requirements. 2.75035 [ 2.50046] ((1 . 35) (4 . 38) (6 . 43) (9 . 44)) 6.590 {0/1:6} B:0 2.75050 [ 2.50067] ((1 . 35) (4 . 38) (6 . 41) (9 . 44)) 7.232 {0/2:6} B:0 2.75075 [ 2.50100] ((1 . 34) (4 . 37) (6 . 39) (9 . 43)) 8.009 {0/3:6} B:0 2.75091 [ 2.50122] ((6 . 30) (9 . 34) (11 . 37) (13 . 39)) 8.403 {0/1:6} B:0 3.66639 [ 3.57076] ((4 . 30) (6 . 34) (9 . 37) (11 . 39)) 7.591 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.3999] [2595, 2929]: Comparing 1isp_A and 1jjc_B, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 66 (25 H + 41 S) secondary structure elements in 1jjc_B, of which 6 satisfy the size requirements. 6.06522 [ 6.00595] ((4 . 36) (5 . 38) (6 . 39) (7 . 41)) 8.624 {3/5:6} B:0 2.75012 [ 1.50073] ((6 . 36) (7 . 38) (9 . 40) (11 . 39)) 5.041 {0/0:6} B:1 3.13266 [ 2.57809] ((4 . 36) (5 . 37) (6 . 39) (7 . 38)) 7.631 {1/4:6} B:1 3.66633 [ 3.36725] ((5 . 37) (6 . 36) (7 . 38) (9 . 39)) 7.094 {1/3:6} B:1 5.11068 [ 5.01012] ((1 . 36) (6 . 39) (7 . 38) (9 . 40)) 5.569 {1/2:6} B:1 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.6663] [2595, 2940]: Comparing 1isp_A and 1jk3_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 10 (3 H + 7 S) secondary structure elements in 1jk3_A, of which 8 satisfy the size requirements. 2.20015 [ 1.60039] ((6 . 1) (9 . 3) (11 . 4) (13 . 6) (15 . 9)) 4.511 {0/0:10} B:0 2.75006 [ 2.00016] ((1 . 1) (2 . 2) (4 . 3) (9 . 6)) 4.277 {0/2:6} B:0 2.75009 [ 2.00024] ((1 . 1) (2 . 2) (6 . 4) (9 . 6)) 4.735 {0/2:6} B:0 2.75034 [ 2.00088] ((1 . 1) (2 . 2) (4 . 3) (7 . 9)) 6.546 {0/3:6} B:0 2.75152 [ 2.00395] ((5 . 2) (6 . 4) (9 . 6) (15 . 10)) 9.545 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.4545 [and 1/min{score2}: 0.6248] [2595, 2947]: Comparing 1isp_A and 1jks_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 22 (13 H + 9 S) secondary structure elements in 1jks_A, of which 16 satisfy the size requirements. 2.75005 [ 4.00002] ((4 . 2) (6 . 4) (7 . 5) (9 . 6)) 4.003 {0/3:6} B:0 2.81258 [ 3.46416] ((1 . 4) (2 . 5) (4 . 6) (11 . 13) (14 . 17)) 8.751 {1/4:10} B:0 3.66733 [ 4.41426] ((2 . 5) (7 . 8) (11 . 13) (15 . 17)) 11.145 {1/3:6} B:0 10.01431 [10.06344] ((1 . 4) (2 . 5) (4 . 6) (7 . 9)) 10.470 {3/3:6} B:0 4.08857 [ 4.35851] ((1 . 3) (4 . 2) (6 . 4) (9 . 7) (11 . 6)) 5.305 {2/5:10} B:2 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.2887] [2595, 2950]: Comparing 1isp_A and 1jkw, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 13 (13 H + 0 S) secondary structure elements in 1jkw, of which 7 satisfy the size requirements. NO SIMILARITY! [2595, 2955]: Comparing 1isp_A and 1jl5_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 20 (2 H + 18 S) secondary structure elements in 1jl5_A, of which 18 satisfy the size requirements. 2.20024 [ 3.60005] ((5 . 2) (6 . 3) (9 . 4) (11 . 5) (13 . 6)) 5.070 {0/0:10} B:0 2.75006 [ 4.50001] ((7 . 2) (9 . 3) (11 . 4) (13 . 5)) 4.168 {0/0:6} B:0 2.75006 [ 4.50001] ((7 . 2) (9 . 3) (11 . 5) (13 . 6)) 4.337 {0/0:6} B:0 2.75007 [ 4.50001] ((7 . 2) (9 . 3) (11 . 4) (13 . 6)) 4.341 {0/0:6} B:0 2.75007 [ 4.50002] ((6 . 13) (9 . 15) (11 . 17) (13 . 19)) 4.356 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.5454 [and 1/min{score2}: 0.3333] [2595, 2966]: Comparing 1isp_A and 1jm1_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 19 (5 H + 14 S) secondary structure elements in 1jm1_A, of which 17 satisfy the size requirements. 2.75016 [ 4.25004] ((4 . 1) (6 . 4) (11 . 10) (13 . 13)) 5.419 {0/4:6} B:0 2.75043 [ 4.25012] ((2 . 2) (4 . 3) (9 . 9) (11 . 12)) 6.973 {0/4:6} B:0 2.75159 [ 4.25043] ((1 . 6) (4 . 9) (6 . 12) (11 . 17)) 9.652 {0/1:6} B:0 2.75165 [ 4.25045] ((2 . 5) (4 . 6) (9 . 12) (11 . 16)) 9.739 {0/3:6} B:0 2.75189 [ 4.25051] ((2 . 2) (4 . 3) (5 . 5) (9 . 9)) 10.081 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.2955] [2595, 2990]: Comparing 1isp_A and 1jn3_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 22 (13 H + 9 S) secondary structure elements in 1jn3_A, of which 13 satisfy the size requirements. 2.75107 [ 3.25065] ((2 . 8) (4 . 9) (5 . 10) (13 . 19)) 8.730 {0/4:6} B:0 2.75174 [ 3.25105] ((4 . 12) (5 . 13) (9 . 16) (15 . 21)) 9.866 {0/2:6} B:0 3.13275 [ 3.50366] ((5 . 8) (6 . 9) (7 . 10) (13 . 15)) 8.015 {1/4:6} B:0 3.66639 [ 3.91562] ((5 . 8) (6 . 9) (7 . 10) (15 . 18)) 7.563 {1/3:6} B:0 3.66651 [ 3.91572] ((2 . 8) (5 . 10) (6 . 12) (15 . 17)) 8.339 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.4543 [and 1/min{score2}: 0.3845] [2595, 2999]: Comparing 1isp_A and 1jo0_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 7 (3 H + 4 S) secondary structure elements in 1jo0_A, of which 7 satisfy the size requirements. 2.20079 [ 1.40305] ((1 . 2) (2 . 3) (4 . 4) (5 . 5) (6 . 6)) 6.851 {0/3:10} B:0 2.75009 [ 1.75034] ((4 . 2) (5 . 3) (6 . 4) (9 . 6)) 4.658 {0/2:6} B:0 2.75043 [ 1.75165] ((7 . 1) (11 . 2) (13 . 4) (14 . 5)) 6.938 {0/3:6} B:0 2.75059 [ 1.75228] ((7 . 1) (9 . 2) (11 . 4) (14 . 5)) 7.524 {0/3:6} B:0 6.71442 [ 6.67458] ((2 . 1) (4 . 4) (5 . 5) (6 . 6)) 5.796 {2/3:6} B:0 SIMILARITY (1/min{score1}): 0.5454 [and 1/min{score2}: 0.8564] [2595, 3014]: Comparing 1isp_A and 1jpz_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 35 (23 H + 12 S) secondary structure elements in 1jpz_A, of which 27 satisfy the size requirements. 3.13570 [ 6.78187] ((2 . 12) (5 . 15) (14 . 20) (15 . 21)) 12.926 {1/4:6} B:0 6.06531 [ 7.62036] ((2 . 21) (5 . 26) (6 . 25) (13 . 34)) 10.251 {3/5:6} B:1 5.04646 [ 6.19769] ((2 . 21) (5 . 6) (7 . 14) (9 . 34) (14 . 18)) 9.624 {4/8:10} B:2 7.15900 [ 7.66597] ((2 . 10) (5 . 14) (9 . 34) (14 . 31) (15 . 21)) 10.524 {5/7:10} B:2 SIMILARITY (1/min{score1}): 0.3189 [and 1/min{score2}: 0.1614] [2595, 3019]: Comparing 1isp_A and 1jqg_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 26 (14 H + 12 S) secondary structure elements in 1jqg_A, of which 16 satisfy the size requirements. 2.20031 [ 3.20010] ((1 . 14) (5 . 18) (6 . 19) (13 . 25) (15 . 26)) 5.417 {0/4:10} B:0 2.75044 [ 4.00014] ((1 . 14) (7 . 18) (9 . 19) (15 . 24)) 6.991 {0/1:6} B:0 2.75069 [ 4.00022] ((7 . 8) (9 . 9) (14 . 12) (15 . 13)) 7.837 {0/2:6} B:0 2.75111 [ 4.00036] ((2 . 18) (4 . 19) (11 . 25) (15 . 26)) 8.820 {0/2:6} B:0 3.66635 [ 4.41370] ((1 . 14) (9 . 20) (13 . 25) (15 . 26)) 7.298 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.6822 [and 1/min{score2}: 0.4922] [2595, 3034]: Comparing 1isp_A and 1jrl_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 15 (10 H + 5 S) secondary structure elements in 1jrl_A, of which 10 satisfy the size requirements. 1.37590 [ 1.25120] ((1 . 1) (2 . 4) (4 . 5) (5 . 6) (6 . 7) (7 . 8) (9 . 9) (15 . 15)) 4.984 {0/10:28} B:0 1.57174 [ 1.42899] ((1 . 1) (2 . 4) (4 . 5) (5 . 6) (6 . 7) (9 . 9) (15 . 15)) 4.218 {0/9:21} B:0 1.57218 [ 1.42957] ((1 . 1) (2 . 4) (4 . 5) (5 . 6) (6 . 7) (11 . 9) (15 . 15)) 5.260 {0/9:21} B:0 2.08838 [ 1.98227] ((1 . 1) (2 . 4) (4 . 5) (5 . 6) (9 . 9) (14 . 15)) 4.798 {1/6:15} B:0 2.20103 [ 2.00137] ((2 . 6) (4 . 7) (5 . 8) (6 . 9) (7 . 11)) 7.323 {0/1:10} B:0 SIMILARITY (1/min{score1}): 0.7269 [and 1/min{score2}: 0.7994] [2595, 3041]: Comparing 1isp_A and 1js3_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 34 (23 H + 11 S) secondary structure elements in 1js3_A, of which 27 satisfy the size requirements. 1.83355 [ 4.50001] ((4 . 12) (5 . 15) (6 . 16) (7 . 17) (9 . 18) (11 . 22)) 4.338 {0/4:15} B:0 1.83363 [ 4.50002] ((1 . 12) (2 . 13) (4 . 16) (5 . 17) (6 . 18) (9 . 22)) 4.690 {0/5:15} B:0 2.20006 [ 5.40000] ((1 . 12) (2 . 13) (4 . 14) (5 . 15) (6 . 18)) 3.557 {0/3:10} B:0 2.20006 [ 5.40000] ((5 . 15) (6 . 16) (7 . 17) (11 . 18) (13 . 22)) 3.593 {0/3:10} B:0 2.20017 [ 5.40001] ((1 . 12) (2 . 13) (5 . 15) (6 . 18) (9 . 22)) 4.692 {0/5:10} B:0 SIMILARITY (1/min{score1}): 0.7997 [and 1/min{score2}: 0.3331] [2595, 3055]: Comparing 1isp_A and 1jtd_B, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 28 (7 H + 21 S) secondary structure elements in 1jtd_B, of which 21 satisfy the size requirements. 2.66405 [ 3.70846] ((1 . 16) (4 . 17) (6 . 19) (9 . 23) (11 . 24) (13 . 25)) 5.117 {1/4:15} B:0 2.75006 [ 5.25001] ((6 . 4) (9 . 7) (11 . 8) (13 . 12)) 4.166 {0/0:6} B:0 2.75011 [ 5.25002] ((6 . 5) (9 . 7) (11 . 11) (13 . 13)) 4.928 {0/1:6} B:0 2.75011 [ 5.25002] ((6 . 17) (9 . 19) (11 . 23) (13 . 25)) 4.961 {0/1:6} B:0 2.75011 [ 5.25002] ((6 . 13) (9 . 15) (11 . 19) (13 . 21)) 4.990 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.5453 [and 1/min{score2}: 0.2857] [2595, 3063]: Comparing 1isp_A and 1ju3_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 46 (19 H + 27 S) secondary structure elements in 1ju3_A, of which 13 satisfy the size requirements. 2.75075 [ 3.25045] ((6 . 35) (9 . 38) (11 . 39) (13 . 41)) 7.984 {0/1:6} B:0 2.75166 [ 3.25100] ((1 . 38) (4 . 41) (9 . 45) (11 . 46)) 9.753 {0/4:6} B:0 2.75196 [ 3.25119] ((6 . 37) (9 . 38) (11 . 41) (13 . 42)) 10.169 {0/1:6} B:0 2.75201 [ 3.25122] ((1 . 35) (4 . 38) (11 . 45) (13 . 46)) 10.232 {0/3:6} B:0 2.75206 [ 3.25125] ((4 . 35) (6 . 38) (9 . 41) (11 . 42)) 10.297 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.4539 [and 1/min{score2}: 0.3844] [2595, 3070]: Comparing 1isp_A and 1jva_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 42 (13 H + 29 S) secondary structure elements in 1jva_A, of which 8 satisfy the size requirements. 10.01430 [10.00403] ((1 . 33) (2 . 34) (4 . 35) (5 . 37)) 9.633 {1/1:6} B:0 2.20262 [ 1.60677] ((1 . 33) (4 . 36) (5 . 31) (14 . 34) (15 . 30)) 9.249 {0/1:10} B:2 SIMILARITY (1/min{score1}): 0.4540 [and 1/min{score2}: 0.6224] [2595, 3084]: Comparing 1isp_A and 1jx6_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 25 (13 H + 12 S) secondary structure elements in 1jx6_A, of which 24 satisfy the size requirements. 1.57685 [ 3.42910] ((1 . 3) (5 . 4) (6 . 5) (7 . 6) (9 . 7) (11 . 9) (15 . 10)) 8.627 {0/2:21} B:0 2.20005 [ 4.80001] ((6 . 5) (7 . 6) (9 . 7) (11 . 9) (13 . 11)) 3.486 {0/1:10} B:0 2.20006 [ 4.80001] ((2 . 4) (4 . 5) (5 . 6) (6 . 9) (9 . 11)) 3.664 {0/6:10} B:0 2.20009 [ 4.80001] ((1 . 3) (2 . 4) (4 . 5) (6 . 9) (9 . 11)) 4.027 {0/5:10} B:0 2.20010 [ 4.80001] ((1 . 3) (2 . 4) (4 . 5) (6 . 7) (9 . 11)) 4.115 {0/3:10} B:0 SIMILARITY (1/min{score1}): 0.9084 [and 1/min{score2}: 0.4167] [2595, 3102]: Comparing 1isp_A and 1jz7_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 82 (21 H + 61 S) secondary structure elements in 1jz7_A, of which 22 satisfy the size requirements. 2.75081 [ 5.50010] ((4 . 72) (7 . 78) (11 . 80) (13 . 82)) 8.156 {0/2:6} B:0 2.75096 [ 5.50012] ((1 . 57) (4 . 59) (6 . 62) (13 . 69)) 8.506 {0/3:6} B:0 2.75102 [ 5.50013] ((1 . 65) (4 . 68) (6 . 70) (13 . 77)) 8.638 {0/4:6} B:0 2.75128 [ 5.50016] ((1 . 70) (4 . 72) (7 . 78) (13 . 82)) 9.146 {0/3:6} B:0 2.75129 [ 5.50016] ((1 . 70) (4 . 72) (7 . 78) (11 . 82)) 9.153 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.3635 [and 1/min{score2}: 0.2593] [2595, 3103]: Comparing 1isp_A and 1jzg_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 13 (5 H + 8 S) secondary structure elements in 1jzg_A, of which 10 satisfy the size requirements. 2.75069 [ 2.50092] ((4 . 5) (5 . 6) (6 . 9) (11 . 13)) 7.845 {0/4:6} B:0 2.75140 [ 2.50187] ((6 . 2) (9 . 5) (13 . 9) (15 . 12)) 9.353 {0/1:6} B:0 3.13308 [ 2.97400] ((4 . 2) (6 . 5) (7 . 6) (13 . 13)) 9.068 {1/4:6} B:0 3.13381 [ 2.97485] ((1 . 5) (2 . 6) (7 . 12) (9 . 13)) 10.609 {1/4:6} B:0 2.75115 [ 2.50153] ((2 . 6) (4 . 5) (6 . 9) (9 . 13)) 8.905 {0/4:6} B:1 SIMILARITY (1/min{score1}): 0.3635 [and 1/min{score2}: 0.3999] [2595, 3114]: Comparing 1isp_A and 1k0i_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 38 (17 H + 21 S) secondary structure elements in 1k0i_A, of which 8 satisfy the size requirements. 3.13622 [ 2.73010] ((1 . 21) (4 . 23) (7 . 27) (9 . 29)) 13.394 {1/4:6} B:0 SIMILARITY (1/min{score1}): 0.3189 [and 1/min{score2}: 0.3663] [2595, 3120]: Comparing 1isp_A and 1k0r_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 25 (12 H + 13 S) secondary structure elements in 1k0r_A, of which 6 satisfy the size requirements. 10.01427 [10.00127] ((5 . 20) (6 . 22) (7 . 23) (9 . 25)) 5.183 {4/4:6} B:0 10.01428 [10.00127] ((5 . 20) (7 . 23) (9 . 22) (11 . 25)) 6.906 {3/3:6} B:1 SIMILARITY (1/min{score1}): 0.0999 [and 1/min{score2}: 0.0999] [2595, 3127]: Comparing 1isp_A and 1k1e_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 18 (10 H + 8 S) secondary structure elements in 1k1e_A, of which 15 satisfy the size requirements. 1.57223 [ 2.14317] ((1 . 2) (2 . 5) (4 . 6) (5 . 9) (6 . 11) (11 . 13) (14 . 16)) 5.350 {0/7:21} B:0 1.83344 [ 2.50004] ((1 . 6) (2 . 7) (4 . 8) (5 . 9) (6 . 11) (7 . 12)) 3.587 {0/7:15} B:0 1.83376 [ 2.50017] ((1 . 2) (2 . 5) (4 . 6) (6 . 11) (11 . 13) (14 . 16)) 5.135 {0/4:15} B:0 2.20003 [ 3.00001] ((4 . 6) (5 . 9) (6 . 11) (7 . 12) (9 . 13)) 3.090 {0/6:10} B:0 2.20006 [ 3.00002] ((4 . 8) (5 . 9) (6 . 11) (7 . 12) (9 . 13)) 3.633 {0/6:10} B:0 SIMILARITY (1/min{score1}): 0.8993 [and 1/min{score2}: 0.6646] [2595, 3147]: Comparing 1isp_A and 1k32_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 94 (19 H + 75 S) secondary structure elements in 1k32_A, of which 25 satisfy the size requirements. 2.75011 [ 6.25001] ((6 . 5) (9 . 7) (11 . 11) (13 . 13)) 4.936 {0/1:6} B:0 2.75020 [ 6.25002] ((6 . 1) (9 . 2) (11 . 5) (13 . 7)) 5.747 {0/1:6} B:0 2.75022 [ 6.25002] ((4 . 2) (6 . 6) (9 . 8) (11 . 12)) 5.871 {0/1:6} B:0 2.75044 [ 6.25004] ((6 . 4) (9 . 6) (11 . 8) (13 . 12)) 6.984 {0/1:6} B:0 2.75044 [ 6.25004] ((6 . 16) (9 . 18) (11 . 20) (13 . 22)) 7.004 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.1970] [2595, 3176]: Comparing 1isp_A and 1k4t_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 39 (24 H + 15 S) secondary structure elements in 1k4t_A, of which 14 satisfy the size requirements. 2.92858 [ 3.59176] ((2 . 22) (5 . 23) (9 . 29) (15 . 32)) 12.448 {1/5:6} B:0 3.13470 [ 3.70989] ((2 . 21) (5 . 23) (9 . 26) (11 . 29)) 11.867 {1/4:6} B:0 5.11598 [ 5.28120] ((2 . 23) (4 . 26) (6 . 29) (15 . 34)) 20.785 {2/4:6} B:0 SIMILARITY (1/min{score1}): 0.3415 [and 1/min{score2}: 0.2784] [2595, 3187]: Comparing 1isp_A and 1k5w_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 10 (2 H + 8 S) secondary structure elements in 1k5w_A, of which 10 satisfy the size requirements. 2.75026 [ 2.50034] ((1 . 2) (4 . 4) (6 . 6) (11 . 9)) 6.120 {0/3:6} B:0 2.75050 [ 2.50066] ((1 . 6) (2 . 8) (4 . 9) (5 . 10)) 7.220 {0/2:6} B:0 2.75077 [ 2.50103] ((4 . 1) (6 . 3) (9 . 5) (11 . 7)) 8.059 {0/3:6} B:0 2.75100 [ 2.50133] ((1 . 2) (4 . 4) (7 . 8) (9 . 9)) 8.585 {0/4:6} B:0 2.75143 [ 2.50191] ((1 . 4) (4 . 6) (7 . 8) (9 . 9)) 9.406 {0/4:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.3999] [2595, 3190]: Comparing 1isp_A and 1k68_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 12 (7 H + 5 S) secondary structure elements in 1k68_A, of which 10 satisfy the size requirements. 1.22258 [ 1.11158] ((1 . 1) (2 . 2) (4 . 3) (5 . 4) (6 . 6) (7 . 7) (9 . 9) (11 . 11) (15 . 12)) 3.605 {0/16:36} B:0 2.20015 [ 2.00020] ((1 . 1) (2 . 2) (5 . 7) (6 . 9) (9 . 11)) 4.537 {0/4:10} B:0 2.20023 [ 2.00030] ((1 . 1) (2 . 2) (4 . 3) (5 . 7) (9 . 11)) 5.022 {0/4:10} B:0 2.20150 [ 2.00200] ((5 . 2) (7 . 4) (9 . 6) (13 . 9) (15 . 12)) 8.047 {0/4:10} B:0 2.20162 [ 2.00216] ((1 . 3) (2 . 4) (4 . 6) (5 . 10) (6 . 11)) 8.207 {0/3:10} B:0 SIMILARITY (1/min{score1}): 0.8179 [and 1/min{score2}: 0.8996] [2595, 3197]: Comparing 1isp_A and 1k75_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 34 (20 H + 14 S) secondary structure elements in 1k75_A, of which 31 satisfy the size requirements. 1.83348 [ 5.16667] ((1 . 10) (2 . 11) (4 . 12) (5 . 15) (6 . 16) (7 . 17)) 3.911 {0/4:15} B:0 1.83357 [ 5.16668] ((1 . 21) (2 . 22) (4 . 24) (5 . 25) (7 . 27) (9 . 28)) 4.400 {0/9:15} B:0 1.83550 [ 5.16676] ((1 . 10) (2 . 11) (4 . 12) (5 . 13) (6 . 14) (9 . 16)) 7.695 {0/4:15} B:0 2.20099 [ 6.20004] ((1 . 10) (2 . 11) (4 . 12) (5 . 13) (6 . 16)) 7.247 {0/3:10} B:0 2.20108 [ 6.20005] ((1 . 21) (2 . 22) (4 . 24) (5 . 25) (7 . 29)) 7.411 {0/6:10} B:0 SIMILARITY (1/min{score1}): 0.9042 [and 1/min{score2}: 0.3505] [2595, 3200]: Comparing 1isp_A and 1k7j_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 19 (9 H + 10 S) secondary structure elements in 1k7j_A, of which 16 satisfy the size requirements. 2.75012 [ 4.00004] ((2 . 12) (4 . 13) (5 . 14) (6 . 15)) 5.017 {0/3:6} B:0 2.75022 [ 4.00007] ((6 . 1) (7 . 2) (9 . 3) (11 . 6)) 5.918 {0/1:6} B:0 2.75037 [ 4.00012] ((6 . 1) (7 . 2) (9 . 4) (11 . 6)) 6.699 {0/1:6} B:0 2.75159 [ 4.00052] ((2 . 8) (4 . 9) (5 . 12) (6 . 13)) 9.647 {0/3:6} B:0 2.75173 [ 4.00056] ((6 . 1) (7 . 2) (9 . 3) (15 . 7)) 9.857 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.3212] [2595, 3202]: Comparing 1isp_A and 1k7w_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 30 (22 H + 8 S) secondary structure elements in 1k7w_A, of which 24 satisfy the size requirements. NO SIMILARITY! [2595, 3212]: Comparing 1isp_A and 1k8k_D, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 21 (11 H + 10 S) secondary structure elements in 1k8k_D, of which 9 satisfy the size requirements. 2.75173 [ 2.25316] ((2 . 1) (4 . 3) (5 . 7) (6 . 9)) 9.864 {0/0:6} B:0 2.75196 [ 2.25357] ((5 . 1) (9 . 3) (13 . 9) (15 . 10)) 10.168 {0/0:6} B:0 2.75215 [ 2.25393] ((5 . 1) (9 . 3) (13 . 9) (14 . 10)) 10.413 {0/1:6} B:0 3.66651 [ 3.49473] ((2 . 1) (4 . 2) (6 . 5) (7 . 6)) 8.353 {1/3:6} B:0 6.71446 [ 6.68825] ((2 . 1) (5 . 10) (6 . 5) (7 . 6)) 8.235 {2/3:6} B:1 SIMILARITY (1/min{score1}): 0.3634 [and 1/min{score2}: 0.4438] [2595, 3222]: Comparing 1isp_A and 1k8w_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 29 (10 H + 19 S) secondary structure elements in 1k8w_A, of which 20 satisfy the size requirements. 2.75135 [ 5.00023] ((1 . 1) (2 . 2) (4 . 3) (13 . 14)) 9.269 {0/4:6} B:0 2.75150 [ 5.00025] ((4 . 1) (5 . 2) (6 . 3) (9 . 6)) 9.511 {0/3:6} B:0 2.75452 [ 5.00075] ((1 . 16) (2 . 17) (4 . 18) (5 . 22)) 12.539 {0/1:6} B:0 2.75526 [ 5.00088] ((2 . 5) (4 . 7) (11 . 16) (13 . 19)) 13.020 {0/4:6} B:0 2.75588 [ 5.00098] ((4 . 6) (5 . 9) (11 . 16) (14 . 17)) 13.389 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.2693] [2595, 3256]: Comparing 1isp_A and 1kbv_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 28 (6 H + 22 S) secondary structure elements in 1kbv_A, of which 13 satisfy the size requirements. 2.75102 [ 3.25062] ((6 . 13) (9 . 16) (11 . 19) (13 . 21)) 8.639 {0/1:6} B:0 3.13410 [ 3.50463] ((2 . 15) (4 . 16) (6 . 20) (11 . 28)) 11.073 {1/4:6} B:0 5.11079 [ 5.20971] ((1 . 16) (4 . 19) (6 . 24) (7 . 27)) 8.275 {2/4:6} B:0 5.11100 [ 5.20991] ((5 . 15) (9 . 19) (13 . 26) (14 . 27)) 10.476 {2/4:6} B:0 5.11107 [ 5.20997] ((6 . 13) (7 . 15) (11 . 19) (13 . 21)) 10.970 {1/2:6} B:0 SIMILARITY (1/min{score1}): 0.3635 [and 1/min{score2}: 0.3076] [2595, 3261]: Comparing 1isp_A and 1kcg_C, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 12 (4 H + 8 S) secondary structure elements in 1kcg_C, of which 11 satisfy the size requirements. 2.20479 [ 2.20479] ((1 . 1) (4 . 3) (9 . 7) (11 . 9) (15 . 12)) 10.760 {0/5:10} B:0 3.66816 [ 3.66816] ((2 . 5) (4 . 7) (5 . 10) (7 . 11)) 12.715 {1/3:6} B:0 2.20999 [ 2.20999] ((4 . 1) (11 . 7) (13 . 9) (14 . 11) (15 . 10)) 12.944 {0/5:10} B:1 2.75113 [ 2.75113] ((1 . 7) (2 . 10) (4 . 9) (5 . 11)) 8.860 {0/2:6} B:1 5.11106 [ 5.11106] ((1 . 7) (2 . 10) (4 . 9) (5 . 12)) 10.888 {1/2:6} B:1 SIMILARITY (1/min{score1}): 0.4536 [and 1/min{score2}: 0.4536] [2595, 3286]: Comparing 1isp_A and 1kfs_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 43 (29 H + 14 S) secondary structure elements in 1kfs_A, of which 12 satisfy the size requirements. 2.75034 [ 3.00026] ((1 . 3) (4 . 5) (6 . 7) (15 . 15)) 6.552 {0/3:6} B:0 2.75035 [ 3.00027] ((1 . 3) (6 . 7) (9 . 9) (15 . 15)) 6.613 {0/2:6} B:0 2.75037 [ 3.00028] ((5 . 2) (11 . 7) (13 . 9) (14 . 15)) 6.686 {0/4:6} B:0 2.75060 [ 3.00046] ((2 . 2) (6 . 7) (9 . 9) (15 . 15)) 7.551 {0/2:6} B:0 2.75077 [ 3.00059] ((2 . 2) (7 . 6) (9 . 7) (11 . 9)) 8.050 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.4544 [and 1/min{score2}: 0.4166] [2595, 3289]: Comparing 1isp_A and 1kfw_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 35 (17 H + 18 S) secondary structure elements in 1kfw_A, of which 6 satisfy the size requirements. NO SIMILARITY! [2595, 3297]: Comparing 1isp_A and 1kgy_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 13 (1 H + 12 S) secondary structure elements in 1kgy_A, of which 10 satisfy the size requirements. 2.75051 [ 2.50068] ((1 . 7) (4 . 8) (6 . 11) (9 . 13)) 7.262 {0/2:6} B:0 2.75057 [ 2.50075] ((1 . 5) (4 . 8) (9 . 11) (11 . 13)) 7.453 {0/4:6} B:0 2.75161 [ 2.50214] ((6 . 7) (9 . 8) (11 . 9) (13 . 11)) 9.678 {0/0:6} B:0 2.75276 [ 2.50368] ((4 . 5) (6 . 8) (11 . 11) (13 . 12)) 11.084 {0/2:6} B:0 2.75328 [ 2.50437] ((1 . 7) (4 . 8) (6 . 11) (9 . 12)) 11.571 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.3999] [2595, 3300]: Comparing 1isp_A and 1khc_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 12 (7 H + 5 S) secondary structure elements in 1khc_A, of which 9 satisfy the size requirements. NO SIMILARITY! [2595, 3310]: Comparing 1isp_A and 1ki1_B, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 22 (13 H + 9 S) secondary structure elements in 1ki1_B, of which 9 satisfy the size requirements. NO SIMILARITY! [2595, 3322]: Comparing 1isp_A and 1kjq_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 36 (14 H + 22 S) secondary structure elements in 1kjq_A, of which 9 satisfy the size requirements. 2.20002 [ 1.80004] ((1 . 1) (2 . 2) (4 . 3) (5 . 6) (6 . 7)) 2.755 {0/2:10} B:0 2.20007 [ 1.80013] ((1 . 1) (2 . 4) (4 . 5) (5 . 6) (6 . 7)) 3.765 {0/3:10} B:0 2.20007 [ 1.80014] ((1 . 1) (2 . 2) (4 . 5) (5 . 6) (6 . 7)) 3.796 {0/2:10} B:0 2.20010 [ 1.80018] ((4 . 1) (5 . 2) (6 . 3) (7 . 4) (9 . 5)) 4.066 {0/3:10} B:0 2.20032 [ 1.80058] ((6 . 1) (7 . 2) (9 . 3) (11 . 5) (14 . 8)) 5.460 {0/1:10} B:0 SIMILARITY (1/min{score1}): 0.6836 [and 1/min{score2}: 0.7871] [2595, 3334]: Comparing 1isp_A and 1kkh_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 25 (13 H + 12 S) secondary structure elements in 1kkh_A, of which 14 satisfy the size requirements. 2.75042 [ 3.50020] ((2 . 9) (4 . 10) (5 . 11) (7 . 13)) 6.913 {0/4:6} B:0 2.75210 [ 3.50102] ((1 . 5) (2 . 7) (5 . 9) (7 . 11)) 10.342 {0/5:6} B:0 2.75232 [ 3.50113] ((6 . 1) (9 . 5) (13 . 10) (15 . 11)) 10.610 {0/1:6} B:0 2.75240 [ 3.50116] ((4 . 5) (5 . 9) (6 . 10) (13 . 14)) 10.698 {0/4:6} B:0 2.75300 [ 3.50146] ((4 . 5) (5 . 9) (9 . 10) (13 . 14)) 11.315 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.4545 [and 1/min{score2}: 0.3846] [2595, 3339]: Comparing 1isp_A and 1kl1_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 36 (21 H + 15 S) secondary structure elements in 1kl1_A, of which 25 satisfy the size requirements. 1.83365 [ 4.16669] ((2 . 10) (4 . 11) (5 . 16) (6 . 17) (9 . 19) (11 . 21)) 4.753 {0/5:15} B:0 2.20013 [ 5.00001] ((1 . 11) (4 . 15) (5 . 16) (6 . 19) (9 . 21)) 4.332 {0/5:10} B:0 2.20014 [ 5.00001] ((1 . 11) (4 . 17) (5 . 18) (6 . 19) (9 . 21)) 4.420 {0/3:10} B:0 2.20017 [ 5.00001] ((4 . 17) (5 . 18) (6 . 19) (7 . 20) (9 . 21)) 4.636 {0/5:10} B:0 2.20077 [ 5.00007] ((2 . 16) (4 . 17) (5 . 18) (6 . 19) (9 . 21)) 6.800 {0/4:10} B:0 SIMILARITY (1/min{score1}): 0.8169 [and 1/min{score2}: 0.3671] [2595, 3344]: Comparing 1isp_A and 1klf_B, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 27 (2 H + 25 S) secondary structure elements in 1klf_B, of which 8 satisfy the size requirements. 2.75183 [ 2.00474] ((6 . 20) (9 . 21) (11 . 24) (13 . 26)) 9.997 {0/0:6} B:0 5.11081 [ 5.03186] ((1 . 20) (4 . 22) (6 . 26) (9 . 27)) 8.586 {1/2:6} B:0 5.11100 [ 5.03206] ((4 . 18) (9 . 22) (11 . 26) (13 . 27)) 10.477 {1/2:6} B:0 5.11115 [ 5.03222] ((4 . 18) (6 . 21) (9 . 22) (13 . 27)) 11.469 {1/2:6} B:0 3.66672 [ 3.43716] ((1 . 19) (4 . 26) (6 . 18) (9 . 27)) 9.330 {1/3:6} B:1 SIMILARITY (1/min{score1}): 0.3634 [and 1/min{score2}: 0.4988] [2595, 3358]: Comparing 1isp_A and 1kmv_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 16 (5 H + 11 S) secondary structure elements in 1kmv_A, of which 13 satisfy the size requirements. 2.20015 [ 2.60009] ((1 . 4) (4 . 8) (5 . 9) (6 . 10) (7 . 11)) 4.497 {0/5:10} B:0 2.20024 [ 2.60014] ((4 . 7) (5 . 9) (6 . 10) (7 . 11) (9 . 12)) 5.063 {0/6:10} B:0 2.75007 [ 3.25004] ((6 . 1) (11 . 4) (13 . 7) (15 . 9)) 4.428 {0/1:6} B:0 2.75011 [ 3.25007] ((4 . 1) (5 . 3) (9 . 4) (14 . 11)) 4.977 {0/3:6} B:0 2.75034 [ 3.25021] ((2 . 3) (4 . 4) (9 . 10) (11 . 12)) 6.564 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.8537 [and 1/min{score2}: 0.7434] [2595, 3362]: Comparing 1isp_A and 1kng_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 13 (6 H + 7 S) secondary structure elements in 1kng_A, of which 11 satisfy the size requirements. 2.20182 [ 2.20182] ((6 . 4) (7 . 5) (9 . 6) (11 . 8) (15 . 13)) 8.439 {0/0:10} B:0 2.20221 [ 2.20221] ((2 . 5) (4 . 6) (5 . 7) (6 . 8) (9 . 11)) 8.867 {0/5:10} B:0 2.20336 [ 2.20336] ((6 . 4) (7 . 5) (9 . 6) (11 . 8) (15 . 12)) 9.848 {0/0:10} B:0 2.75002 [ 2.75002] ((1 . 4) (2 . 5) (4 . 6) (9 . 11)) 3.327 {0/3:6} B:0 2.75010 [ 2.75010] ((1 . 4) (2 . 5) (4 . 8) (6 . 11)) 4.881 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.5450 [and 1/min{score2}: 0.5450] [2595, 3366]: Comparing 1isp_A and 1knw_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 33 (14 H + 19 S) secondary structure elements in 1knw_A, of which 13 satisfy the size requirements. 3.66623 [ 3.91549] ((4 . 22) (6 . 26) (9 . 27) (11 . 28)) 5.935 {1/3:6} B:0 3.67149 [ 3.91982] ((4 . 22) (6 . 26) (11 . 28) (15 . 33)) 16.229 {1/3:6} B:0 5.11130 [ 5.21019] ((4 . 22) (5 . 25) (6 . 26) (15 . 33)) 12.241 {2/4:6} B:0 5.02254 [ 5.04360] ((1 . 22) (4 . 2) (6 . 29) (9 . 26) (11 . 27) (13 . 28)) 7.570 {4/8:15} B:2 SIMILARITY (1/min{score1}): 0.2728 [and 1/min{score2}: 0.2554] [2595, 3391]: Comparing 1isp_A and 1kpg_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 21 (14 H + 7 S) secondary structure elements in 1kpg_A, of which 19 satisfy the size requirements. 1.83371 [ 3.16674] ((1 . 4) (2 . 5) (4 . 8) (6 . 10) (9 . 13) (13 . 17)) 4.981 {0/8:15} B:0 2.20007 [ 3.80001] ((1 . 4) (2 . 5) (4 . 6) (9 . 10) (11 . 13)) 3.722 {0/4:10} B:0 2.20017 [ 3.80003] ((5 . 3) (6 . 4) (7 . 5) (9 . 6) (11 . 8)) 4.643 {0/4:10} B:0 2.20036 [ 3.80007] ((5 . 3) (6 . 4) (9 . 6) (11 . 8) (15 . 12)) 5.638 {0/4:10} B:0 2.20057 [ 3.80011] ((2 . 3) (6 . 6) (7 . 7) (9 . 8) (11 . 10)) 6.323 {0/4:10} B:0 SIMILARITY (1/min{score1}): 0.8158 [and 1/min{score2}: 0.4909] [2595, 3410]: Comparing 1isp_A and 1krh_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 30 (11 H + 19 S) secondary structure elements in 1krh_A, of which 9 satisfy the size requirements. 2.20037 [ 1.80068] ((6 . 19) (7 . 20) (9 . 21) (11 . 24) (15 . 27)) 5.670 {0/1:10} B:0 2.29194 [ 1.95694] ((2 . 20) (4 . 24) (6 . 28) (7 . 29) (9 . 30)) 3.860 {1/7:10} B:0 2.50584 [ 2.26889] ((1 . 21) (4 . 24) (6 . 28) (7 . 29) (9 . 30)) 3.746 {1/5:10} B:0 2.50584 [ 2.26889] ((1 . 19) (2 . 20) (4 . 24) (6 . 28) (9 . 30)) 3.758 {1/5:10} B:0 2.75017 [ 2.25031] ((2 . 20) (6 . 24) (11 . 28) (13 . 30)) 5.514 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.6363 [and 1/min{score2}: 0.7776] [2595, 3415]: Comparing 1isp_A and 1ks9_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 24 (13 H + 11 S) secondary structure elements in 1ks9_A, of which 7 satisfy the size requirements. NO SIMILARITY! [2595, 3418]: Comparing 1isp_A and 1ksi_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 51 (14 H + 37 S) secondary structure elements in 1ksi_A, of which 6 satisfy the size requirements. 3.66636 [ 3.36728] ((5 . 1) (6 . 2) (9 . 5) (11 . 6)) 7.350 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.2728 [and 1/min{score2}: 0.2970] [2595, 3446]: Comparing 1isp_A and 1kv6_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 13 (11 H + 2 S) secondary structure elements in 1kv6_A, of which 13 satisfy the size requirements. 4.20766 [ 4.37934] ((2 . 3) (5 . 7) (7 . 8) (15 . 13)) 11.356 {2/5:6} B:0 6.06531 [ 6.12533] ((2 . 1) (5 . 2) (7 . 4) (15 . 10)) 10.121 {3/5:6} B:0 8.02815 [ 8.05429] ((2 . 2) (5 . 3) (7 . 4) (15 . 10)) 14.961 {4/5:6} B:0 7.53379 [ 7.56539] ((2 . 1) (5 . 8) (7 . 11) (15 . 2)) 10.987 {3/4:6} B:1 3.85695 [ 3.95053] ((2 . 13) (5 . 7) (7 . 8) (14 . 2) (15 . 3)) 9.365 {3/8:10} B:2 SIMILARITY (1/min{score1}): 0.2593 [and 1/min{score2}: 0.2531] [2595, 3470]: Comparing 1isp_A and 1kxp_D, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 21 (21 H + 0 S) secondary structure elements in 1kxp_D, of which 10 satisfy the size requirements. NO SIMILARITY! [2595, 3472]: Comparing 1isp_A and 1kxv_C, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 12 (2 H + 10 S) secondary structure elements in 1kxv_C, of which 10 satisfy the size requirements. 2.75064 [ 2.50085] ((4 . 4) (6 . 9) (9 . 11) (11 . 12)) 7.690 {0/2:6} B:0 2.75226 [ 2.50301] ((4 . 3) (6 . 8) (9 . 11) (11 . 12)) 10.538 {0/1:6} B:0 3.66679 [ 3.57119] ((4 . 1) (6 . 4) (11 . 11) (13 . 12)) 9.594 {1/3:6} B:0 5.11070 [ 5.07640] ((1 . 1) (6 . 3) (9 . 11) (11 . 4)) 6.268 {1/2:6} B:1 5.02248 [ 5.01539] ((1 . 4) (4 . 6) (6 . 11) (9 . 3) (11 . 12) (13 . 2)) 5.746 {4/8:15} B:2 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.3999] [2595, 3481]: Comparing 1isp_A and 1kyq_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 22 (12 H + 10 S) secondary structure elements in 1kyq_A, of which 10 satisfy the size requirements. 2.20003 [ 2.00004] ((1 . 2) (2 . 3) (6 . 10) (7 . 11) (9 . 12)) 2.947 {0/2:10} B:0 2.20005 [ 2.00007] ((1 . 2) (4 . 4) (6 . 10) (7 . 11) (9 . 12)) 3.419 {0/0:10} B:0 2.20046 [ 2.00061] ((1 . 2) (4 . 4) (6 . 8) (9 . 10) (11 . 12)) 5.989 {0/0:10} B:0 2.75002 [ 2.50002] ((4 . 8) (6 . 10) (7 . 11) (9 . 12)) 3.057 {0/3:6} B:0 2.75004 [ 2.50005] ((1 . 4) (6 . 10) (7 . 11) (9 . 12)) 3.827 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.6363 [and 1/min{score2}: 0.6999] [2595, 3489]: Comparing 1isp_A and 1kzq_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 26 (6 H + 20 S) secondary structure elements in 1kzq_A, of which 7 satisfy the size requirements. 2.75144 [ 1.75555] ((1 . 1) (4 . 4) (9 . 10) (11 . 14)) 9.409 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.3634 [and 1/min{score2}: 0.5696] [2595, 3495]: Comparing 1isp_A and 1l0l_B, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 30 (19 H + 11 S) secondary structure elements in 1l0l_B, of which 14 satisfy the size requirements. 2.75012 [ 3.50006] ((6 . 2) (9 . 3) (13 . 8) (15 . 9)) 5.051 {0/1:6} B:0 2.75078 [ 3.50038] ((6 . 2) (9 . 3) (11 . 7) (13 . 8)) 8.079 {0/1:6} B:0 2.75215 [ 3.50105] ((6 . 2) (7 . 5) (11 . 7) (13 . 8)) 10.412 {0/2:6} B:0 2.75393 [ 3.50191] ((6 . 3) (7 . 5) (9 . 7) (15 . 11)) 12.107 {0/0:6} B:0 2.75581 [ 3.50282] ((6 . 3) (7 . 5) (11 . 7) (15 . 10)) 13.350 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.2857] [2595, 3496]: Comparing 1isp_A and 1l0l_B, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 30 (19 H + 11 S) secondary structure elements in 1l0l_B, of which 12 satisfy the size requirements. 2.75070 [ 3.00054] ((6 . 18) (11 . 22) (13 . 23) (15 . 24)) 7.847 {0/0:6} B:0 2.75129 [ 3.00100] ((1 . 18) (4 . 19) (5 . 21) (6 . 22)) 9.165 {0/2:6} B:0 2.75189 [ 3.00145] ((1 . 18) (4 . 19) (6 . 22) (9 . 23)) 10.075 {0/1:6} B:0 2.92670 [ 3.13972] ((1 . 19) (2 . 20) (5 . 21) (15 . 28)) 10.380 {1/5:6} B:0 3.13300 [ 3.31083] ((2 . 20) (5 . 21) (6 . 22) (15 . 28)) 8.861 {1/4:6} B:0 SIMILARITY (1/min{score1}): 0.3635 [and 1/min{score2}: 0.3333] [2595, 3533]: Comparing 1isp_A and 1l4d_B, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 11 (1 H + 10 S) secondary structure elements in 1l4d_B, of which 8 satisfy the size requirements. 2.75089 [ 2.00231] ((4 . 3) (5 . 6) (6 . 7) (9 . 8)) 8.347 {0/3:6} B:0 2.75116 [ 2.00302] ((4 . 3) (5 . 6) (6 . 7) (9 . 10)) 8.923 {0/3:6} B:0 3.66647 [ 3.43686] ((9 . 1) (11 . 3) (13 . 5) (14 . 6)) 8.122 {1/3:6} B:0 3.66666 [ 3.43709] ((1 . 3) (2 . 6) (4 . 7) (6 . 10)) 9.079 {1/3:6} B:0 6.71448 [ 6.68020] ((1 . 3) (2 . 6) (4 . 7) (6 . 11)) 8.711 {2/3:6} B:0 SIMILARITY (1/min{score1}): 0.3635 [and 1/min{score2}: 0.4994] [2595, 3537]: Comparing 1isp_A and 1l5a_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 28 (15 H + 13 S) secondary structure elements in 1l5a_A, of which 11 satisfy the size requirements. 2.75007 [ 2.75007] ((2 . 3) (4 . 7) (5 . 8) (6 . 9)) 4.430 {0/0:6} B:0 2.75013 [ 2.75013] ((1 . 2) (2 . 3) (4 . 7) (5 . 8)) 5.201 {0/0:6} B:0 2.75016 [ 2.75016] ((6 . 2) (7 . 3) (11 . 7) (13 . 9)) 5.463 {0/0:6} B:0 2.75027 [ 2.75027] ((6 . 7) (7 . 8) (9 . 9) (11 . 10)) 6.209 {0/0:6} B:0 2.75041 [ 2.75041] ((4 . 2) (5 . 3) (9 . 7) (11 . 9)) 6.861 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.5453 [and 1/min{score2}: 0.5453] [2595, 3538]: Comparing 1isp_A and 1l5a_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 28 (15 H + 13 S) secondary structure elements in 1l5a_A, of which 14 satisfy the size requirements. 2.76090 [ 3.50531] ((2 . 13) (4 . 15) (7 . 17) (13 . 23)) 15.637 {0/3:6} B:0 3.13338 [ 3.70909] ((4 . 15) (7 . 17) (9 . 18) (14 . 22)) 9.797 {1/4:6} B:0 3.66651 [ 4.06702] ((1 . 18) (9 . 23) (11 . 25) (15 . 27)) 8.371 {1/3:6} B:0 4.20705 [ 4.48919] ((2 . 13) (11 . 20) (14 . 21) (15 . 22)) 8.330 {2/5:6} B:0 10.01428 [10.03732] ((1 . 18) (4 . 20) (5 . 21) (6 . 23)) 6.977 {2/2:6} B:0 SIMILARITY (1/min{score1}): 0.3632 [and 1/min{score2}: 0.2856] [2595, 3548]: Comparing 1isp_A and 1l6m_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 13 (4 H + 9 S) secondary structure elements in 1l6m_A, of which 10 satisfy the size requirements. 2.75039 [ 2.50052] ((4 . 5) (5 . 7) (6 . 8) (9 . 10)) 6.791 {0/4:6} B:0 2.75049 [ 2.50065] ((1 . 3) (4 . 5) (5 . 7) (9 . 10)) 7.185 {0/3:6} B:0 2.75057 [ 2.50075] ((4 . 3) (6 . 5) (7 . 7) (11 . 10)) 7.450 {0/4:6} B:0 2.75081 [ 2.50108] ((6 . 5) (7 . 7) (9 . 8) (11 . 10)) 8.162 {0/1:6} B:0 2.75283 [ 2.50376] ((9 . 5) (11 . 8) (13 . 10) (15 . 11)) 11.149 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.3999] [2595, 3549]: Comparing 1isp_A and 1l6o_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 8 (2 H + 6 S) secondary structure elements in 1l6o_A, of which 7 satisfy the size requirements. 6.71445 [ 6.67461] ((4 . 1) (6 . 5) (7 . 7) (9 . 8)) 7.705 {2/3:6} B:0 6.71451 [ 6.67467] ((4 . 1) (6 . 5) (7 . 7) (11 . 8)) 9.541 {2/3:6} B:0 6.71452 [ 6.67468] ((11 . 2) (13 . 3) (14 . 4) (15 . 7)) 9.807 {2/3:6} B:0 SIMILARITY (1/min{score1}): 0.1489 [and 1/min{score2}: 0.1498] [2595, 3561]: Comparing 1isp_A and 1l7d_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 38 (19 H + 19 S) secondary structure elements in 1l7d_A, of which 15 satisfy the size requirements. 2.20073 [ 3.00029] ((2 . 17) (4 . 20) (6 . 22) (9 . 26) (11 . 28)) 6.720 {0/1:10} B:0 2.20119 [ 3.00047] ((2 . 25) (4 . 26) (5 . 27) (6 . 28) (9 . 31)) 7.588 {0/5:10} B:0 2.20202 [ 3.00080] ((5 . 17) (7 . 21) (9 . 22) (13 . 26) (15 . 27)) 8.665 {0/3:10} B:0 2.44457 [ 2.82263] ((4 . 22) (5 . 23) (9 . 26) (11 . 28) (13 . 31) (14 . 32)) 6.554 {2/9:15} B:0 2.75009 [ 3.75003] ((5 . 17) (6 . 20) (7 . 21) (9 . 22)) 4.664 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.8175 [and 1/min{score2}: 0.5999] [2595, 3570]: Comparing 1isp_A and 1l8n_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 40 (22 H + 18 S) secondary structure elements in 1l8n_A, of which 9 satisfy the size requirements. 2.20003 [ 1.80005] ((1 . 1) (2 . 2) (6 . 4) (9 . 8) (11 . 10)) 2.974 {0/3:10} B:0 2.20003 [ 1.80005] ((1 . 1) (2 . 2) (4 . 3) (9 . 8) (11 . 10)) 2.975 {0/5:10} B:0 2.20018 [ 1.80034] ((1 . 1) (2 . 2) (4 . 4) (6 . 8) (9 . 10)) 4.766 {0/4:10} B:0 2.20020 [ 1.80036] ((6 . 1) (9 . 3) (11 . 4) (13 . 8) (15 . 9)) 4.849 {0/0:10} B:0 2.75026 [ 2.25047] ((9 . 1) (11 . 3) (13 . 4) (15 . 9)) 6.114 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.5453 [and 1/min{score2}: 0.6663] [2595, 3585]: Comparing 1isp_A and 1lar_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 39 (17 H + 22 S) secondary structure elements in 1lar_A, of which 17 satisfy the size requirements. 2.20463 [ 3.40126] ((1 . 6) (2 . 7) (9 . 14) (11 . 16) (14 . 17)) 10.673 {0/6:10} B:0 2.50671 [ 3.49784] ((1 . 12) (4 . 14) (5 . 15) (6 . 16) (7 . 17)) 7.854 {1/5:10} B:0 2.75011 [ 4.25003] ((4 . 6) (5 . 7) (6 . 8) (11 . 14)) 4.956 {0/4:6} B:0 2.75014 [ 4.25004] ((1 . 8) (4 . 12) (6 . 14) (9 . 16)) 5.210 {0/2:6} B:0 2.75031 [ 4.25009] ((5 . 7) (6 . 8) (9 . 12) (11 . 14)) 6.437 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.4838 [and 1/min{score2}: 0.4318] [2595, 3613]: Comparing 1isp_A and 1lf6_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 45 (22 H + 23 S) secondary structure elements in 1lf6_A, of which 18 satisfy the size requirements. 2.75415 [ 4.50095] ((5 . 30) (7 . 31) (13 . 35) (15 . 38)) 12.271 {0/3:6} B:0 2.92775 [ 4.54402] ((2 . 27) (5 . 30) (7 . 31) (15 . 38)) 11.671 {1/5:6} B:0 SIMILARITY (1/min{score1}): 0.3631 [and 1/min{score2}: 0.2222] [2595, 3625]: Comparing 1isp_A and 1lgp_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 9 (1 H + 8 S) secondary structure elements in 1lgp_A, of which 7 satisfy the size requirements. NO SIMILARITY! [2595, 3626]: Comparing 1isp_A and 1lgr, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 36 (18 H + 18 S) secondary structure elements in 1lgr, of which 7 satisfy the size requirements. 2.75025 [ 1.75096] ((1 . 2) (2 . 5) (4 . 6) (6 . 11)) 6.056 {0/2:6} B:0 3.66678 [ 3.39573] ((1 . 2) (4 . 3) (5 . 5) (9 . 11)) 9.570 {1/3:6} B:0 4.32124 [ 4.29168] ((1 . 3) (2 . 5) (4 . 6) (6 . 2) (9 . 11) (15 . 1)) 6.612 {3/7:15} B:2 3.40728 [ 3.34596] ((2 . 5) (4 . 6) (6 . 3) (9 . 2) (11 . 11) (15 . 1)) 6.586 {2/6:15} B:3 2.08907 [ 1.76031] ((1 . 6) (2 . 5) (6 . 3) (9 . 2) (11 . 11) (15 . 1)) 6.829 {1/6:15} B:4 SIMILARITY (1/min{score1}): 0.4787 [and 1/min{score2}: 0.5711] [2595, 3628]: Comparing 1isp_A and 1lh0_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 16 (8 H + 8 S) secondary structure elements in 1lh0_A, of which 15 satisfy the size requirements. 1.83347 [ 2.50005] ((1 . 6) (2 . 7) (4 . 8) (6 . 10) (7 . 11) (9 . 12)) 3.846 {0/9:15} B:0 2.20016 [ 3.00006] ((2 . 7) (6 . 10) (7 . 11) (9 . 12) (11 . 14)) 4.583 {0/4:10} B:0 2.20016 [ 3.00006] ((4 . 10) (5 . 11) (6 . 12) (7 . 13) (9 . 14)) 4.598 {0/2:10} B:0 2.20020 [ 3.00008] ((2 . 5) (6 . 10) (7 . 11) (9 . 12) (11 . 14)) 4.890 {0/4:10} B:0 2.20070 [ 3.00028] ((2 . 5) (5 . 7) (9 . 10) (11 . 12) (13 . 14)) 6.652 {0/7:10} B:0 SIMILARITY (1/min{score1}): 0.8176 [and 1/min{score2}: 0.5999] [2595, 3651]: Comparing 1isp_A and 1ll2_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 26 (14 H + 12 S) secondary structure elements in 1ll2_A, of which 19 satisfy the size requirements. 1.83406 [ 3.16681] ((1 . 1) (2 . 2) (4 . 3) (6 . 5) (9 . 8) (11 . 11)) 5.845 {0/6:15} B:0 1.83485 [ 3.16696] ((1 . 1) (2 . 2) (4 . 3) (5 . 4) (9 . 8) (11 . 11)) 7.035 {0/8:15} B:0 2.20014 [ 3.80003] ((4 . 1) (5 . 2) (6 . 3) (7 . 4) (9 . 5)) 4.462 {0/1:10} B:0 2.20091 [ 3.80018] ((1 . 1) (2 . 2) (5 . 4) (6 . 5) (9 . 8)) 7.096 {0/4:10} B:0 2.75006 [ 4.75001] ((1 . 1) (2 . 2) (4 . 3) (7 . 7)) 4.301 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.6362 [and 1/min{score2}: 0.4171] [2595, 3656]: Comparing 1isp_A and 1lld_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 25 (11 H + 14 S) secondary structure elements in 1lld_A, of which 7 satisfy the size requirements. 7.53385 [ 7.50574] ((2 . 12) (5 . 20) (9 . 22) (14 . 25)) 11.943 {3/4:6} B:0 SIMILARITY (1/min{score1}): 0.1327 [and 1/min{score2}: 0.1332] [2595, 3658]: Comparing 1isp_A and 1lln_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 19 (10 H + 9 S) secondary structure elements in 1lln_A, of which 18 satisfy the size requirements. 2.20042 [ 3.60010] ((6 . 1) (7 . 2) (9 . 5) (11 . 6) (13 . 7)) 5.861 {0/1:10} B:0 2.75008 [ 4.50002] ((4 . 1) (5 . 2) (6 . 5) (9 . 7)) 4.584 {0/2:6} B:0 2.75010 [ 4.50002] ((6 . 1) (7 . 2) (11 . 5) (13 . 7)) 4.781 {0/1:6} B:0 2.75067 [ 4.50015] ((1 . 1) (6 . 7) (14 . 12) (15 . 13)) 7.788 {0/3:6} B:0 2.75132 [ 4.50030] ((1 . 5) (4 . 7) (14 . 15) (15 . 16)) 9.211 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.4545 [and 1/min{score2}: 0.2778] [2595, 3659]: Comparing 1isp_A and 1lm4_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 16 (7 H + 9 S) secondary structure elements in 1lm4_A, of which 11 satisfy the size requirements. 2.75072 [ 2.75072] ((2 . 3) (4 . 5) (6 . 8) (11 . 13)) 7.909 {0/2:6} B:0 5.11069 [ 5.11069] ((5 . 3) (6 . 5) (9 . 8) (15 . 14)) 5.728 {1/2:6} B:0 5.11071 [ 5.11071] ((5 . 3) (7 . 4) (9 . 7) (15 . 14)) 6.727 {1/2:6} B:0 4.08877 [ 4.08877] ((1 . 7) (2 . 3) (6 . 8) (11 . 12) (13 . 13)) 8.114 {2/5:10} B:1 2.28628 [ 2.28628] ((4 . 8) (5 . 3) (6 . 7) (7 . 4) (9 . 5) (15 . 14)) 6.377 {1/5:15} B:2 SIMILARITY (1/min{score1}): 0.4374 [and 1/min{score2}: 0.4374] [2595, 3661]: Comparing 1isp_A and 1lm7_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 26 (13 H + 13 S) secondary structure elements in 1lm7_A, of which 20 satisfy the size requirements. 2.75033 [ 5.00005] ((1 . 8) (4 . 12) (13 . 24) (14 . 25)) 6.504 {0/3:6} B:0 2.92589 [ 5.03189] ((2 . 6) (7 . 13) (14 . 22) (15 . 25)) 8.925 {1/5:6} B:0 3.13700 [ 5.07748] ((2 . 17) (5 . 18) (7 . 22) (11 . 26)) 14.002 {1/4:6} B:0 3.66642 [ 5.23058] ((2 . 6) (5 . 10) (6 . 11) (7 . 13)) 7.805 {2/6:6} B:0 3.66677 [ 5.23070] ((1 . 11) (5 . 14) (7 . 18) (11 . 23)) 9.508 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.3857 [and 1/min{score2}: 0.3119] [2595, 3663]: Comparing 1isp_A and 1lm8_C, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 7 (4 H + 3 S) secondary structure elements in 1lm8_C, of which 7 satisfy the size requirements. 2.75136 [ 1.75527] ((9 . 1) (11 . 5) (14 . 6) (15 . 7)) 9.286 {0/3:6} B:0 2.75148 [ 1.75573] ((9 . 1) (13 . 5) (14 . 6) (15 . 7)) 9.485 {0/3:6} B:0 2.75169 [ 1.75654] ((9 . 2) (11 . 5) (14 . 6) (15 . 7)) 9.805 {0/2:6} B:0 3.13251 [ 2.63864] ((4 . 1) (5 . 4) (6 . 5) (7 . 6)) 6.871 {1/4:6} B:0 3.66669 [ 3.39562] ((11 . 1) (13 . 2) (14 . 4) (15 . 6)) 9.219 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.5708] [2595, 3688]: Comparing 1isp_A and 1lp3_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 43 (7 H + 36 S) secondary structure elements in 1lp3_A, of which 32 satisfy the size requirements. 2.75070 [ 8.00003] ((4 . 29) (7 . 33) (11 . 37) (13 . 38)) 7.857 {0/1:6} B:0 3.13435 [ 8.01913] ((1 . 5) (4 . 8) (9 . 14) (11 . 16)) 11.425 {1/4:6} B:0 3.13919 [ 8.01942] ((1 . 11) (2 . 10) (4 . 12) (9 . 17)) 15.395 {1/4:6} B:1 3.67181 [ 8.06015] ((1 . 5) (4 . 11) (5 . 10) (11 . 16)) 16.461 {1/3:6} B:1 SIMILARITY (1/min{score1}): 0.3635 [and 1/min{score2}: 0.1250] [2595, 3697]: Comparing 1isp_A and 1lql_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 10 (4 H + 6 S) secondary structure elements in 1lql_A, of which 9 satisfy the size requirements. 2.75068 [ 2.25125] ((1 . 6) (4 . 7) (5 . 8) (6 . 10)) 7.815 {0/1:6} B:0 2.75188 [ 2.25342] ((1 . 7) (2 . 8) (4 . 10) (5 . 9)) 10.060 {0/2:6} B:1 3.13446 [ 2.83902] ((4 . 7) (5 . 8) (6 . 10) (7 . 9)) 11.565 {1/4:6} B:1 3.13460 [ 2.83922] ((4 . 1) (6 . 4) (14 . 9) (15 . 8)) 11.752 {1/4:6} B:1 SIMILARITY (1/min{score1}): 0.3635 [and 1/min{score2}: 0.4442] [2595, 3703]: Comparing 1isp_A and 1lqv_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 12 (4 H + 8 S) secondary structure elements in 1lqv_A, of which 12 satisfy the size requirements. 2.75204 [ 3.00157] ((1 . 1) (4 . 3) (11 . 9) (15 . 12)) 10.268 {0/4:6} B:0 2.75244 [ 3.00188] ((9 . 1) (11 . 3) (13 . 4) (15 . 5)) 10.745 {0/0:6} B:0 2.75249 [ 3.00192] ((1 . 4) (2 . 5) (4 . 6) (6 . 8)) 10.800 {0/3:6} B:0 3.13660 [ 3.31388] ((2 . 5) (4 . 7) (5 . 10) (7 . 11)) 13.699 {1/4:6} B:0 5.11107 [ 5.15507] ((1 . 1) (4 . 3) (7 . 5) (15 . 12)) 10.951 {2/4:6} B:0 SIMILARITY (1/min{score1}): 0.3635 [and 1/min{score2}: 0.3332] [2595, 3732]: Comparing 1isp_A and 1lu4_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 13 (6 H + 7 S) secondary structure elements in 1lu4_A, of which 12 satisfy the size requirements. 1.83341 [ 2.00006] ((1 . 5) (2 . 6) (4 . 7) (6 . 11) (9 . 12) (15 . 13)) 3.374 {0/5:15} B:0 2.20173 [ 2.40133] ((1 . 7) (2 . 8) (4 . 9) (6 . 12) (7 . 13)) 8.337 {0/6:10} B:0 2.20263 [ 2.40203] ((6 . 5) (7 . 6) (9 . 7) (11 . 9) (15 . 13)) 9.260 {0/0:10} B:0 2.50583 [ 2.64818] ((4 . 5) (5 . 6) (6 . 7) (7 . 8) (9 . 9)) 3.501 {1/5:10} B:0 2.75017 [ 3.00013] ((7 . 4) (9 . 5) (11 . 7) (14 . 8)) 5.536 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.5849 [and 1/min{score2}: 0.5481] [2595, 3733]: Comparing 1isp_A and 1lu9_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 23 (11 H + 12 S) secondary structure elements in 1lu9_A, of which 9 satisfy the size requirements. 1.57149 [ 1.28583] ((1 . 1) (2 . 2) (4 . 3) (5 . 4) (6 . 6) (7 . 7) (9 . 8)) 2.835 {0/10:21} B:0 2.75008 [ 2.25015] ((6 . 1) (9 . 3) (11 . 6) (13 . 8)) 4.572 {0/1:6} B:0 2.75017 [ 2.25032] ((1 . 1) (2 . 2) (5 . 7) (6 . 8)) 5.556 {0/2:6} B:0 2.75062 [ 2.25114] ((1 . 6) (2 . 7) (4 . 8) (5 . 9)) 7.638 {0/1:6} B:0 2.75090 [ 2.25164] ((1 . 3) (4 . 6) (5 . 7) (7 . 9)) 8.362 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.6363 [and 1/min{score2}: 0.7777] [2595, 3740]: Comparing 1isp_A and 1luq_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 9 (1 H + 8 S) secondary structure elements in 1luq_A, of which 9 satisfy the size requirements. 2.75028 [ 2.25052] ((1 . 2) (4 . 4) (6 . 6) (9 . 9)) 6.268 {0/3:6} B:0 2.75030 [ 2.25055] ((4 . 2) (6 . 4) (9 . 6) (11 . 9)) 6.359 {0/3:6} B:0 2.75042 [ 2.25076] ((4 . 1) (6 . 3) (9 . 5) (11 . 7)) 6.905 {0/3:6} B:0 2.75269 [ 2.25490] ((1 . 4) (4 . 6) (5 . 8) (6 . 9)) 11.005 {0/2:6} B:0 3.66649 [ 3.49470] ((1 . 1) (4 . 4) (6 . 6) (11 . 9)) 8.232 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.4443] [2595, 3741]: Comparing 1isp_A and 1lur_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 35 (6 H + 29 S) secondary structure elements in 1lur_A, of which 21 satisfy the size requirements. 2.75044 [ 5.25006] ((4 . 23) (6 . 25) (9 . 27) (11 . 32)) 7.003 {0/3:6} B:0 2.75061 [ 5.25009] ((1 . 2) (5 . 5) (9 . 13) (11 . 16)) 7.607 {0/2:6} B:0 2.75102 [ 5.25015] ((1 . 1) (4 . 3) (11 . 14) (13 . 16)) 8.637 {0/2:6} B:0 2.75113 [ 5.25016] ((4 . 2) (5 . 5) (11 . 13) (13 . 16)) 8.856 {0/2:6} B:0 2.75364 [ 5.25052] ((4 . 2) (6 . 4) (11 . 13) (13 . 16)) 11.874 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.3753 [and 1/min{score2}: 0.2696] [2595, 3776]: Comparing 1isp_A and 1m0w_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 43 (20 H + 23 S) secondary structure elements in 1m0w_A, of which 10 satisfy the size requirements. 1.79018 [ 1.69925] ((1 . 15) (2 . 16) (4 . 17) (5 . 18) (6 . 21) (7 . 23) (9 . 24)) 4.711 {1/7:21} B:0 1.83346 [ 1.66683] ((1 . 15) (2 . 16) (4 . 17) (5 . 18) (6 . 21) (9 . 24)) 3.759 {0/5:15} B:0 1.83347 [ 1.66685] ((1 . 15) (2 . 16) (4 . 17) (6 . 21) (7 . 23) (9 . 24)) 3.869 {0/5:15} B:0 2.20009 [ 2.00011] ((1 . 15) (2 . 16) (4 . 17) (5 . 18) (9 . 24)) 3.929 {0/4:10} B:0 2.50692 [ 2.37973] ((4 . 15) (5 . 16) (7 . 18) (9 . 21) (11 . 24)) 8.259 {1/5:10} B:0 SIMILARITY (1/min{score1}): 0.5586 [and 1/min{score2}: 0.6000] [2595, 3778]: Comparing 1isp_A and 1m14_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 25 (14 H + 11 S) secondary structure elements in 1m14_A, of which 15 satisfy the size requirements. 2.75025 [ 3.75010] ((1 . 4) (2 . 5) (4 . 6) (11 . 13)) 6.050 {0/3:6} B:0 2.75226 [ 3.75089] ((9 . 2) (11 . 4) (14 . 5) (15 . 8)) 10.545 {0/3:6} B:0 2.75298 [ 3.75118] ((1 . 4) (2 . 5) (4 . 6) (5 . 8)) 11.293 {0/2:6} B:0 3.13228 [ 3.92288] ((4 . 2) (6 . 4) (7 . 5) (9 . 6)) 4.386 {1/4:6} B:0 3.66636 [ 4.23363] ((1 . 4) (2 . 5) (4 . 7) (9 . 12)) 7.337 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.2667] [2595, 3787]: Comparing 1isp_A and 1m1n_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 38 (24 H + 14 S) secondary structure elements in 1m1n_A, of which 34 satisfy the size requirements. 1.57160 [ 4.85715] ((1 . 27) (2 . 28) (4 . 29) (5 . 32) (6 . 33) (7 . 34) (9 . 35)) 3.630 {0/9:21} B:0 1.99809 [ 4.28971] ((1 . 17) (2 . 18) (4 . 19) (5 . 20) (6 . 21) (7 . 22) (9 . 23) (15 . 24)) 4.229 {3/16:28} B:0 2.20056 [ 6.80002] ((1 . 27) (2 . 28) (4 . 29) (6 . 31) (9 . 35)) 6.294 {0/4:10} B:0 2.20061 [ 6.80002] ((1 . 17) (2 . 18) (4 . 19) (5 . 22) (7 . 24)) 6.430 {0/4:10} B:0 2.20147 [ 6.80005] ((4 . 17) (5 . 18) (6 . 21) (7 . 22) (9 . 23)) 8.006 {0/5:10} B:0 SIMILARITY (1/min{score1}): 0.8158 [and 1/min{score2}: 0.3214] [2595, 3790]: Comparing 1isp_A and 1m1x_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 74 (6 H + 68 S) secondary structure elements in 1m1x_A, of which 32 satisfy the size requirements. 2.20172 [ 6.40007] ((2 . 17) (4 . 18) (6 . 21) (9 . 24) (11 . 26)) 8.330 {0/6:10} B:0 2.75004 [ 8.00000] ((1 . 9) (4 . 13) (6 . 15) (11 . 21)) 3.843 {0/2:6} B:0 2.75009 [ 8.00000] ((1 . 9) (4 . 13) (6 . 15) (9 . 18)) 4.703 {0/2:6} B:0 2.75009 [ 8.00000] ((4 . 25) (6 . 27) (9 . 31) (11 . 33)) 4.749 {0/3:6} B:0 2.75010 [ 8.00000] ((1 . 2) (4 . 4) (6 . 9) (9 . 13)) 4.857 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.4542 [and 1/min{score2}: 0.2055] [2595, 3807]: Comparing 1isp_A and 1m2o_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 52 (25 H + 27 S) secondary structure elements in 1m2o_A, of which 8 satisfy the size requirements. 2.75009 [ 2.00022] ((4 . 43) (6 . 47) (7 . 49) (9 . 50)) 4.659 {0/2:6} B:0 2.75018 [ 2.00048] ((1 . 43) (4 . 47) (5 . 49) (6 . 50)) 5.624 {0/0:6} B:0 2.75020 [ 2.00051] ((1 . 43) (4 . 47) (5 . 49) (9 . 50)) 5.727 {0/1:6} B:0 3.48138 [ 3.37679] ((1 . 43) (6 . 46) (11 . 47) (13 . 50) (15 . 51)) 5.248 {1/3:10} B:0 3.66780 [ 3.43847] ((4 . 43) (9 . 47) (11 . 50) (15 . 52)) 12.106 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.4545 [and 1/min{score2}: 0.6249] [2595, 3810]: Comparing 1isp_A and 1m2t_B, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 36 (11 H + 25 S) secondary structure elements in 1m2t_B, of which 9 satisfy the size requirements. 2.75015 [ 2.25028] ((1 . 8) (6 . 9) (11 . 10) (13 . 16)) 5.355 {0/2:6} B:0 2.75026 [ 2.25048] ((6 . 8) (9 . 10) (11 . 14) (13 . 16)) 6.141 {0/1:6} B:0 3.13285 [ 2.83687] ((4 . 4) (6 . 8) (9 . 11) (13 . 16)) 8.395 {1/4:6} B:0 2.75058 [ 2.25107] ((1 . 9) (6 . 8) (9 . 11) (11 . 14)) 7.514 {0/2:6} B:1 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.4444] [2595, 3817]: Comparing 1isp_A and 1m3k_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 29 (15 H + 14 S) secondary structure elements in 1m3k_A, of which 17 satisfy the size requirements. 1.83347 [ 2.83337] ((1 . 5) (2 . 6) (4 . 7) (5 . 8) (6 . 9) (13 . 15)) 3.839 {0/9:15} B:0 2.20300 [ 3.40081] ((4 . 1) (5 . 3) (9 . 5) (11 . 7) (15 . 12)) 9.573 {0/5:10} B:0 2.29200 [ 3.42623] ((4 . 1) (5 . 3) (6 . 5) (7 . 6) (9 . 7)) 4.523 {1/7:10} B:0 2.36402 [ 3.44860] ((4 . 1) (5 . 3) (6 . 5) (7 . 6) (15 . 12)) 8.776 {1/6:10} B:0 2.75002 [ 4.25000] ((6 . 1) (11 . 5) (13 . 7) (15 . 8)) 3.088 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.5586 [and 1/min{score2}: 0.4071] [2595, 3818]: Comparing 1isp_A and 1m3k_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 29 (15 H + 14 S) secondary structure elements in 1m3k_A, of which 7 satisfy the size requirements. 2.75069 [ 1.75267] ((4 . 20) (5 . 21) (6 . 23) (11 . 28)) 7.831 {0/2:6} B:0 2.75080 [ 1.75309] ((1 . 20) (2 . 21) (5 . 24) (9 . 28)) 8.120 {0/3:6} B:0 2.92500 [ 2.24466] ((4 . 20) (5 . 21) (6 . 23) (7 . 24)) 4.686 {1/5:6} B:0 3.13359 [ 2.64045] ((1 . 20) (2 . 21) (7 . 27) (11 . 29)) 10.225 {1/4:6} B:0 3.66620 [ 3.39500] ((1 . 23) (2 . 24) (5 . 27) (6 . 29)) 5.461 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.6125 [and 1/min{score2}: 0.8558] [2595, 3829]: Comparing 1isp_A and 1m45_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 13 (9 H + 4 S) secondary structure elements in 1m45_A, of which 12 satisfy the size requirements. 2.75374 [ 3.00289] ((2 . 7) (4 . 9) (5 . 10) (7 . 13)) 11.958 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.3631 [and 1/min{score2}: 0.3330] [2595, 3830]: Comparing 1isp_A and 1m48_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 6 (6 H + 0 S) secondary structure elements in 1m48_A, of which 6 satisfy the size requirements. NO SIMILARITY! [2595, 3831]: Comparing 1isp_A and 1m4j_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 11 (6 H + 5 S) secondary structure elements in 1m4j_A, of which 9 satisfy the size requirements. 2.29443 [ 1.96094] ((2 . 1) (4 . 2) (9 . 6) (11 . 9) (14 . 11)) 9.486 {1/7:10} B:0 2.75032 [ 2.25059] ((5 . 1) (11 . 6) (13 . 9) (15 . 11)) 6.466 {0/3:6} B:0 2.75038 [ 2.25069] ((7 . 4) (11 . 6) (13 . 9) (14 . 11)) 6.748 {0/3:6} B:0 2.75056 [ 2.25102] ((5 . 1) (6 . 2) (11 . 6) (15 . 11)) 7.423 {0/2:6} B:0 2.75132 [ 2.25241] ((5 . 1) (6 . 2) (13 . 6) (15 . 11)) 9.217 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.4543 [and 1/min{score2}: 0.5549] [2595, 3834]: Comparing 1isp_A and 1m4r_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 8 (8 H + 0 S) secondary structure elements in 1m4r_A, of which 7 satisfy the size requirements. NO SIMILARITY! [2595, 3847]: Comparing 1isp_A and 1m5y_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 28 (17 H + 11 S) secondary structure elements in 1m5y_A, of which 8 satisfy the size requirements. NO SIMILARITY! [2595, 3849]: Comparing 1isp_A and 1m5z_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 8 (2 H + 6 S) secondary structure elements in 1m5z_A, of which 7 satisfy the size requirements. 6.06516 [ 6.01086] ((4 . 1) (5 . 4) (6 . 5) (7 . 7)) 6.733 {3/5:6} B:0 4.08864 [ 4.01504] ((1 . 8) (4 . 1) (5 . 4) (6 . 5) (9 . 3)) 6.695 {2/5:10} B:2 SIMILARITY (1/min{score1}): 0.2446 [and 1/min{score2}: 0.2491] [2595, 3853]: Comparing 1isp_A and 1m65_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 20 (12 H + 8 S) secondary structure elements in 1m65_A, of which 14 satisfy the size requirements. 1.83429 [ 2.33380] ((4 . 8) (5 . 9) (6 . 12) (7 . 13) (9 . 14) (15 . 19)) 6.270 {0/9:15} B:0 1.83445 [ 2.33388] ((1 . 3) (5 . 4) (6 . 6) (9 . 8) (13 . 12) (15 . 19)) 6.520 {0/6:15} B:0 2.20016 [ 2.80008] ((5 . 2) (6 . 3) (7 . 4) (9 . 6) (11 . 8)) 4.579 {0/4:10} B:0 2.20022 [ 2.80011] ((5 . 2) (6 . 3) (7 . 4) (9 . 6) (13 . 8)) 4.967 {0/5:10} B:0 2.20031 [ 2.80015] ((2 . 2) (4 . 3) (5 . 4) (9 . 8) (13 . 12)) 5.411 {0/6:10} B:0 SIMILARITY (1/min{score1}): 0.7206 [and 1/min{score2}: 0.5694] [2595, 3856]: Comparing 1isp_A and 1m6b_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 48 (10 H + 38 S) secondary structure elements in 1m6b_A, of which 8 satisfy the size requirements. 2.20014 [ 1.60037] ((6 . 3) (7 . 4) (9 . 6) (11 . 9) (13 . 12)) 4.467 {0/0:10} B:0 2.75004 [ 2.00011] ((7 . 4) (9 . 3) (11 . 6) (13 . 9)) 3.935 {0/0:6} B:1 2.75031 [ 2.00080] ((7 . 4) (9 . 3) (11 . 7) (13 . 9)) 6.411 {0/0:6} B:1 SIMILARITY (1/min{score1}): 0.4545 [and 1/min{score2}: 0.6249] [2595, 3870]: Comparing 1isp_A and 1m7g_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 14 (9 H + 5 S) secondary structure elements in 1m7g_A, of which 13 satisfy the size requirements. 1.57157 [ 1.85723] ((1 . 3) (2 . 4) (4 . 5) (5 . 7) (6 . 8) (9 . 10) (15 . 14)) 3.466 {0/7:21} B:0 1.57164 [ 1.85727] ((1 . 3) (2 . 4) (4 . 5) (6 . 8) (11 . 10) (13 . 13) (15 . 14)) 3.851 {0/9:21} B:0 1.57165 [ 1.85728] ((1 . 3) (2 . 4) (4 . 5) (5 . 7) (6 . 8) (11 . 10) (15 . 14)) 3.862 {0/7:21} B:0 1.83367 [ 2.16687] ((1 . 3) (2 . 4) (4 . 5) (9 . 8) (11 . 10) (15 . 14)) 4.840 {0/5:15} B:0 1.83596 [ 2.16826] ((1 . 5) (2 . 7) (4 . 8) (5 . 9) (6 . 10) (11 . 13)) 8.074 {0/6:15} B:0 SIMILARITY (1/min{score1}): 0.8179 [and 1/min{score2}: 0.6922] [2595, 3933]: Comparing 1isp_A and 1mi8_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 18 (2 H + 16 S) secondary structure elements in 1mi8_A, of which 16 satisfy the size requirements. 2.75076 [ 4.00025] ((4 . 2) (6 . 6) (9 . 9) (13 . 15)) 8.031 {0/3:6} B:0 3.80250 [ 3.96971] ((1 . 17) (4 . 5) (6 . 18) (9 . 9) (11 . 8) (13 . 15)) 5.285 {3/8:15} B:3 7.15062 [ 7.17732] ((1 . 18) (6 . 17) (9 . 10) (11 . 9) (13 . 15) (14 . 4)) 7.042 {5/7:15} B:4 SIMILARITY (1/min{score1}): 0.3635 [and 1/min{score2}: 0.2519] [2595, 3938]: Comparing 1isp_A and 1miw_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 37 (26 H + 11 S) secondary structure elements in 1miw_A, of which 10 satisfy the size requirements. 2.75017 [ 2.50022] ((1 . 4) (2 . 5) (4 . 9) (5 . 12)) 5.509 {0/2:6} B:0 2.75040 [ 2.50054] ((1 . 4) (2 . 5) (4 . 9) (7 . 16)) 6.848 {0/3:6} B:0 2.75061 [ 2.50081] ((7 . 1) (9 . 4) (13 . 9) (14 . 12)) 7.580 {0/3:6} B:0 2.92503 [ 2.72417] ((2 . 5) (4 . 6) (6 . 9) (7 . 12)) 5.043 {1/5:6} B:0 3.66634 [ 3.57070] ((5 . 1) (9 . 4) (11 . 9) (14 . 12)) 7.208 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.4000] [2595, 3942]: Comparing 1isp_A and 1mj4_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 9 (5 H + 4 S) secondary structure elements in 1mj4_A, of which 7 satisfy the size requirements. NO SIMILARITY! [2595, 3968]: Comparing 1isp_A and 1ml4_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 26 (17 H + 9 S) secondary structure elements in 1ml4_A, of which 10 satisfy the size requirements. 1.57162 [ 1.42883] ((1 . 3) (2 . 4) (4 . 5) (5 . 8) (6 . 9) (7 . 10) (9 . 11)) 3.753 {0/7:21} B:0 1.83340 [ 1.66675] ((1 . 3) (4 . 5) (5 . 8) (6 . 9) (7 . 10) (9 . 11)) 3.193 {0/6:15} B:0 2.20007 [ 2.00010] ((1 . 3) (2 . 4) (4 . 5) (5 . 8) (6 . 11)) 3.785 {0/2:10} B:0 2.75015 [ 2.50020] ((1 . 3) (2 . 4) (5 . 10) (6 . 11)) 5.374 {0/1:6} B:0 2.75036 [ 2.50047] ((1 . 9) (2 . 10) (4 . 11) (5 . 12)) 6.636 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.6363 [and 1/min{score2}: 0.6999] [2595, 3986]: Comparing 1isp_A and 1mnn_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 32 (10 H + 22 S) secondary structure elements in 1mnn_A, of which 22 satisfy the size requirements. 2.75082 [ 5.50010] ((2 . 10) (7 . 19) (11 . 25) (13 . 26)) 8.183 {0/3:6} B:0 2.75160 [ 5.50020] ((1 . 9) (2 . 10) (7 . 19) (11 . 25)) 9.671 {0/5:6} B:0 2.75179 [ 5.50022] ((2 . 16) (5 . 19) (7 . 20) (13 . 27)) 9.948 {0/5:6} B:0 2.75188 [ 5.50024] ((1 . 9) (5 . 16) (7 . 19) (13 . 27)) 10.071 {0/4:6} B:0 2.75268 [ 5.50033] ((1 . 13) (5 . 20) (9 . 26) (13 . 29)) 10.994 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.3635 [and 1/min{score2}: 0.2096] [2595, 3990]: Comparing 1isp_A and 1mo9_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 42 (17 H + 25 S) secondary structure elements in 1mo9_A, of which 11 satisfy the size requirements. 2.36250 [ 2.36250] ((4 . 16) (5 . 17) (6 . 18) (7 . 19) (9 . 20)) 5.144 {1/6:10} B:0 2.75003 [ 2.75003] ((1 . 18) (2 . 19) (4 . 20) (9 . 26)) 3.448 {0/1:6} B:0 2.75041 [ 2.75041] ((6 . 16) (7 . 17) (9 . 20) (11 . 22)) 6.896 {0/1:6} B:0 2.75050 [ 2.75050] ((2 . 19) (4 . 20) (6 . 23) (9 . 25)) 7.215 {0/4:6} B:0 3.48138 [ 3.48138] ((4 . 18) (5 . 19) (6 . 20) (7 . 21) (9 . 22)) 5.373 {1/3:10} B:0 SIMILARITY (1/min{score1}): 0.5584 [and 1/min{score2}: 0.5584] [2595, 4005]: Comparing 1isp_A and 1mpp, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 41 (11 H + 30 S) secondary structure elements in 1mpp, of which 35 satisfy the size requirements. 2.75005 [ 8.75000] ((4 . 25) (5 . 28) (9 . 32) (13 . 40)) 3.965 {0/3:6} B:0 2.75050 [ 8.75002] ((4 . 24) (7 . 28) (11 . 35) (14 . 39)) 7.233 {0/4:6} B:0 2.75133 [ 8.75004] ((4 . 9) (6 . 14) (11 . 19) (13 . 22)) 9.221 {0/4:6} B:0 2.75157 [ 8.75005] ((4 . 25) (5 . 28) (9 . 32) (11 . 36)) 9.624 {0/4:6} B:0 2.75185 [ 8.75006] ((1 . 25) (2 . 28) (4 . 29) (9 . 36)) 10.022 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.1880] [2595, 4009]: Comparing 1isp_A and 1mqi_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 25 (12 H + 13 S) secondary structure elements in 1mqi_A, of which 21 satisfy the size requirements. 2.75013 [ 5.25002] ((2 . 6) (4 . 7) (5 . 8) (6 . 11)) 5.180 {0/3:6} B:0 2.75021 [ 5.25003] ((7 . 14) (9 . 15) (13 . 19) (14 . 20)) 5.845 {0/3:6} B:0 2.75151 [ 5.25022] ((1 . 1) (5 . 6) (13 . 15) (15 . 18)) 9.520 {0/0:6} B:0 2.75252 [ 5.25036] ((1 . 1) (5 . 6) (11 . 15) (15 . 18)) 10.830 {0/0:6} B:0 2.75273 [ 5.25039] ((2 . 10) (7 . 17) (13 . 23) (15 . 24)) 11.047 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.5188 [and 1/min{score2}: 0.3121] [2595, 4011]: Comparing 1isp_A and 1mqv_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 6 (6 H + 0 S) secondary structure elements in 1mqv_A, of which 6 satisfy the size requirements. NO SIMILARITY! [2595, 4019]: Comparing 1isp_A and 1ms9_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 52 (7 H + 45 S) secondary structure elements in 1ms9_A, of which 17 satisfy the size requirements. 2.75013 [ 4.25003] ((1 . 43) (4 . 45) (9 . 50) (11 . 51)) 5.132 {0/1:6} B:0 2.75030 [ 4.25008] ((6 . 36) (9 . 39) (11 . 43) (13 . 44)) 6.382 {0/1:6} B:0 2.75038 [ 4.25010] ((1 . 43) (4 . 46) (6 . 50) (9 . 51)) 6.749 {0/1:6} B:0 2.75049 [ 4.25013] ((1 . 35) (4 . 39) (6 . 43) (9 . 45)) 7.199 {0/1:6} B:0 2.75068 [ 4.25019] ((1 . 42) (4 . 44) (6 . 47) (9 . 50)) 7.814 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.3754 [and 1/min{score2}: 0.3135] [2595, 4030]: Comparing 1isp_A and 1mty_B, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 20 (20 H + 0 S) secondary structure elements in 1mty_B, of which 18 satisfy the size requirements. NO SIMILARITY! [2595, 4034]: Comparing 1isp_A and 1mu5_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 33 (18 H + 15 S) secondary structure elements in 1mu5_A, of which 14 satisfy the size requirements. 2.75047 [ 3.50023] ((4 . 10) (6 . 13) (7 . 14) (9 . 15)) 7.119 {0/2:6} B:0 2.75117 [ 3.50057] ((1 . 5) (9 . 10) (11 . 13) (14 . 14)) 8.934 {0/2:6} B:0 2.75123 [ 3.50060] ((5 . 3) (6 . 5) (11 . 9) (13 . 10)) 9.052 {0/2:6} B:0 2.75124 [ 3.50060] ((5 . 3) (6 . 5) (9 . 6) (13 . 10)) 9.073 {0/2:6} B:0 2.75125 [ 3.50061] ((2 . 7) (6 . 9) (9 . 10) (11 . 13)) 9.084 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.4538 [and 1/min{score2}: 0.3569] [2595, 4037]: Comparing 1isp_A and 1muc_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 28 (15 H + 13 S) secondary structure elements in 1muc_A, of which 8 satisfy the size requirements. 2.20062 [ 1.60160] ((9 . 1) (11 . 2) (13 . 3) (14 . 4) (15 . 5)) 6.441 {0/2:10} B:0 2.75037 [ 2.00097] ((9 . 1) (11 . 2) (13 . 3) (15 . 5)) 6.723 {0/0:6} B:0 2.75065 [ 2.00169] ((4 . 1) (6 . 2) (9 . 3) (15 . 7)) 7.715 {0/2:6} B:0 5.11078 [ 5.03183] ((9 . 2) (11 . 3) (14 . 6) (15 . 7)) 8.123 {1/2:6} B:0 6.06522 [ 6.01853] ((1 . 3) (2 . 4) (5 . 7) (7 . 8)) 8.611 {3/5:6} B:0 SIMILARITY (1/min{score1}): 0.4544 [and 1/min{score2}: 0.6244] [2595, 4062]: Comparing 1isp_A and 1mwv_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 54 (42 H + 12 S) secondary structure elements in 1mwv_A, of which 14 satisfy the size requirements. 4.20699 [ 4.48914] ((2 . 45) (5 . 47) (7 . 51) (9 . 50)) 7.772 {2/5:6} B:1 5.04630 [ 5.11873] ((2 . 34) (5 . 52) (7 . 51) (11 . 50) (13 . 49)) 7.559 {3/6:10} B:3 5.47210 [ 5.49988] ((2 . 45) (5 . 52) (6 . 50) (7 . 44) (9 . 49) (14 . 34)) 10.030 {6/11:15} B:3 SIMILARITY (1/min{score1}): 0.2377 [and 1/min{score2}: 0.2228] [2595, 4067]: Comparing 1isp_A and 1mx3_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 26 (14 H + 12 S) secondary structure elements in 1mx3_A, of which 14 satisfy the size requirements. 1.83350 [ 2.33341] ((2 . 15) (4 . 16) (5 . 19) (6 . 22) (9 . 24) (11 . 25)) 4.046 {0/9:15} B:0 1.83467 [ 2.33398] ((4 . 14) (5 . 17) (6 . 20) (9 . 22) (11 . 24) (13 . 25)) 6.816 {0/7:15} B:0 2.20016 [ 2.80008] ((5 . 21) (6 . 22) (7 . 23) (9 . 24) (11 . 25)) 4.598 {0/5:10} B:0 2.36346 [ 2.88465] ((2 . 12) (5 . 15) (9 . 20) (11 . 22) (13 . 24)) 7.950 {1/6:10} B:0 2.75016 [ 3.50008] ((2 . 11) (6 . 14) (9 . 16) (11 . 20)) 5.431 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.9437 [and 1/min{score2}: 0.7673] [2595, 4077]: Comparing 1isp_A and 1mxr_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 18 (16 H + 2 S) secondary structure elements in 1mxr_A, of which 17 satisfy the size requirements. 3.13381 [ 4.37245] ((2 . 3) (5 . 4) (7 . 6) (15 . 13)) 10.620 {1/4:6} B:0 3.14061 [ 4.37496] ((2 . 3) (5 . 4) (7 . 6) (15 . 12)) 16.130 {1/4:6} B:0 3.66736 [ 4.60566] ((5 . 1) (7 . 3) (14 . 7) (15 . 8)) 11.218 {1/3:6} B:0 5.11139 [ 5.55417] ((2 . 3) (5 . 5) (7 . 6) (15 . 13)) 12.656 {2/4:6} B:0 3.13368 [ 4.37240] ((2 . 9) (5 . 6) (14 . 7) (15 . 8)) 10.387 {1/4:6} B:1 SIMILARITY (1/min{score1}): 0.3191 [and 1/min{score2}: 0.2287] [2595, 4082]: Comparing 1isp_A and 1mzb_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 10 (5 H + 5 S) secondary structure elements in 1mzb_A, of which 10 satisfy the size requirements. 2.75056 [ 2.50075] ((2 . 3) (4 . 5) (6 . 7) (9 . 10)) 7.437 {0/4:6} B:0 2.75096 [ 2.50127] ((5 . 1) (7 . 3) (11 . 6) (13 . 8)) 8.497 {0/3:6} B:0 3.66623 [ 3.57058] ((5 . 1) (7 . 2) (9 . 6) (13 . 8)) 5.919 {1/3:6} B:0 3.66636 [ 3.57072] ((5 . 3) (7 . 4) (9 . 5) (13 . 10)) 7.369 {1/3:6} B:0 4.20709 [ 4.14486] ((2 . 1) (5 . 3) (9 . 6) (13 . 10)) 8.622 {2/5:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.3999] [2595, 4087]: Comparing 1isp_A and 1n08_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 11 (5 H + 6 S) secondary structure elements in 1n08_A, of which 10 satisfy the size requirements. 2.75017 [ 2.50023] ((2 . 2) (4 . 3) (6 . 6) (9 . 8)) 5.527 {0/4:6} B:0 2.75030 [ 2.50040] ((9 . 6) (11 . 8) (14 . 9) (15 . 10)) 6.358 {0/3:6} B:0 3.13252 [ 2.97335] ((5 . 4) (6 . 5) (9 . 7) (14 . 10)) 6.909 {1/4:6} B:0 3.66656 [ 3.57094] ((5 . 4) (6 . 5) (9 . 7) (11 . 8)) 8.630 {1/3:6} B:0 5.11082 [ 5.07652] ((4 . 1) (11 . 8) (14 . 9) (15 . 10)) 8.655 {2/4:6} B:0 SIMILARITY (1/min{score1}): 0.3753 [and 1/min{score2}: 0.4000] [2595, 4112]: Comparing 1isp_A and 1n27_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 8 (3 H + 5 S) secondary structure elements in 1n27_A, of which 7 satisfy the size requirements. 2.75070 [ 1.75270] ((9 . 1) (13 . 4) (14 . 7) (15 . 8)) 7.850 {0/3:6} B:0 2.75039 [ 1.75149] ((9 . 6) (11 . 1) (13 . 2) (15 . 8)) 6.770 {0/0:6} B:1 2.75100 [ 1.75387] ((9 . 1) (11 . 6) (13 . 2) (15 . 8)) 8.594 {0/0:6} B:1 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.5709] [2595, 4115]: Comparing 1isp_A and 1n2z_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 21 (11 H + 10 S) secondary structure elements in 1n2z_A, of which 19 satisfy the size requirements. 1.38987 [ 2.37793] ((1 . 13) (2 . 14) (4 . 15) (5 . 16) (6 . 17) (7 . 18) (9 . 19) (15 . 21)) 4.157 {1/16:28} B:0 1.57156 [ 2.71431] ((1 . 13) (2 . 14) (4 . 15) (5 . 16) (6 . 17) (9 . 19) (15 . 21)) 3.413 {0/11:21} B:0 1.63239 [ 2.72674] ((1 . 1) (2 . 2) (5 . 7) (6 . 8) (7 . 9) (9 . 10) (15 . 11)) 3.677 {1/10:21} B:0 2.20010 [ 3.80002] ((1 . 13) (2 . 14) (4 . 15) (5 . 16) (6 . 19)) 4.087 {0/3:10} B:0 2.20037 [ 3.80007] ((1 . 13) (2 . 14) (4 . 17) (5 . 18) (6 . 19)) 5.665 {0/3:10} B:0 SIMILARITY (1/min{score1}): 0.7270 [and 1/min{score2}: 0.4210] [2595, 4134]: Comparing 1isp_A and 1n5u_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 33 (33 H + 0 S) secondary structure elements in 1n5u_A, of which 10 satisfy the size requirements. NO SIMILARITY! [2595, 4140]: Comparing 1isp_A and 1n62_C, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 27 (13 H + 14 S) secondary structure elements in 1n62_C, of which 6 satisfy the size requirements. 2.75032 [ 1.50200] ((9 . 21) (11 . 22) (13 . 23) (15 . 26)) 6.487 {0/0:6} B:0 2.75149 [ 1.50911] ((9 . 21) (11 . 23) (14 . 25) (15 . 26)) 9.497 {0/1:6} B:0 2.75172 [ 1.51052] ((9 . 21) (13 . 23) (14 . 25) (15 . 26)) 9.848 {0/1:6} B:0 5.04638 [ 5.00432] ((9 . 21) (11 . 22) (13 . 23) (14 . 27) (15 . 26)) 8.795 {2/4:10} B:1 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.6658] [2595, 4151]: Comparing 1isp_A and 1n7k_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 20 (12 H + 8 S) secondary structure elements in 1n7k_A, of which 18 satisfy the size requirements. 1.57216 [ 2.57160] ((2 . 4) (4 . 5) (5 . 6) (6 . 7) (9 . 9) (11 . 12) (13 . 15)) 5.219 {0/12:21} B:0 1.57255 [ 2.57168] ((1 . 5) (2 . 6) (4 . 7) (5 . 8) (6 . 9) (9 . 12) (11 . 15)) 5.812 {0/9:21} B:0 1.83354 [ 3.00005] ((4 . 3) (5 . 4) (6 . 5) (9 . 7) (11 . 9) (13 . 12)) 4.282 {0/8:15} B:0 1.83386 [ 3.00012] ((2 . 11) (4 . 12) (5 . 14) (6 . 15) (9 . 17) (11 . 19)) 5.390 {0/10:15} B:0 1.83399 [ 3.00015] ((1 . 7) (2 . 8) (5 . 11) (9 . 15) (11 . 17) (13 . 19)) 5.702 {0/9:15} B:0 SIMILARITY (1/min{score1}): 0.9063 [and 1/min{score2}: 0.5553] [2595, 4154]: Comparing 1isp_A and 1n7o_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 59 (26 H + 33 S) secondary structure elements in 1n7o_A, of which 7 satisfy the size requirements. 2.75027 [ 1.75106] ((6 . 51) (9 . 53) (11 . 56) (13 . 57)) 6.210 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.5711] [2595, 4177]: Comparing 1isp_A and 1n9l_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 9 (4 H + 5 S) secondary structure elements in 1n9l_A, of which 8 satisfy the size requirements. 2.75139 [ 2.00360] ((1 . 2) (2 . 4) (5 . 6) (6 . 9)) 9.328 {0/3:6} B:0 2.75211 [ 2.00546] ((1 . 2) (2 . 4) (5 . 6) (9 . 9)) 10.356 {0/4:6} B:0 2.75229 [ 2.00594] ((4 . 2) (5 . 4) (7 . 6) (9 . 7)) 10.574 {0/4:6} B:0 2.75244 [ 2.00633] ((4 . 2) (5 . 4) (6 . 7) (7 . 6)) 10.748 {0/5:6} B:1 5.11075 [ 5.03179] ((1 . 1) (4 . 2) (11 . 7) (15 . 4)) 7.557 {2/4:6} B:1 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.4997] [2595, 4190]: Comparing 1isp_A and 1nbu_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 9 (5 H + 4 S) secondary structure elements in 1nbu_A, of which 8 satisfy the size requirements. 4.08863 [ 4.02546] ((1 . 3) (4 . 1) (5 . 7) (6 . 8) (9 . 9)) 6.531 {2/5:10} B:1 SIMILARITY (1/min{score1}): 0.2446 [and 1/min{score2}: 0.2484] [2595, 4192]: Comparing 1isp_A and 1nbw_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 53 (23 H + 30 S) secondary structure elements in 1nbw_A, of which 13 satisfy the size requirements. 2.20003 [ 2.60002] ((1 . 13) (5 . 14) (6 . 15) (7 . 16) (14 . 18)) 2.969 {0/4:10} B:0 2.75002 [ 3.25001] ((4 . 13) (5 . 14) (6 . 15) (7 . 16)) 3.096 {0/2:6} B:0 2.75014 [ 3.25008] ((4 . 10) (6 . 13) (7 . 14) (9 . 15)) 5.222 {0/3:6} B:0 2.75032 [ 3.25020] ((7 . 11) (9 . 13) (11 . 15) (15 . 20)) 6.483 {0/0:6} B:0 2.75037 [ 3.25022] ((1 . 10) (4 . 13) (5 . 14) (11 . 22)) 6.686 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.4545 [and 1/min{score2}: 0.3846] [2595, 4194]: Comparing 1isp_A and 1nbw_B, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 8 (3 H + 5 S) secondary structure elements in 1nbw_B, of which 8 satisfy the size requirements. 2.20159 [ 1.60411] ((1 . 1) (2 . 2) (5 . 4) (6 . 7) (7 . 8)) 8.160 {0/6:10} B:0 2.71266 [ 2.67982] ((1 . 1) (2 . 2) (4 . 3) (5 . 4) (6 . 5) (9 . 6) (11 . 7) (15 . 8)) 4.281 {4/15:28} B:0 2.75004 [ 2.00010] ((6 . 1) (11 . 5) (13 . 7) (15 . 8)) 3.775 {0/1:6} B:0 2.75006 [ 2.00016] ((2 . 2) (5 . 4) (6 . 5) (9 . 7)) 4.288 {0/4:6} B:0 2.75012 [ 2.00032] ((6 . 1) (9 . 3) (11 . 5) (15 . 8)) 5.081 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.5448 [and 1/min{score2}: 0.7467] [2595, 4195]: Comparing 1isp_A and 1nc5_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 19 (13 H + 6 S) secondary structure elements in 1nc5_A, of which 17 satisfy the size requirements. 2.75186 [ 4.25050] ((1 . 9) (5 . 11) (13 . 15) (15 . 17)) 10.040 {0/4:6} B:0 2.75117 [ 4.25032] ((5 . 4) (7 . 5) (13 . 9) (14 . 8)) 8.930 {0/4:6} B:1 3.13440 [ 4.37267] ((2 . 2) (5 . 4) (13 . 9) (14 . 8)) 11.498 {1/4:6} B:1 SIMILARITY (1/min{score1}): 0.3635 [and 1/min{score2}: 0.2353] [2595, 4204]: Comparing 1isp_A and 1ne2_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 15 (7 H + 8 S) secondary structure elements in 1ne2_A, of which 14 satisfy the size requirements. 1.83349 [ 2.33341] ((1 . 3) (2 . 4) (4 . 5) (6 . 9) (9 . 11) (11 . 14)) 3.969 {0/8:15} B:0 2.20007 [ 2.80003] ((5 . 2) (6 . 3) (7 . 4) (9 . 5) (11 . 7)) 3.702 {0/4:10} B:0 2.20016 [ 2.80008] ((1 . 3) (2 . 4) (5 . 10) (6 . 11) (7 . 12)) 4.565 {0/4:10} B:0 2.20040 [ 2.80019] ((1 . 5) (2 . 6) (4 . 7) (5 . 10) (6 . 11)) 5.772 {0/3:10} B:0 2.20244 [ 2.80119] ((5 . 2) (6 . 3) (7 . 4) (9 . 5) (13 . 11)) 9.090 {0/4:10} B:0 SIMILARITY (1/min{score1}): 0.8999 [and 1/min{score2}: 0.7115] [2595, 4209]: Comparing 1isp_A and 1ne8_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 11 (4 H + 7 S) secondary structure elements in 1ne8_A, of which 10 satisfy the size requirements. 2.75145 [ 2.50193] ((7 . 3) (9 . 5) (11 . 10) (14 . 11)) 9.436 {0/2:6} B:0 2.81182 [ 2.72431] ((7 . 3) (9 . 8) (11 . 1) (13 . 10) (14 . 11)) 6.155 {1/4:10} B:1 2.97150 [ 2.93677] ((6 . 8) (7 . 3) (9 . 2) (11 . 1) (13 . 10) (14 . 11)) 6.610 {2/7:15} B:3 SIMILARITY (1/min{score1}): 0.3634 [and 1/min{score2}: 0.3997] [2595, 4210]: Comparing 1isp_A and 1ne9_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 26 (13 H + 13 S) secondary structure elements in 1ne9_A, of which 10 satisfy the size requirements. 2.20134 [ 2.00179] ((1 . 6) (2 . 7) (4 . 8) (5 . 9) (6 . 10)) 7.826 {0/5:10} B:0 2.75056 [ 2.50074] ((1 . 4) (4 . 6) (5 . 7) (7 . 9)) 7.432 {0/3:6} B:0 2.75086 [ 2.50115] ((5 . 3) (9 . 6) (11 . 8) (14 . 9)) 8.287 {0/3:6} B:0 2.75522 [ 2.50693] ((9 . 4) (13 . 6) (14 . 7) (15 . 9)) 12.995 {0/3:6} B:0 3.13278 [ 2.97365] ((5 . 1) (6 . 4) (11 . 6) (13 . 8)) 8.137 {1/4:6} B:0 SIMILARITY (1/min{score1}): 0.5453 [and 1/min{score2}: 0.5997] [2595, 4216]: Comparing 1isp_A and 1nek_B, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 16 (9 H + 7 S) secondary structure elements in 1nek_B, of which 7 satisfy the size requirements. NO SIMILARITY! [2595, 4226]: Comparing 1isp_A and 1nf2_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 27 (13 H + 14 S) secondary structure elements in 1nf2_A, of which 24 satisfy the size requirements. 2.20026 [ 4.80002] ((1 . 4) (6 . 6) (11 . 22) (13 . 24) (15 . 27)) 5.173 {0/4:10} B:0 2.20027 [ 4.80003] ((6 . 1) (7 . 3) (9 . 4) (11 . 6) (13 . 9)) 5.243 {0/2:10} B:0 2.20050 [ 4.80005] ((1 . 1) (4 . 4) (5 . 5) (6 . 9) (15 . 20)) 6.111 {0/3:10} B:0 2.75001 [ 6.00000] ((5 . 20) (6 . 22) (7 . 23) (9 . 24)) 2.939 {0/2:6} B:0 2.75004 [ 6.00000] ((4 . 4) (5 . 5) (6 . 6) (9 . 9)) 3.830 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.8091 [and 1/min{score2}: 0.3748] [2595, 4232]: Comparing 1isp_A and 1nfi_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 23 (4 H + 19 S) secondary structure elements in 1nfi_A, of which 8 satisfy the size requirements. 3.66652 [ 3.43692] ((4 . 1) (9 . 3) (11 . 5) (13 . 6)) 8.403 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.2727 [and 1/min{score2}: 0.2910] [2595, 4236]: Comparing 1isp_A and 1ng2_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 13 (5 H + 8 S) secondary structure elements in 1ng2_A, of which 7 satisfy the size requirements. 2.75256 [ 1.75986] ((1 . 6) (4 . 10) (5 . 11) (7 . 13)) 10.871 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.3633 [and 1/min{score2}: 0.5682] [2595, 4242]: Comparing 1isp_A and 1ngn_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 10 (10 H + 0 S) secondary structure elements in 1ngn_A, of which 8 satisfy the size requirements. NO SIMILARITY! [2595, 4243]: Comparing 1isp_A and 1ngr, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 6 (6 H + 0 S) secondary structure elements in 1ngr, of which 6 satisfy the size requirements. NO SIMILARITY! [2595, 4246]: Comparing 1isp_A and 1nh0_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 11 (1 H + 10 S) secondary structure elements in 1nh0_A, of which 8 satisfy the size requirements. 3.13403 [ 2.72677] ((6 . 3) (9 . 5) (13 . 11) (14 . 10)) 10.968 {1/4:6} B:1 6.71448 [ 6.68020] ((4 . 7) (6 . 8) (9 . 5) (15 . 10)) 8.659 {2/3:6} B:1 2.75019 [ 2.00049] ((1 . 7) (6 . 8) (11 . 6) (13 . 5)) 5.671 {0/3:6} B:2 3.13239 [ 2.72428] ((4 . 7) (6 . 8) (11 . 6) (13 . 5)) 5.929 {1/4:6} B:2 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.4999] [2595, 4254]: Comparing 1isp_A and 1nh8_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 26 (10 H + 16 S) secondary structure elements in 1nh8_A, of which 20 satisfy the size requirements. 2.75012 [ 5.00002] ((7 . 10) (9 . 11) (11 . 15) (14 . 16)) 5.045 {0/3:6} B:0 2.75012 [ 5.00002] ((2 . 12) (4 . 13) (5 . 14) (6 . 17)) 5.094 {0/4:6} B:0 2.75018 [ 5.00003] ((2 . 5) (9 . 11) (11 . 15) (13 . 18)) 5.610 {0/3:6} B:0 2.75020 [ 5.00003] ((1 . 11) (2 . 12) (4 . 13) (6 . 18)) 5.745 {0/3:6} B:0 2.75030 [ 5.00005] ((7 . 10) (9 . 11) (11 . 13) (14 . 16)) 6.351 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.4545 [and 1/min{score2}: 0.3250] [2595, 4255]: Comparing 1isp_A and 1nh8_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 26 (10 H + 16 S) secondary structure elements in 1nh8_A, of which 7 satisfy the size requirements. 2.75009 [ 1.75033] ((1 . 21) (4 . 24) (5 . 25) (6 . 26)) 4.650 {0/1:6} B:0 2.75224 [ 1.75863] ((1 . 21) (2 . 22) (4 . 24) (5 . 25)) 10.514 {0/0:6} B:0 5.11080 [ 5.01881] ((2 . 22) (4 . 24) (5 . 25) (6 . 26)) 8.450 {1/2:6} B:0 6.71453 [ 6.67469] ((2 . 20) (4 . 21) (5 . 22) (6 . 23)) 9.901 {2/3:6} B:0 2.75014 [ 1.75053] ((1 . 24) (5 . 25) (6 . 21) (9 . 26)) 5.234 {0/1:6} B:1 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.5713] [2595, 4257]: Comparing 1isp_A and 1nhp, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 40 (15 H + 25 S) secondary structure elements in 1nhp, of which 11 satisfy the size requirements. 2.20057 [ 2.20057] ((1 . 1) (6 . 3) (7 . 6) (9 . 7) (11 . 10)) 6.314 {0/2:10} B:0 2.20059 [ 2.20059] ((1 . 1) (6 . 3) (7 . 6) (9 . 7) (13 . 10)) 6.367 {0/3:10} B:0 2.75001 [ 2.75001] ((6 . 1) (7 . 2) (9 . 3) (11 . 7)) 2.827 {0/0:6} B:0 2.75002 [ 2.75002] ((4 . 1) (5 . 2) (6 . 3) (9 . 7)) 3.320 {0/1:6} B:0 2.75003 [ 2.75003] ((6 . 1) (7 . 2) (9 . 3) (13 . 7)) 3.480 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.5454 [and 1/min{score2}: 0.5454] [2595, 4261]: Comparing 1isp_A and 1nhy_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 18 (14 H + 4 S) secondary structure elements in 1nhy_A, of which 8 satisfy the size requirements. NO SIMILARITY! [2595, 4265]: Comparing 1isp_A and 1ni4_B, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 31 (17 H + 14 S) secondary structure elements in 1ni4_B, of which 12 satisfy the size requirements. 1.37516 [ 1.50013] ((1 . 21) (2 . 22) (4 . 23) (5 . 25) (6 . 26) (7 . 27) (9 . 29) (15 . 31)) 3.252 {0/15:28} B:0 1.57150 [ 1.71434] ((1 . 21) (2 . 22) (4 . 23) (6 . 26) (7 . 27) (9 . 29) (15 . 31)) 2.874 {0/11:21} B:0 1.83338 [ 2.00004] ((1 . 21) (2 . 22) (4 . 23) (6 . 26) (7 . 27) (9 . 29)) 2.940 {0/8:15} B:0 1.83342 [ 2.00007] ((2 . 22) (4 . 23) (5 . 25) (6 . 26) (7 . 27) (9 . 29)) 3.452 {0/9:15} B:0 2.20012 [ 2.40009] ((1 . 21) (2 . 22) (4 . 26) (5 . 27) (6 . 29)) 4.241 {0/2:10} B:0 SIMILARITY (1/min{score1}): 0.7272 [and 1/min{score2}: 0.6666] [2595, 4266]: Comparing 1isp_A and 1ni5_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 40 (20 H + 20 S) secondary structure elements in 1ni5_A, of which 16 satisfy the size requirements. 1.57845 [ 2.28801] ((1 . 2) (2 . 3) (4 . 6) (5 . 7) (6 . 8) (9 . 12) (15 . 18)) 9.210 {0/10:21} B:0 2.20006 [ 3.20002] ((5 . 1) (6 . 2) (7 . 3) (9 . 4) (11 . 6)) 3.613 {0/4:10} B:0 2.20035 [ 3.20011] ((1 . 4) (2 . 5) (4 . 6) (5 . 7) (6 . 8)) 5.593 {0/3:10} B:0 2.20043 [ 3.20014] ((1 . 4) (2 . 5) (4 . 6) (5 . 7) (9 . 12)) 5.896 {0/5:10} B:0 2.20051 [ 3.20017] ((2 . 3) (4 . 4) (5 . 5) (9 . 8) (11 . 12)) 6.148 {0/6:10} B:0 SIMILARITY (1/min{score1}): 0.8147 [and 1/min{score2}: 0.5620] [2595, 4274]: Comparing 1isp_A and 1nj1_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 41 (14 H + 27 S) secondary structure elements in 1nj1_A, of which 6 satisfy the size requirements. 2.36237 [ 1.76902] ((4 . 36) (5 . 37) (6 . 38) (7 . 39) (9 . 40)) 3.925 {1/6:10} B:0 2.75010 [ 1.50061] ((6 . 36) (7 . 37) (9 . 38) (11 . 40)) 4.814 {0/0:6} B:0 2.75030 [ 1.50184] ((2 . 37) (4 . 38) (5 . 39) (6 . 40)) 6.359 {0/4:6} B:0 5.11067 [ 5.01011] ((4 . 36) (5 . 37) (7 . 39) (9 . 41)) 4.752 {2/4:6} B:0 2.20019 [ 1.20118] ((6 . 36) (7 . 37) (9 . 38) (11 . 41) (13 . 40)) 4.805 {0/1:10} B:1 SIMILARITY (1/min{score1}): 0.4545 [and 1/min{score2}: 0.8325] [2595, 4275]: Comparing 1isp_A and 1nj8_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 36 (15 H + 21 S) secondary structure elements in 1nj8_A, of which 9 satisfy the size requirements. 2.75012 [ 2.25022] ((1 . 21) (2 . 22) (4 . 25) (6 . 28)) 5.081 {0/2:6} B:0 2.75072 [ 2.25132] ((9 . 21) (11 . 23) (13 . 25) (15 . 26)) 7.926 {0/0:6} B:0 2.75143 [ 2.25261] ((1 . 23) (2 . 24) (4 . 27) (5 . 29)) 9.403 {0/1:6} B:0 2.75224 [ 2.25408] ((1 . 23) (2 . 24) (4 . 25) (7 . 29)) 10.515 {0/3:6} B:0 2.75230 [ 2.25420] ((6 . 21) (7 . 22) (9 . 23) (15 . 29)) 10.590 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.5452 [and 1/min{score2}: 0.6661] [2595, 4281]: Comparing 1isp_A and 1nk4_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 46 (29 H + 17 S) secondary structure elements in 1nk4_A, of which 12 satisfy the size requirements. 2.75029 [ 3.00022] ((1 . 8) (2 . 9) (4 . 10) (7 . 16)) 6.284 {0/4:6} B:0 2.75032 [ 3.00024] ((1 . 3) (6 . 8) (9 . 10) (15 . 16)) 6.444 {0/2:6} B:0 2.75039 [ 3.00030] ((6 . 3) (9 . 5) (11 . 8) (13 . 10)) 6.804 {0/1:6} B:0 2.75048 [ 3.00037] ((4 . 3) (6 . 8) (9 . 10) (15 . 16)) 7.161 {0/3:6} B:0 2.75050 [ 3.00038] ((6 . 5) (7 . 7) (9 . 8) (15 . 16)) 7.220 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.5237 [and 1/min{score2}: 0.5100] [2595, 4284]: Comparing 1isp_A and 1nki_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 12 (3 H + 9 S) secondary structure elements in 1nki_A, of which 11 satisfy the size requirements. 2.75036 [ 2.75036] ((1 . 6) (2 . 7) (4 . 10) (5 . 11)) 6.654 {0/2:6} B:0 3.13316 [ 3.13316] ((4 . 6) (5 . 7) (6 . 9) (7 . 11)) 9.293 {1/4:6} B:0 3.66816 [ 3.66816] ((1 . 3) (4 . 6) (5 . 7) (7 . 11)) 12.715 {1/3:6} B:0 5.11073 [ 5.11073] ((4 . 6) (5 . 7) (6 . 10) (7 . 11)) 7.233 {2/4:6} B:0 10.01428 [10.01428] ((6 . 1) (7 . 2) (9 . 3) (11 . 5)) 6.861 {1/1:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.3636] [2595, 4299]: Comparing 1isp_A and 1nlf_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 22 (11 H + 11 S) secondary structure elements in 1nlf_A, of which 17 satisfy the size requirements. 1.83342 [ 2.83336] ((1 . 6) (4 . 9) (5 . 10) (6 . 11) (9 . 14) (11 . 16)) 3.452 {0/6:15} B:0 1.83360 [ 2.83340] ((1 . 6) (4 . 9) (5 . 10) (6 . 11) (9 . 14) (13 . 20)) 4.542 {0/7:15} B:0 2.20005 [ 3.40001] ((1 . 6) (2 . 7) (6 . 11) (11 . 14) (13 . 16)) 3.443 {0/6:10} B:0 2.20119 [ 3.40032] ((4 . 2) (9 . 6) (11 . 9) (13 . 11) (15 . 13)) 7.596 {0/4:10} B:0 2.20136 [ 3.40037] ((2 . 5) (4 . 6) (5 . 7) (6 . 9) (9 . 11)) 7.845 {0/3:10} B:0 SIMILARITY (1/min{score1}): 0.9002 [and 1/min{score2}: 0.5872] [2595, 4301]: Comparing 1isp_A and 1nlq_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 10 (1 H + 9 S) secondary structure elements in 1nlq_A, of which 8 satisfy the size requirements. 2.75044 [ 2.00115] ((1 . 1) (4 . 3) (6 . 6) (9 . 9)) 7.008 {0/1:6} B:0 2.75258 [ 2.00669] ((4 . 1) (6 . 3) (9 . 6) (11 . 10)) 10.898 {0/2:6} B:0 2.20256 [ 1.60662] ((1 . 10) (4 . 3) (6 . 6) (9 . 9) (11 . 4)) 9.195 {0/2:10} B:2 SIMILARITY (1/min{score1}): 0.4540 [and 1/min{score2}: 0.6224] [2595, 4326]: Comparing 1isp_A and 1nnl_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 20 (12 H + 8 S) secondary structure elements in 1nnl_A, of which 17 satisfy the size requirements. 2.20007 [ 3.40002] ((1 . 7) (2 . 8) (5 . 14) (6 . 15) (7 . 16)) 3.793 {0/5:10} B:0 2.20119 [ 3.40032] ((4 . 7) (5 . 8) (9 . 15) (11 . 17) (13 . 19)) 7.588 {0/6:10} B:0 2.20287 [ 3.40078] ((1 . 2) (5 . 5) (6 . 7) (9 . 10) (13 . 15)) 9.468 {0/4:10} B:0 2.36277 [ 3.44820] ((2 . 14) (4 . 15) (6 . 17) (7 . 18) (9 . 19)) 6.358 {1/6:10} B:0 2.75005 [ 4.25001] ((1 . 2) (6 . 7) (7 . 8) (9 . 10)) 4.038 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.9005 [and 1/min{score2}: 0.5872] [2595, 4332]: Comparing 1isp_A and 1no5_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 9 (5 H + 4 S) secondary structure elements in 1no5_A, of which 8 satisfy the size requirements. 3.66623 [ 3.43657] ((1 . 2) (2 . 3) (4 . 4) (6 . 9)) 5.943 {1/3:6} B:0 4.20705 [ 4.06136] ((2 . 1) (4 . 2) (6 . 6) (7 . 8)) 8.314 {2/5:6} B:0 5.11079 [ 5.03184] ((2 . 1) (4 . 2) (5 . 3) (9 . 9)) 8.290 {2/4:6} B:0 5.11117 [ 5.03224] ((4 . 2) (5 . 5) (6 . 6) (7 . 8)) 11.609 {2/4:6} B:0 10.01427 [10.00400] ((1 . 4) (2 . 5) (4 . 6) (5 . 8)) 4.885 {1/1:6} B:0 SIMILARITY (1/min{score1}): 0.2728 [and 1/min{score2}: 0.2910] [2595, 4338]: Comparing 1isp_A and 1now_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 36 (18 H + 18 S) secondary structure elements in 1now_A, of which 9 satisfy the size requirements. 2.20027 [ 1.80050] ((1 . 4) (2 . 5) (4 . 6) (6 . 8) (9 . 11)) 5.262 {0/3:10} B:0 2.75001 [ 2.25003] ((9 . 4) (11 . 6) (13 . 8) (15 . 9)) 2.991 {0/0:6} B:0 2.75016 [ 2.25029] ((6 . 4) (9 . 6) (11 . 8) (13 . 11)) 5.437 {0/1:6} B:0 2.75018 [ 2.25033] ((9 . 4) (11 . 6) (13 . 7) (15 . 9)) 5.592 {0/0:6} B:0 2.75053 [ 2.25097] ((6 . 2) (11 . 6) (13 . 8) (15 . 9)) 7.339 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.4545 [and 1/min{score2}: 0.5554] [2595, 4352]: Comparing 1isp_A and 1nq7_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 17 (14 H + 3 S) secondary structure elements in 1nq7_A, of which 16 satisfy the size requirements. 3.13383 [ 4.14525] ((2 . 6) (4 . 9) (5 . 11) (7 . 12)) 10.644 {1/4:6} B:0 SIMILARITY (1/min{score1}): 0.3191 [and 1/min{score2}: 0.2412] [2595, 4359]: Comparing 1isp_A and 1nr0_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 57 (2 H + 55 S) secondary structure elements in 1nr0_A, of which 26 satisfy the size requirements. 2.20020 [ 5.20002] ((1 . 12) (6 . 13) (9 . 14) (11 . 17) (13 . 19)) 4.878 {0/3:10} B:0 2.75003 [ 6.50000] ((4 . 14) (6 . 18) (11 . 22) (13 . 24)) 3.483 {0/2:6} B:0 2.75007 [ 6.50001] ((6 . 3) (9 . 5) (11 . 7) (13 . 9)) 4.364 {0/1:6} B:0 2.75007 [ 6.50001] ((6 . 3) (9 . 4) (11 . 7) (13 . 9)) 4.427 {0/1:6} B:0 2.75008 [ 6.50001] ((6 . 6) (9 . 7) (11 . 10) (13 . 12)) 4.579 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.5454 [and 1/min{score2}: 0.2308] [2595, 4380]: Comparing 1isp_A and 1nsz_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 39 (8 H + 31 S) secondary structure elements in 1nsz_A, of which 22 satisfy the size requirements. 2.75045 [ 5.50006] ((1 . 2) (4 . 4) (9 . 14) (11 . 17)) 7.036 {0/2:6} B:0 2.75101 [ 5.50013] ((4 . 3) (5 . 6) (11 . 14) (13 . 17)) 8.608 {0/2:6} B:0 2.75163 [ 5.50020] ((1 . 15) (4 . 18) (11 . 29) (13 . 31)) 9.718 {0/3:6} B:0 2.75345 [ 5.50043] ((1 . 15) (4 . 18) (6 . 23) (11 . 29)) 11.715 {0/3:6} B:0 3.13322 [ 5.55796] ((4 . 23) (5 . 27) (7 . 28) (9 . 29)) 9.432 {1/4:6} B:0 SIMILARITY (1/min{score1}): 0.4544 [and 1/min{score2}: 0.2273] [2595, 4383]: Comparing 1isp_A and 1nt0_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 22 (1 H + 21 S) secondary structure elements in 1nt0_A, of which 8 satisfy the size requirements. 2.75020 [ 2.00051] ((1 . 16) (4 . 18) (6 . 21) (9 . 22)) 5.710 {0/0:6} B:0 2.75041 [ 2.00107] ((1 . 14) (4 . 16) (6 . 18) (11 . 22)) 6.879 {0/1:6} B:0 3.66705 [ 3.43757] ((4 . 15) (6 . 17) (9 . 19) (11 . 22)) 10.442 {1/3:6} B:0 5.11071 [ 5.03175] ((1 . 14) (4 . 16) (9 . 21) (11 . 22)) 6.583 {1/2:6} B:0 10.00587 [10.00165] ((1 . 16) (6 . 21) (9 . 15) (11 . 22) (13 . 17)) 8.109 {1/1:10} B:2 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.4999] [2595, 4386]: Comparing 1isp_A and 1nt4_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 23 (13 H + 10 S) secondary structure elements in 1nt4_A, of which 21 satisfy the size requirements. 2.75045 [ 5.25006] ((4 . 16) (6 . 18) (9 . 19) (14 . 23)) 7.044 {0/3:6} B:0 2.75168 [ 5.25024] ((5 . 14) (7 . 15) (9 . 16) (13 . 19)) 9.781 {0/3:6} B:0 2.75756 [ 5.25109] ((2 . 11) (5 . 12) (7 . 14) (15 . 20)) 14.265 {0/4:6} B:0 3.13254 [ 5.31629] ((5 . 14) (6 . 16) (7 . 17) (11 . 19)) 7.027 {1/4:6} B:0 3.66627 [ 5.45145] ((5 . 15) (6 . 16) (7 . 17) (11 . 19)) 6.522 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.2647] [2595, 4388]: Comparing 1isp_A and 1ntf_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 18 (7 H + 11 S) secondary structure elements in 1ntf_A, of which 16 satisfy the size requirements. 2.20043 [ 3.20014] ((2 . 2) (5 . 4) (6 . 5) (11 . 10) (13 . 12)) 5.888 {0/6:10} B:0 2.20044 [ 3.20014] ((1 . 3) (2 . 4) (4 . 5) (9 . 10) (11 . 12)) 5.920 {0/4:10} B:0 2.20099 [ 3.20032] ((1 . 1) (4 . 3) (5 . 4) (6 . 5) (11 . 10)) 7.253 {0/0:10} B:0 2.20129 [ 3.20042] ((2 . 2) (5 . 4) (9 . 8) (11 . 10) (13 . 12)) 7.745 {0/6:10} B:0 2.20129 [ 3.20042] ((5 . 4) (6 . 5) (9 . 8) (11 . 10) (13 . 12)) 7.750 {0/3:10} B:0 SIMILARITY (1/min{score1}): 0.6358 [and 1/min{score2}: 0.4530] [2595, 4398]: Comparing 1isp_A and 1nul_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 14 (6 H + 8 S) secondary structure elements in 1nul_A, of which 12 satisfy the size requirements. 2.20007 [ 2.40006] ((2 . 5) (5 . 9) (6 . 10) (7 . 11) (9 . 12)) 3.790 {0/4:10} B:0 2.20015 [ 2.40012] ((2 . 5) (4 . 6) (5 . 9) (6 . 10) (9 . 12)) 4.536 {0/5:10} B:0 2.20019 [ 2.40014] ((1 . 4) (2 . 5) (4 . 8) (5 . 9) (6 . 10)) 4.772 {0/2:10} B:0 2.20022 [ 2.40017] ((1 . 4) (2 . 5) (4 . 6) (5 . 9) (6 . 10)) 4.954 {0/3:10} B:0 2.20024 [ 2.40018] ((1 . 4) (2 . 5) (4 . 6) (6 . 8) (9 . 12)) 5.063 {0/5:10} B:0 SIMILARITY (1/min{score1}): 0.8175 [and 1/min{score2}: 0.7496] [2595, 4405]: Comparing 1isp_A and 1nvm_B, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 26 (12 H + 14 S) secondary structure elements in 1nvm_B, of which 11 satisfy the size requirements. 2.75033 [ 2.75033] ((1 . 14) (2 . 17) (4 . 18) (11 . 25)) 6.506 {0/3:6} B:0 2.75048 [ 2.75048] ((2 . 13) (4 . 14) (5 . 17) (6 . 18)) 7.150 {0/2:6} B:0 2.75060 [ 2.75060] ((4 . 19) (5 . 20) (6 . 22) (9 . 25)) 7.566 {0/1:6} B:0 2.75102 [ 2.75102] ((4 . 19) (5 . 20) (6 . 21) (9 . 25)) 8.628 {0/1:6} B:0 2.75184 [ 2.75184] ((2 . 13) (4 . 14) (7 . 17) (9 . 18)) 10.012 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.3636] [2595, 4408]: Comparing 1isp_A and 1nvr_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 24 (11 H + 13 S) secondary structure elements in 1nvr_A, of which 16 satisfy the size requirements. 2.75179 [ 4.00058] ((7 . 10) (11 . 14) (14 . 19) (15 . 20)) 9.946 {0/2:6} B:0 2.75254 [ 4.00083] ((1 . 4) (4 . 6) (11 . 14) (15 . 20)) 10.856 {0/3:6} B:0 2.75353 [ 4.00115] ((1 . 2) (5 . 5) (11 . 14) (15 . 20)) 11.780 {0/4:6} B:0 3.13402 [ 4.14533] ((5 . 10) (6 . 13) (14 . 21) (15 . 22)) 10.955 {1/4:6} B:0 3.66825 [ 4.41479] ((6 . 4) (7 . 5) (9 . 6) (14 . 10)) 12.855 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.3634 [and 1/min{score2}: 0.2887] [2595, 4415]: Comparing 1isp_A and 1nwa_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 14 (6 H + 8 S) secondary structure elements in 1nwa_A, of which 9 satisfy the size requirements. 2.20127 [ 1.80231] ((1 . 1) (2 . 5) (4 . 9) (5 . 10) (6 . 11)) 7.713 {0/2:10} B:0 2.20147 [ 1.80269] ((1 . 4) (2 . 5) (4 . 9) (5 . 10) (6 . 11)) 8.012 {0/3:10} B:0 2.36236 [ 2.06595] ((4 . 4) (5 . 5) (6 . 9) (7 . 10) (9 . 11)) 3.842 {1/6:10} B:0 2.75027 [ 2.25050] ((4 . 1) (5 . 2) (6 . 3) (9 . 4)) 6.203 {0/1:6} B:0 2.75083 [ 2.25152] ((5 . 2) (6 . 3) (9 . 4) (14 . 10)) 8.207 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.4543 [and 1/min{score2}: 0.5548] [2595, 4419]: Comparing 1isp_A and 1nww_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 11 (4 H + 7 S) secondary structure elements in 1nww_A, of which 10 satisfy the size requirements. 2.75062 [ 2.50083] ((2 . 2) (4 . 3) (6 . 8) (9 . 10)) 7.626 {0/2:6} B:0 2.75078 [ 2.50103] ((5 . 5) (9 . 6) (11 . 8) (14 . 11)) 8.065 {0/3:6} B:0 3.13343 [ 2.97441] ((2 . 5) (4 . 6) (6 . 9) (7 . 11)) 9.897 {1/4:6} B:0 3.66671 [ 3.57110] ((7 . 5) (9 . 6) (11 . 9) (14 . 11)) 9.294 {1/3:6} B:0 3.66677 [ 3.57116] ((1 . 6) (4 . 8) (6 . 10) (7 . 11)) 9.513 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.3999] [2595, 4426]: Comparing 1isp_A and 1nxi_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 6 (3 H + 3 S) secondary structure elements in 1nxi_A, of which 6 satisfy the size requirements. 3.66692 [ 3.36801] ((5 . 1) (9 . 2) (11 . 4) (14 . 5)) 10.050 {1/3:6} B:0 5.11097 [ 5.01042] ((5 . 1) (6 . 2) (9 . 4) (13 . 6)) 10.216 {1/2:6} B:0 6.71447 [ 6.67100] ((2 . 3) (4 . 4) (5 . 5) (6 . 6)) 8.352 {2/3:6} B:0 3.66627 [ 3.36717] ((1 . 2) (2 . 1) (5 . 3) (6 . 4)) 6.517 {1/3:6} B:1 3.66628 [ 3.36718] ((2 . 1) (5 . 3) (6 . 2) (9 . 4)) 6.595 {1/3:6} B:1 SIMILARITY (1/min{score1}): 0.2728 [and 1/min{score2}: 0.2970] [2595, 4470]: Comparing 1isp_A and 1o14_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 25 (10 H + 15 S) secondary structure elements in 1o14_A, of which 23 satisfy the size requirements. 1.83345 [ 3.83335] ((5 . 11) (6 . 12) (7 . 13) (9 . 14) (13 . 18) (15 . 22)) 3.680 {0/5:15} B:0 2.20004 [ 4.60000] ((5 . 13) (6 . 14) (7 . 15) (11 . 18) (13 . 20)) 3.295 {0/5:10} B:0 2.20005 [ 4.60001] ((5 . 13) (6 . 14) (7 . 15) (11 . 18) (15 . 22)) 3.504 {0/3:10} B:0 2.20030 [ 4.60003] ((1 . 5) (2 . 6) (5 . 11) (6 . 12) (9 . 14)) 5.387 {0/5:10} B:0 2.20039 [ 4.60004] ((2 . 6) (5 . 11) (6 . 12) (9 . 14) (13 . 18)) 5.726 {0/7:10} B:0 SIMILARITY (1/min{score1}): 0.9879 [and 1/min{score2}: 0.4779] [2595, 4491]: Comparing 1isp_A and 1o51_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 8 (2 H + 6 S) secondary structure elements in 1o51_A, of which 6 satisfy the size requirements. 2.75045 [ 1.50277] ((4 . 1) (5 . 4) (6 . 5) (9 . 6)) 7.039 {0/1:6} B:0 2.75157 [ 1.50960] ((9 . 1) (11 . 5) (13 . 6) (15 . 7)) 9.623 {0/0:6} B:0 5.11096 [ 5.01042] ((4 . 1) (5 . 4) (6 . 5) (11 . 8)) 10.182 {1/2:6} B:0 2.75016 [ 1.50100] ((1 . 6) (4 . 1) (5 . 4) (6 . 5)) 5.450 {0/1:6} B:1 2.75042 [ 1.50261] ((6 . 8) (11 . 1) (13 . 6) (15 . 7)) 6.933 {0/1:6} B:1 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.6662] [2595, 4492]: Comparing 1isp_A and 1o54_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 26 (10 H + 16 S) secondary structure elements in 1o54_A, of which 20 satisfy the size requirements. 1.83339 [ 3.33334] ((1 . 11) (2 . 12) (4 . 13) (6 . 18) (9 . 21) (11 . 23)) 3.129 {0/5:15} B:0 1.83454 [ 3.33353] ((2 . 12) (4 . 13) (5 . 14) (9 . 18) (11 . 21) (13 . 23)) 6.648 {0/8:15} B:0 1.83498 [ 3.33361] ((2 . 10) (4 . 11) (5 . 12) (6 . 13) (7 . 14) (9 . 16)) 7.189 {0/8:15} B:0 2.20003 [ 4.00000] ((4 . 18) (5 . 19) (6 . 21) (7 . 22) (9 . 23)) 2.982 {0/4:10} B:0 2.20007 [ 4.00001] ((1 . 13) (2 . 14) (4 . 16) (6 . 18) (7 . 19)) 3.689 {0/5:10} B:0 SIMILARITY (1/min{score1}): 0.8179 [and 1/min{score2}: 0.4500] [2595, 4495]: Comparing 1isp_A and 1o58_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 22 (13 H + 9 S) secondary structure elements in 1o58_A, of which 19 satisfy the size requirements. 1.83345 [ 3.16669] ((5 . 5) (6 . 6) (7 . 7) (9 . 8) (11 . 10) (15 . 11)) 3.715 {0/4:15} B:0 1.83369 [ 3.16674] ((5 . 5) (6 . 6) (7 . 7) (9 . 8) (11 . 10) (14 . 11)) 4.901 {0/5:15} B:0 2.20013 [ 3.80003] ((5 . 13) (6 . 14) (7 . 15) (9 . 16) (15 . 20)) 4.387 {0/4:10} B:0 2.20018 [ 3.80003] ((5 . 13) (6 . 14) (7 . 15) (9 . 16) (11 . 18)) 4.703 {0/4:10} B:0 2.20230 [ 3.80045] ((1 . 8) (5 . 12) (9 . 14) (11 . 16) (13 . 18)) 8.959 {0/6:10} B:0 SIMILARITY (1/min{score1}): 0.7100 [and 1/min{score2}: 0.4199] [2595, 4497]: Comparing 1isp_A and 1o59_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 30 (6 H + 24 S) secondary structure elements in 1o59_A, of which 9 satisfy the size requirements. 2.75021 [ 2.25038] ((1 . 23) (4 . 25) (6 . 28) (9 . 30)) 5.806 {0/2:6} B:0 2.75030 [ 2.25054] ((1 . 23) (4 . 25) (6 . 27) (9 . 30)) 6.344 {0/3:6} B:0 2.75034 [ 2.25061] ((1 . 18) (2 . 20) (6 . 26) (9 . 28)) 6.545 {0/4:6} B:0 2.75044 [ 2.25080] ((1 . 18) (2 . 20) (6 . 24) (9 . 26)) 6.982 {0/4:6} B:0 2.75058 [ 2.25106] ((1 . 18) (2 . 20) (6 . 24) (11 . 28)) 7.494 {0/4:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.4444] [2595, 4502]: Comparing 1isp_A and 1o5o_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 21 (6 H + 15 S) secondary structure elements in 1o5o_A, of which 15 satisfy the size requirements. 1.83344 [ 2.50004] ((1 . 6) (2 . 7) (6 . 11) (7 . 13) (9 . 14) (11 . 17)) 3.585 {0/7:15} B:0 2.20005 [ 3.00002] ((2 . 7) (5 . 13) (6 . 14) (7 . 16) (9 . 17)) 3.438 {0/5:10} B:0 2.20054 [ 3.00021] ((1 . 9) (4 . 11) (5 . 13) (6 . 14) (9 . 17)) 6.221 {0/3:10} B:0 2.20078 [ 3.00031] ((1 . 11) (2 . 13) (4 . 14) (5 . 16) (6 . 17)) 6.829 {0/1:10} B:0 2.75021 [ 3.75008] ((1 . 1) (11 . 11) (13 . 14) (15 . 16)) 5.814 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.9026 [and 1/min{score2}: 0.6819] [2595, 4503]: Comparing 1isp_A and 1o5u_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 10 (1 H + 9 S) secondary structure elements in 1o5u_A, of which 10 satisfy the size requirements. NO SIMILARITY! [2595, 4504]: Comparing 1isp_A and 1o5z_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 36 (19 H + 17 S) secondary structure elements in 1o5z_A, of which 20 satisfy the size requirements. 1.57174 [ 2.85719] ((1 . 6) (5 . 12) (6 . 13) (9 . 15) (11 . 17) (13 . 19) (15 . 23)) 4.225 {0/9:21} B:0 1.83566 [ 3.33372] ((1 . 4) (2 . 5) (4 . 6) (11 . 15) (13 . 17) (15 . 18)) 7.835 {0/7:15} B:0 2.20013 [ 4.00002] ((2 . 5) (6 . 13) (9 . 15) (11 . 17) (13 . 19)) 4.403 {0/4:10} B:0 2.20020 [ 4.00003] ((4 . 15) (5 . 16) (6 . 17) (7 . 18) (9 . 19)) 4.832 {0/4:10} B:0 2.20022 [ 4.00004] ((5 . 12) (6 . 13) (9 . 15) (11 . 19) (15 . 23)) 4.987 {0/3:10} B:0 SIMILARITY (1/min{score1}): 0.9379 [and 1/min{score2}: 0.5464] [2595, 4505]: Comparing 1isp_A and 1o5z_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 36 (19 H + 17 S) secondary structure elements in 1o5z_A, of which 10 satisfy the size requirements. 1.83341 [ 1.66677] ((1 . 28) (2 . 29) (4 . 30) (5 . 33) (6 . 34) (7 . 35)) 3.378 {0/6:15} B:0 2.20016 [ 2.00021] ((1 . 30) (2 . 31) (5 . 33) (6 . 34) (7 . 35)) 4.578 {0/6:10} B:0 2.20070 [ 2.00094] ((4 . 26) (5 . 27) (6 . 28) (9 . 30) (11 . 34)) 6.656 {0/3:10} B:0 2.20077 [ 2.00102] ((1 . 28) (2 . 29) (4 . 30) (5 . 31) (9 . 34)) 6.809 {0/3:10} B:0 2.20087 [ 2.00116] ((1 . 28) (2 . 29) (4 . 30) (5 . 31) (6 . 34)) 7.025 {0/3:10} B:0 SIMILARITY (1/min{score1}): 0.7268 [and 1/min{score2}: 0.7992] [2595, 4516]: Comparing 1isp_A and 1o6v_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 43 (18 H + 25 S) secondary structure elements in 1o6v_A, of which 34 satisfy the size requirements. 1.83359 [ 5.66668] ((1 . 14) (6 . 16) (7 . 17) (9 . 18) (11 . 20) (13 . 22)) 4.522 {0/0:15} B:0 1.83370 [ 5.66668] ((1 . 12) (6 . 14) (7 . 15) (9 . 16) (11 . 18) (13 . 20)) 4.944 {0/0:15} B:0 1.83392 [ 5.66669] ((5 . 11) (6 . 12) (7 . 13) (9 . 14) (11 . 16) (13 . 20)) 5.544 {0/0:15} B:0 2.20014 [ 6.80000] ((6 . 16) (7 . 17) (9 . 18) (11 . 20) (13 . 22)) 4.407 {0/0:10} B:0 2.20016 [ 6.80001] ((6 . 12) (7 . 13) (9 . 14) (11 . 16) (13 . 18)) 4.594 {0/0:10} B:0 SIMILARITY (1/min{score1}): 0.7269 [and 1/min{score2}: 0.2353] [2595, 4527]: Comparing 1isp_A and 1o7b_T, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 8 (2 H + 6 S) secondary structure elements in 1o7b_T, of which 6 satisfy the size requirements. NO SIMILARITY! [2595, 4538]: Comparing 1isp_A and 1o7f_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 39 (19 H + 20 S) secondary structure elements in 1o7f_A, of which 11 satisfy the size requirements. 2.75096 [ 2.75096] ((2 . 27) (4 . 30) (6 . 32) (7 . 36)) 8.496 {0/5:6} B:0 3.66709 [ 3.66709] ((7 . 27) (9 . 30) (14 . 36) (15 . 39)) 10.548 {1/3:6} B:0 5.11106 [ 5.11106] ((2 . 29) (4 . 32) (5 . 36) (7 . 39)) 10.890 {2/4:6} B:0 2.75027 [ 2.75027] ((1 . 38) (4 . 30) (6 . 32) (7 . 36)) 6.175 {0/3:6} B:1 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.3636] [2595, 4551]: Comparing 1isp_A and 1o8b_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 18 (5 H + 13 S) secondary structure elements in 1o8b_A, of which 7 satisfy the size requirements. 2.75009 [ 1.75037] ((6 . 1) (9 . 2) (11 . 4) (13 . 8)) 4.770 {0/1:6} B:0 2.75013 [ 1.75049] ((4 . 1) (6 . 4) (7 . 7) (9 . 8)) 5.134 {0/2:6} B:0 2.75015 [ 1.75060] ((1 . 1) (4 . 4) (6 . 8) (13 . 17)) 5.382 {0/2:6} B:0 2.75028 [ 1.75110] ((1 . 2) (4 . 4) (6 . 8) (13 . 17)) 6.269 {0/2:6} B:0 4.02364 [ 4.00393] ((1 . 1) (4 . 2) (6 . 4) (7 . 7) (9 . 8) (11 . 17) (13 . 18)) 4.716 {4/10:21} B:0 SIMILARITY (1/min{score1}): 0.4545 [and 1/min{score2}: 0.7143] [2595, 4560]: Comparing 1isp_A and 1o97_C, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 24 (11 H + 13 S) secondary structure elements in 1o97_C, of which 18 satisfy the size requirements. 1.83344 [ 3.00002] ((2 . 5) (4 . 6) (5 . 10) (6 . 11) (7 . 12) (11 . 14)) 3.621 {0/6:15} B:0 1.83352 [ 3.00004] ((1 . 6) (2 . 7) (4 . 8) (5 . 10) (6 . 11) (7 . 12)) 4.145 {0/7:15} B:0 2.20004 [ 3.60001] ((1 . 1) (5 . 5) (6 . 6) (7 . 7) (9 . 8)) 3.146 {0/4:10} B:0 2.20016 [ 3.60004] ((2 . 5) (4 . 8) (5 . 10) (6 . 11) (7 . 12)) 4.603 {0/4:10} B:0 2.75005 [ 4.50001] ((6 . 1) (11 . 6) (13 . 8) (15 . 10)) 4.034 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.9019 [and 1/min{score2}: 0.5549] [2595, 4561]: Comparing 1isp_A and 1o97_D, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 30 (12 H + 18 S) secondary structure elements in 1o97_D, of which 15 satisfy the size requirements. 1.57169 [ 2.14296] ((1 . 1) (2 . 4) (4 . 5) (5 . 8) (6 . 9) (7 . 11) (11 . 14)) 4.032 {0/8:21} B:0 1.83345 [ 2.50004] ((2 . 4) (4 . 5) (5 . 8) (6 . 9) (7 . 11) (9 . 12)) 3.676 {0/7:15} B:0 1.83416 [ 2.50033] ((1 . 1) (2 . 4) (4 . 5) (5 . 6) (9 . 9) (11 . 12)) 6.041 {0/7:15} B:0 2.20019 [ 3.00007] ((4 . 7) (5 . 8) (6 . 9) (7 . 11) (9 . 12)) 4.786 {0/5:10} B:0 2.20072 [ 3.00028] ((1 . 1) (2 . 4) (4 . 5) (5 . 6) (6 . 7)) 6.695 {0/2:10} B:0 SIMILARITY (1/min{score1}): 0.9011 [and 1/min{score2}: 0.6650] [2595, 4562]: Comparing 1isp_A and 1o97_D, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 30 (12 H + 18 S) secondary structure elements in 1o97_D, of which 10 satisfy the size requirements. 1.83352 [ 1.66692] ((2 . 21) (4 . 22) (5 . 26) (6 . 27) (7 . 28) (9 . 29)) 4.170 {0/7:15} B:0 2.20007 [ 2.00009] ((1 . 19) (2 . 21) (4 . 22) (6 . 27) (9 . 29)) 3.708 {0/5:10} B:0 2.20009 [ 2.00012] ((1 . 19) (2 . 21) (4 . 22) (6 . 25) (7 . 26)) 3.986 {0/2:10} B:0 2.20027 [ 2.00035] ((1 . 22) (5 . 26) (6 . 27) (7 . 28) (9 . 29)) 5.216 {0/4:10} B:0 2.50615 [ 2.37883] ((5 . 21) (9 . 25) (11 . 27) (13 . 29) (14 . 30)) 6.205 {1/5:10} B:0 SIMILARITY (1/min{score1}): 0.8175 [and 1/min{score2}: 0.8990] [2595, 4563]: Comparing 1isp_A and 1o98_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 37 (21 H + 16 S) secondary structure elements in 1o98_A, of which 16 satisfy the size requirements. 1.83351 [ 2.66673] ((1 . 26) (2 . 27) (4 . 28) (5 . 30) (6 . 31) (9 . 34)) 4.132 {0/5:15} B:0 1.83359 [ 2.66675] ((1 . 26) (2 . 27) (4 . 28) (5 . 30) (6 . 31) (11 . 34)) 4.492 {0/5:15} B:0 1.83360 [ 2.66675] ((1 . 26) (2 . 27) (4 . 28) (9 . 31) (11 . 34) (15 . 37)) 4.577 {0/7:15} B:0 2.20024 [ 3.20008] ((4 . 26) (7 . 30) (9 . 31) (11 . 34) (15 . 37)) 5.107 {0/2:10} B:0 2.20092 [ 3.20030] ((5 . 27) (7 . 30) (9 . 31) (13 . 34) (15 . 37)) 7.125 {0/4:10} B:0 SIMILARITY (1/min{score1}): 0.9065 [and 1/min{score2}: 0.6246] [2595, 4577]: Comparing 1isp_A and 1oac_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 63 (15 H + 48 S) secondary structure elements in 1oac_A, of which 31 satisfy the size requirements. 2.75204 [ 7.75009] ((1 . 34) (4 . 37) (11 . 43) (13 . 46)) 10.268 {0/4:6} B:0 2.75273 [ 7.75012] ((4 . 42) (9 . 48) (11 . 50) (13 . 52)) 11.049 {0/3:6} B:0 2.75350 [ 7.75016] ((1 . 52) (7 . 59) (9 . 60) (11 . 62)) 11.758 {0/2:6} B:0 2.75424 [ 7.75019] ((1 . 48) (6 . 54) (9 . 58) (13 . 60)) 12.340 {0/1:6} B:0 2.75433 [ 7.75019] ((1 . 40) (4 . 42) (9 . 48) (13 . 52)) 12.402 {0/4:6} B:0 SIMILARITY (1/min{score1}): 0.3634 [and 1/min{score2}: 0.1860] [2595, 4579]: Comparing 1isp_A and 1oah_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 34 (26 H + 8 S) secondary structure elements in 1oah_A, of which 22 satisfy the size requirements. 2.75763 [ 5.50096] ((4 . 17) (5 . 21) (7 . 22) (15 . 26)) 14.295 {0/4:6} B:0 2.92988 [ 5.52462] ((2 . 13) (5 . 16) (6 . 18) (15 . 25)) 13.431 {1/5:6} B:0 3.13257 [ 5.55784] ((5 . 11) (7 . 13) (14 . 21) (15 . 22)) 7.202 {1/4:6} B:0 4.20799 [ 5.85029] ((2 . 13) (5 . 16) (7 . 21) (15 . 25)) 12.330 {2/5:6} B:0 5.11091 [ 6.26461] ((2 . 3) (5 . 5) (7 . 7) (14 . 13)) 9.723 {2/4:6} B:0 SIMILARITY (1/min{score1}): 0.3634 [and 1/min{score2}: 0.1818] [2595, 4588]: Comparing 1isp_A and 1obf_O, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 31 (12 H + 19 S) secondary structure elements in 1obf_O, of which 12 satisfy the size requirements. 1.56634 [ 1.65528] ((1 . 1) (2 . 2) (4 . 3) (6 . 11) (7 . 12) (9 . 13) (11 . 16) (15 . 31)) 3.875 {2/16:28} B:0 2.20011 [ 2.40008] ((2 . 2) (4 . 3) (9 . 11) (11 . 13) (13 . 16)) 4.152 {0/6:10} B:0 2.20042 [ 2.40032] ((6 . 1) (7 . 2) (9 . 3) (11 . 9) (15 . 12)) 5.848 {0/1:10} B:0 2.20143 [ 2.40110] ((2 . 2) (6 . 7) (9 . 11) (11 . 13) (13 . 16)) 7.944 {0/5:10} B:0 2.20496 [ 2.40382] ((1 . 7) (4 . 11) (5 . 12) (6 . 13) (9 . 16)) 10.855 {0/4:10} B:0 SIMILARITY (1/min{score1}): 0.8139 [and 1/min{score2}: 0.7472] [2595, 4589]: Comparing 1isp_A and 1obf_O, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 31 (12 H + 19 S) secondary structure elements in 1obf_O, of which 13 satisfy the size requirements. 2.75047 [ 3.25029] ((1 . 23) (2 . 24) (4 . 25) (5 . 26)) 7.122 {0/1:6} B:0 2.75055 [ 3.25033] ((2 . 17) (4 . 18) (9 . 23) (14 . 26)) 7.398 {0/2:6} B:0 2.75094 [ 3.25057] ((2 . 17) (4 . 18) (5 . 20) (6 . 22)) 8.457 {0/3:6} B:0 2.75149 [ 3.25090] ((1 . 22) (4 . 23) (6 . 27) (9 . 30)) 9.495 {0/2:6} B:0 2.75203 [ 3.25123] ((5 . 17) (7 . 20) (11 . 23) (14 . 24)) 10.255 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.4540 [and 1/min{score2}: 0.3844] [2595, 4607]: Comparing 1isp_A and 1odo_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 31 (20 H + 11 S) secondary structure elements in 1odo_A, of which 22 satisfy the size requirements. 4.20800 [ 5.85030] ((2 . 8) (5 . 11) (14 . 18) (15 . 19)) 12.364 {2/5:6} B:0 4.20818 [ 5.85037] ((2 . 13) (7 . 17) (14 . 21) (15 . 22)) 12.803 {2/5:6} B:0 SIMILARITY (1/min{score1}): 0.2376 [and 1/min{score2}: 0.1709] [2595, 4621]: Comparing 1isp_A and 1of5_B, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 11 (4 H + 7 S) secondary structure elements in 1of5_B, of which 11 satisfy the size requirements. 2.75137 [ 2.75137] ((1 . 4) (2 . 5) (4 . 8) (6 . 11)) 9.290 {0/3:6} B:0 2.75152 [ 2.75152] ((7 . 2) (11 . 8) (13 . 9) (14 . 10)) 9.541 {0/3:6} B:0 2.75194 [ 2.75194] ((1 . 4) (2 . 5) (4 . 7) (6 . 9)) 10.146 {0/1:6} B:0 5.11096 [ 5.11096] ((2 . 1) (5 . 5) (9 . 8) (11 . 11)) 10.177 {2/4:6} B:0 5.11113 [ 5.11113] ((2 . 2) (5 . 5) (6 . 8) (11 . 11)) 11.349 {2/4:6} B:0 SIMILARITY (1/min{score1}): 0.3635 [and 1/min{score2}: 0.3635] [2595, 4630]: Comparing 1isp_A and 1ofm_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 46 (7 H + 39 S) secondary structure elements in 1ofm_A, of which 41 satisfy the size requirements. 2.20004 [ 8.20000] ((1 . 5) (6 . 8) (9 . 11) (11 . 14) (13 . 17)) 3.333 {0/0:10} B:0 2.20008 [ 8.20000] ((1 . 12) (6 . 15) (9 . 18) (11 . 21) (13 . 24)) 3.884 {0/0:10} B:0 2.20009 [ 8.20000] ((1 . 16) (6 . 22) (9 . 25) (11 . 28) (13 . 31)) 4.002 {0/1:10} B:0 2.20012 [ 8.20000] ((1 . 14) (6 . 20) (9 . 23) (11 . 26) (13 . 29)) 4.317 {0/0:10} B:0 2.20013 [ 8.20000] ((1 . 14) (4 . 17) (6 . 20) (11 . 26) (13 . 29)) 4.366 {0/0:10} B:0 SIMILARITY (1/min{score1}): 0.6363 [and 1/min{score2}: 0.1707] [2595, 4648]: Comparing 1isp_A and 1ogw_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 8 (3 H + 5 S) secondary structure elements in 1ogw_A, of which 6 satisfy the size requirements. 2.92571 [ 2.14426] ((4 . 1) (5 . 3) (6 . 5) (7 . 7)) 8.454 {1/5:6} B:0 2.75116 [ 1.50712] ((11 . 2) (13 . 5) (14 . 3) (15 . 7)) 8.923 {0/3:6} B:1 SIMILARITY (1/min{score1}): 0.3635 [and 1/min{score2}: 0.6635] [2595, 4653]: Comparing 1isp_A and 1oh1_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 9 (1 H + 8 S) secondary structure elements in 1oh1_A, of which 9 satisfy the size requirements. 2.75186 [ 2.25338] ((5 . 2) (6 . 5) (9 . 7) (11 . 9)) 10.032 {0/3:6} B:0 3.66628 [ 3.49446] ((2 . 2) (6 . 5) (9 . 7) (11 . 8)) 6.637 {1/3:6} B:0 6.02697 [ 6.01215] ((2 . 2) (6 . 5) (9 . 6) (11 . 7) (13 . 8)) 6.650 {3/5:10} B:0 SIMILARITY (1/min{score1}): 0.3634 [and 1/min{score2}: 0.4438] [2595, 4665]: Comparing 1isp_A and 1oi1_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 16 (6 H + 10 S) secondary structure elements in 1oi1_A, of which 6 satisfy the size requirements. NO SIMILARITY! [2595, 4668]: Comparing 1isp_A and 1oi7_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 23 (10 H + 13 S) secondary structure elements in 1oi7_A, of which 10 satisfy the size requirements. 1.37520 [ 1.25026] ((1 . 1) (2 . 2) (4 . 3) (5 . 6) (6 . 7) (7 . 8) (9 . 9) (11 . 11)) 3.408 {0/15:28} B:0 1.57156 [ 1.42874] ((1 . 1) (2 . 2) (4 . 3) (5 . 6) (6 . 7) (9 . 9) (11 . 11)) 3.383 {0/11:21} B:0 1.83344 [ 1.66682] ((1 . 1) (2 . 2) (4 . 3) (5 . 6) (6 . 7) (9 . 11)) 3.664 {0/7:15} B:0 2.20008 [ 2.00011] ((1 . 1) (2 . 2) (4 . 5) (5 . 6) (7 . 8)) 3.893 {0/4:10} B:0 2.20018 [ 2.00024] ((2 . 2) (5 . 8) (6 . 9) (7 . 10) (9 . 11)) 4.737 {0/4:10} B:0 SIMILARITY (1/min{score1}): 0.8364 [and 1/min{score2}: 0.8921] [2595, 4669]: Comparing 1isp_A and 1oi7_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 23 (10 H + 13 S) secondary structure elements in 1oi7_A, of which 11 satisfy the size requirements. 1.37526 [ 1.37526] ((1 . 15) (2 . 16) (4 . 17) (5 . 18) (6 . 19) (7 . 20) (9 . 21) (15 . 23)) 3.643 {0/12:28} B:0 2.20013 [ 2.20013] ((6 . 15) (9 . 17) (11 . 19) (13 . 21) (15 . 23)) 4.398 {0/1:10} B:0 2.75004 [ 2.75004] ((2 . 16) (5 . 20) (6 . 21) (7 . 22)) 3.753 {0/3:6} B:0 2.75005 [ 2.75005] ((1 . 19) (2 . 20) (4 . 21) (5 . 23)) 4.015 {0/0:6} B:0 2.75029 [ 2.75029] ((5 . 16) (9 . 19) (11 . 21) (15 . 23)) 6.279 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.7271 [and 1/min{score2}: 0.7271] [2595, 4671]: Comparing 1isp_A and 1oih_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 22 (6 H + 16 S) secondary structure elements in 1oih_A, of which 21 satisfy the size requirements. 2.29196 [ 4.21400] ((4 . 2) (5 . 3) (6 . 4) (7 . 5) (11 . 7)) 4.149 {1/7:10} B:0 2.75025 [ 5.25004] ((1 . 2) (4 . 4) (5 . 5) (6 . 7)) 6.049 {0/1:6} B:0 2.75037 [ 5.25005] ((1 . 4) (2 . 5) (4 . 6) (6 . 7)) 6.723 {0/2:6} B:0 2.75057 [ 5.25008] ((2 . 3) (4 . 4) (5 . 5) (9 . 7)) 7.463 {0/3:6} B:0 2.75068 [ 5.25010] ((1 . 2) (2 . 3) (5 . 5) (6 . 7)) 7.810 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.4609 [and 1/min{score2}: 0.3186] [2595, 4674]: Comparing 1isp_A and 1oj5_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 9 (3 H + 6 S) secondary structure elements in 1oj5_A, of which 9 satisfy the size requirements. 2.75175 [ 2.25318] ((1 . 2) (2 . 4) (5 . 5) (9 . 9)) 9.879 {0/5:6} B:0 2.75525 [ 2.25956] ((4 . 2) (5 . 4) (7 . 5) (11 . 9)) 13.019 {0/4:6} B:0 5.11108 [ 5.05093] ((4 . 2) (5 . 4) (7 . 5) (9 . 8)) 11.028 {2/4:6} B:0 2.75400 [ 2.25728] ((4 . 2) (5 . 4) (6 . 6) (7 . 5)) 12.156 {0/4:6} B:1 6.68645 [ 6.67561] ((1 . 1) (2 . 4) (6 . 8) (9 . 9) (13 . 7)) 9.503 {4/6:10} B:1 SIMILARITY (1/min{score1}): 0.3634 [and 1/min{score2}: 0.4438] [2595, 4678]: Comparing 1isp_A and 1ojq_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 16 (8 H + 8 S) secondary structure elements in 1ojq_A, of which 14 satisfy the size requirements. 2.75047 [ 3.50023] ((2 . 3) (5 . 7) (9 . 10) (11 . 12)) 7.100 {0/4:6} B:0 3.66672 [ 4.06717] ((2 . 3) (5 . 7) (7 . 8) (9 . 10)) 9.322 {1/3:6} B:0 5.11079 [ 5.27648] ((2 . 3) (5 . 7) (9 . 10) (11 . 15)) 8.286 {2/4:6} B:0 5.11113 [ 5.27679] ((4 . 6) (5 . 7) (7 . 9) (9 . 10)) 11.363 {2/4:6} B:0 2.75132 [ 3.50064] ((5 . 2) (7 . 3) (13 . 10) (14 . 9)) 9.215 {0/4:6} B:1 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.2971] [2595, 4699]: Comparing 1isp_A and 1okt_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 13 (9 H + 4 S) secondary structure elements in 1okt_A, of which 6 satisfy the size requirements. 2.75239 [ 1.51455] ((5 . 8) (7 . 9) (14 . 13) (15 . 12)) 10.690 {0/3:6} B:1 SIMILARITY (1/min{score1}): 0.3633 [and 1/min{score2}: 0.6603] [2595, 4713]: Comparing 1isp_A and 1omi_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 21 (9 H + 12 S) secondary structure elements in 1omi_A, of which 10 satisfy the size requirements. 3.66651 [ 3.57088] ((11 . 7) (13 . 9) (14 . 10) (15 . 11)) 8.343 {1/3:6} B:0 3.66669 [ 3.57108] ((9 . 5) (13 . 9) (14 . 10) (15 . 11)) 9.220 {1/3:6} B:0 6.71446 [ 6.69944] ((9 . 5) (11 . 7) (13 . 9) (14 . 10)) 8.078 {2/3:6} B:0 2.75028 [ 2.50037] ((6 . 7) (9 . 4) (11 . 3) (13 . 9)) 6.223 {0/1:6} B:2 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.3999] [2595, 4715]: Comparing 1isp_A and 1omr_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 16 (14 H + 2 S) secondary structure elements in 1omr_A, of which 14 satisfy the size requirements. 2.75134 [ 3.50065] ((2 . 1) (5 . 4) (7 . 7) (15 . 14)) 9.243 {0/3:6} B:0 5.11152 [ 5.27714] ((2 . 1) (5 . 2) (7 . 4) (14 . 11)) 13.178 {2/4:6} B:0 SIMILARITY (1/min{score1}): 0.3635 [and 1/min{score2}: 0.2857] [2595, 4716]: Comparing 1isp_A and 1omw_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 45 (28 H + 17 S) secondary structure elements in 1omw_A, of which 10 satisfy the size requirements. 2.75109 [ 2.50145] ((5 . 1) (7 . 3) (14 . 8) (15 . 9)) 8.778 {0/4:6} B:0 SIMILARITY (1/min{score1}): 0.3635 [and 1/min{score2}: 0.3998] [2595, 4731]: Comparing 1isp_A and 1ono_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 29 (18 H + 11 S) secondary structure elements in 1ono_A, of which 12 satisfy the size requirements. 2.75056 [ 3.00043] ((2 . 15) (4 . 18) (9 . 22) (11 . 24)) 7.427 {0/4:6} B:0 2.75058 [ 3.00044] ((2 . 15) (7 . 19) (9 . 22) (13 . 24)) 7.489 {0/3:6} B:0 2.75088 [ 3.00068] ((2 . 15) (4 . 18) (7 . 20) (9 . 22)) 8.319 {0/3:6} B:0 2.92775 [ 3.14057] ((2 . 15) (5 . 17) (7 . 19) (11 . 24)) 11.667 {1/5:6} B:0 3.13262 [ 3.31050] ((2 . 15) (4 . 18) (7 . 19) (9 . 22)) 7.436 {1/4:6} B:0 SIMILARITY (1/min{score1}): 0.3753 [and 1/min{score2}: 0.3670] [2595, 4734]: Comparing 1isp_A and 1onw_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 34 (15 H + 19 S) secondary structure elements in 1onw_A, of which 10 satisfy the size requirements. NO SIMILARITY! [2595, 4764]: Comparing 1isp_A and 1orn_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 14 (14 H + 0 S) secondary structure elements in 1orn_A, of which 12 satisfy the size requirements. 3.13788 [ 3.31497] ((2 . 3) (5 . 6) (7 . 8) (15 . 14)) 14.613 {1/4:6} B:0 5.11238 [ 5.15636] ((2 . 6) (5 . 8) (7 . 9) (14 . 14)) 15.681 {2/4:6} B:0 SIMILARITY (1/min{score1}): 0.3187 [and 1/min{score2}: 0.3017] [2595, 4783]: Comparing 1isp_A and 1otk_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 12 (12 H + 0 S) secondary structure elements in 1otk_A, of which 9 satisfy the size requirements. NO SIMILARITY! [2595, 4817]: Comparing 1isp_A and 1oxj_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 13 (13 H + 0 S) secondary structure elements in 1oxj_A, of which 7 satisfy the size requirements. NO SIMILARITY! [2595, 4857]: Comparing 1isp_A and 1p15_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 16 (6 H + 10 S) secondary structure elements in 1p15_A, of which 11 satisfy the size requirements. 2.20334 [ 2.20334] ((1 . 3) (2 . 4) (9 . 11) (11 . 13) (14 . 14)) 9.835 {0/4:10} B:0 2.75004 [ 2.75004] ((4 . 3) (5 . 4) (6 . 5) (11 . 11)) 3.829 {0/4:6} B:0 2.75006 [ 2.75006] ((6 . 3) (9 . 5) (13 . 11) (15 . 12)) 4.213 {0/1:6} B:0 2.75011 [ 2.75011] ((6 . 3) (7 . 4) (9 . 5) (15 . 12)) 4.929 {0/0:6} B:0 2.75019 [ 2.75019] ((5 . 4) (6 . 5) (13 . 11) (15 . 12)) 5.693 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.4544 [and 1/min{score2}: 0.4544] [2595, 4886]: Comparing 1isp_A and 1p49_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 36 (19 H + 17 S) secondary structure elements in 1p49_A, of which 25 satisfy the size requirements. 2.20219 [ 5.00019] ((2 . 18) (4 . 19) (5 . 20) (6 . 22) (15 . 28)) 8.844 {0/3:10} B:0 2.75014 [ 6.25001] ((1 . 19) (5 . 20) (6 . 22) (9 . 24)) 5.251 {0/0:6} B:0 2.75037 [ 6.25003] ((4 . 17) (5 . 18) (6 . 19) (11 . 22)) 6.687 {0/2:6} B:0 2.75056 [ 6.25005] ((1 . 1) (5 . 6) (11 . 9) (13 . 11)) 7.445 {0/0:6} B:0 2.75082 [ 6.25007] ((2 . 18) (7 . 20) (9 . 22) (15 . 27)) 8.167 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.9082 [and 1/min{score2}: 0.4000] [2595, 4888]: Comparing 1isp_A and 1p4d_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 24 (11 H + 13 S) secondary structure elements in 1p4d_A, of which 19 satisfy the size requirements. 2.75106 [ 4.75021] ((4 . 1) (5 . 2) (6 . 4) (14 . 11)) 8.725 {0/3:6} B:0 2.75365 [ 4.75071] ((2 . 5) (7 . 11) (9 . 12) (13 . 16)) 11.884 {0/3:6} B:0 3.13429 [ 4.83917] ((4 . 9) (5 . 11) (9 . 14) (11 . 17)) 11.345 {1/4:6} B:0 5.11090 [ 5.80326] ((2 . 2) (5 . 6) (9 . 9) (13 . 14)) 9.670 {2/4:6} B:0 5.11117 [ 5.80345] ((1 . 9) (2 . 11) (6 . 14) (15 . 23)) 11.593 {2/4:6} B:0 SIMILARITY (1/min{score1}): 0.3635 [and 1/min{score2}: 0.3014] [2595, 4889]: Comparing 1isp_A and 1p4o_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 24 (15 H + 9 S) secondary structure elements in 1p4o_A, of which 17 satisfy the size requirements. 2.75079 [ 4.25022] ((2 . 9) (4 . 11) (5 . 13) (15 . 24)) 8.111 {0/3:6} B:0 2.75175 [ 4.25047] ((2 . 5) (4 . 6) (11 . 12) (15 . 19)) 9.881 {0/4:6} B:0 2.75218 [ 4.25059] ((1 . 4) (2 . 5) (11 . 12) (15 . 19)) 10.445 {0/5:6} B:0 2.92627 [ 4.30160] ((2 . 5) (7 . 8) (13 . 12) (14 . 13)) 9.683 {1/5:6} B:0 3.13235 [ 4.37191] ((4 . 2) (6 . 4) (7 . 5) (9 . 6)) 5.468 {1/4:6} B:0 SIMILARITY (1/min{score1}): 0.5189 [and 1/min{score2}: 0.3496] [2595, 4907]: Comparing 1isp_A and 1p5t_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 10 (3 H + 7 S) secondary structure elements in 1p5t_A, of which 9 satisfy the size requirements. 5.11091 [ 5.05075] ((5 . 2) (9 . 5) (11 . 9) (14 . 10)) 9.696 {2/4:6} B:0 5.11104 [ 5.05088] ((5 . 2) (9 . 5) (13 . 9) (14 . 10)) 10.745 {2/4:6} B:0 5.11069 [ 5.05052] ((6 . 5) (7 . 2) (9 . 4) (13 . 3)) 5.798 {1/2:6} B:2 10.00586 [10.00263] ((6 . 5) (7 . 2) (9 . 4) (11 . 3) (13 . 1)) 6.291 {2/2:10} B:3 SIMILARITY (1/min{score1}): 0.1957 [and 1/min{score2}: 0.1980] [2595, 4914]: Comparing 1isp_A and 1p6p_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 12 (2 H + 10 S) secondary structure elements in 1p6p_A, of which 12 satisfy the size requirements. 2.75029 [ 3.00022] ((1 . 4) (4 . 6) (6 . 10) (9 . 12)) 6.316 {0/3:6} B:0 2.75049 [ 3.00038] ((1 . 1) (4 . 5) (6 . 9) (9 . 11)) 7.187 {0/3:6} B:0 2.75142 [ 3.00110] ((2 . 3) (4 . 4) (9 . 10) (11 . 12)) 9.387 {0/3:6} B:0 3.66621 [ 3.78145] ((4 . 6) (6 . 10) (9 . 11) (11 . 12)) 5.599 {1/3:6} B:0 3.66713 [ 3.78229] ((5 . 2) (7 . 3) (11 . 8) (13 . 11)) 10.642 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.3752 [and 1/min{score2}: 0.3669] [2595, 4921]: Comparing 1isp_A and 1p7b_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 17 (7 H + 10 S) secondary structure elements in 1p7b_A, of which 9 satisfy the size requirements. 2.75041 [ 2.25076] ((1 . 7) (4 . 9) (7 . 13) (11 . 17)) 6.892 {0/4:6} B:0 2.75088 [ 2.25160] ((4 . 7) (6 . 9) (9 . 12) (13 . 15)) 8.314 {0/4:6} B:0 3.13248 [ 2.83637] ((4 . 9) (6 . 12) (7 . 13) (11 . 17)) 6.673 {1/4:6} B:0 3.66646 [ 3.49467] ((4 . 7) (9 . 12) (11 . 14) (13 . 15)) 8.046 {1/3:6} B:0 6.71459 [ 6.68837] ((4 . 8) (7 . 11) (9 . 14) (11 . 15)) 10.957 {2/3:6} B:0 SIMILARITY (1/min{score1}): 0.6110 [and 1/min{score2}: 0.7158] [2595, 4929]: Comparing 1isp_A and 1p8j_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 35 (14 H + 21 S) secondary structure elements in 1p8j_A, of which 8 satisfy the size requirements. 2.75035 [ 2.00092] ((1 . 28) (4 . 31) (6 . 34) (9 . 35)) 6.630 {0/2:6} B:0 2.75036 [ 2.00094] ((1 . 28) (4 . 31) (6 . 33) (9 . 35)) 6.662 {0/3:6} B:0 2.75046 [ 2.00120] ((4 . 26) (6 . 29) (9 . 32) (11 . 34)) 7.089 {0/3:6} B:0 2.75067 [ 2.00175] ((6 . 26) (9 . 28) (11 . 29) (13 . 32)) 7.784 {0/1:6} B:0 2.75076 [ 2.00198] ((1 . 26) (4 . 29) (6 . 32) (9 . 34)) 8.031 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.4998] [2595, 4932]: Comparing 1isp_A and 1p8x_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 26 (10 H + 16 S) secondary structure elements in 1p8x_A, of which 10 satisfy the size requirements. 2.75009 [ 2.50012] ((1 . 1) (4 . 4) (7 . 7) (9 . 8)) 4.753 {0/4:6} B:0 2.75018 [ 2.50024] ((4 . 1) (6 . 6) (7 . 7) (9 . 8)) 5.606 {0/2:6} B:0 2.75024 [ 2.50033] ((4 . 4) (6 . 6) (7 . 7) (9 . 8)) 6.045 {0/3:6} B:0 2.75026 [ 2.50035] ((1 . 1) (2 . 3) (5 . 7) (6 . 8)) 6.142 {0/3:6} B:0 2.75037 [ 2.50049] ((1 . 1) (4 . 6) (5 . 7) (6 . 8)) 6.699 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.6643 [and 1/min{score2}: 0.7071] [2595, 4940]: Comparing 1isp_A and 1p9a_G, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 16 (4 H + 12 S) secondary structure elements in 1p9a_G, of which 14 satisfy the size requirements. 2.20014 [ 2.80007] ((1 . 8) (6 . 9) (9 . 10) (11 . 12) (13 . 13)) 4.445 {0/0:10} B:0 2.75008 [ 3.50004] ((6 . 9) (9 . 11) (11 . 12) (13 . 13)) 4.575 {0/0:6} B:0 2.75008 [ 3.50004] ((4 . 3) (5 . 5) (9 . 8) (11 . 10)) 4.592 {0/2:6} B:0 2.75058 [ 3.50028] ((1 . 4) (6 . 9) (9 . 10) (11 . 11)) 7.491 {0/0:6} B:0 2.75069 [ 3.50033] ((6 . 2) (9 . 3) (11 . 7) (13 . 8)) 7.818 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.6362 [and 1/min{score2}: 0.5000] [2595, 4941]: Comparing 1isp_A and 1p9h_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 21 (1 H + 20 S) secondary structure elements in 1p9h_A, of which 10 satisfy the size requirements. NO SIMILARITY! [2595, 4944]: Comparing 1isp_A and 1p9l_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 19 (8 H + 11 S) secondary structure elements in 1p9l_A, of which 8 satisfy the size requirements. 2.75019 [ 2.00050] ((1 . 11) (2 . 12) (6 . 14) (9 . 16)) 5.688 {0/1:6} B:0 2.75078 [ 2.00202] ((2 . 10) (4 . 11) (5 . 12) (9 . 14)) 8.071 {0/1:6} B:0 2.75098 [ 2.00254] ((2 . 10) (4 . 11) (5 . 12) (9 . 16)) 8.549 {0/1:6} B:0 2.75119 [ 2.00309] ((2 . 10) (4 . 11) (5 . 12) (11 . 16)) 8.976 {0/1:6} B:0 2.75173 [ 2.00449] ((2 . 10) (4 . 11) (5 . 12) (9 . 15)) 9.858 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.4544 [and 1/min{score2}: 0.6241] [2595, 4961]: Comparing 1isp_A and 1pbt_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 20 (10 H + 10 S) secondary structure elements in 1pbt_A, of which 16 satisfy the size requirements. 2.20027 [ 3.20009] ((5 . 2) (6 . 3) (7 . 4) (9 . 6) (14 . 11)) 5.223 {0/5:10} B:0 2.20042 [ 3.20014] ((4 . 1) (5 . 2) (6 . 3) (7 . 4) (9 . 6)) 5.848 {0/6:10} B:0 2.20202 [ 3.20066] ((4 . 1) (5 . 2) (6 . 3) (7 . 4) (14 . 11)) 8.672 {0/6:10} B:0 2.20249 [ 3.20081] ((1 . 12) (2 . 13) (6 . 17) (7 . 18) (9 . 20)) 9.133 {0/5:10} B:0 2.20564 [ 3.20184] ((1 . 1) (2 . 2) (4 . 3) (6 . 6) (7 . 8)) 11.214 {0/5:10} B:0 SIMILARITY (1/min{score1}): 0.8436 [and 1/min{score2}: 0.6134] [2595, 4963]: Comparing 1isp_A and 1pbw_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 10 (10 H + 0 S) secondary structure elements in 1pbw_A, of which 8 satisfy the size requirements. 3.66689 [ 3.43737] ((5 . 3) (7 . 5) (14 . 8) (15 . 9)) 9.951 {1/3:6} B:0 6.71456 [ 6.68029] ((2 . 2) (5 . 3) (7 . 9) (15 . 8)) 10.579 {2/3:6} B:1 SIMILARITY (1/min{score1}): 0.2727 [and 1/min{score2}: 0.2909] [2595, 4978]: Comparing 1isp_A and 1pd1_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 58 (29 H + 29 S) secondary structure elements in 1pd1_A, of which 15 satisfy the size requirements. 1.37524 [ 1.87509] ((1 . 18) (2 . 20) (4 . 21) (5 . 27) (6 . 28) (9 . 30) (11 . 32) (15 . 33)) 3.572 {0/11:28} B:0 2.20017 [ 3.00007] ((5 . 27) (6 . 28) (9 . 30) (11 . 32) (14 . 33)) 4.665 {0/2:10} B:0 2.20028 [ 3.00011] ((1 . 21) (4 . 24) (9 . 28) (11 . 30) (15 . 33)) 5.285 {0/6:10} B:0 2.75004 [ 3.75001] ((5 . 27) (6 . 28) (11 . 30) (13 . 32)) 3.776 {0/2:6} B:0 2.75005 [ 3.75002] ((6 . 28) (11 . 30) (13 . 32) (15 . 33)) 3.958 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.7271 [and 1/min{score2}: 0.5604] [2595, 4982]: Comparing 1isp_A and 1pda, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 25 (12 H + 13 S) secondary structure elements in 1pda, of which 15 satisfy the size requirements. 2.20021 [ 3.00008] ((1 . 1) (2 . 2) (4 . 3) (5 . 5) (14 . 15)) 4.945 {0/2:10} B:0 2.20366 [ 3.00145] ((4 . 1) (5 . 2) (6 . 3) (9 . 6) (13 . 9)) 10.063 {0/5:10} B:0 2.75200 [ 3.75079] ((5 . 11) (7 . 13) (9 . 14) (11 . 18)) 10.215 {0/2:6} B:0 2.75237 [ 3.75093] ((1 . 10) (2 . 11) (4 . 12) (9 . 18)) 10.661 {0/2:6} B:0 2.75544 [ 3.75215] ((1 . 10) (2 . 11) (4 . 12) (7 . 19)) 13.131 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.5453 [and 1/min{score2}: 0.4314] [2595, 4992]: Comparing 1isp_A and 1pf5_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 9 (3 H + 6 S) secondary structure elements in 1pf5_A, of which 8 satisfy the size requirements. 2.75006 [ 2.00015] ((4 . 1) (6 . 3) (9 . 6) (11 . 8)) 4.213 {0/3:6} B:0 2.75085 [ 2.00219] ((1 . 3) (2 . 4) (5 . 7) (6 . 8)) 8.240 {0/2:6} B:0 3.66858 [ 3.43941] ((9 . 1) (11 . 2) (14 . 4) (15 . 7)) 13.330 {1/3:6} B:0 5.11089 [ 5.03195] ((2 . 4) (4 . 6) (5 . 7) (6 . 9)) 9.549 {1/2:6} B:0 10.01428 [10.00401] ((1 . 6) (2 . 7) (4 . 8) (6 . 9)) 6.991 {1/1:6} B:0 SIMILARITY (1/min{score1}): 0.5453 [and 1/min{score2}: 0.7495] [2595, 4998]: Comparing 1isp_A and 1pfv_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 38 (22 H + 16 S) secondary structure elements in 1pfv_A, of which 23 satisfy the size requirements. 1.60201 [ 3.28915] ((1 . 1) (2 . 2) (4 . 3) (5 . 21) (6 . 23) (7 . 24) (9 . 25)) 4.542 {1/12:21} B:0 2.20144 [ 4.60016] ((1 . 1) (2 . 2) (4 . 3) (5 . 5) (6 . 6)) 7.958 {0/3:10} B:0 2.50651 [ 4.64067] ((1 . 1) (6 . 23) (9 . 25) (11 . 26) (14 . 28)) 7.377 {1/5:10} B:0 2.75003 [ 5.75000] ((6 . 1) (7 . 2) (11 . 3) (13 . 6)) 3.462 {0/1:6} B:0 2.75005 [ 5.75001] ((4 . 1) (5 . 2) (6 . 3) (11 . 6)) 4.087 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.8644 [and 1/min{score2}: 0.4734] [2595, 5000]: Comparing 1isp_A and 1pfv_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 38 (22 H + 16 S) secondary structure elements in 1pfv_A, of which 9 satisfy the size requirements. NO SIMILARITY! [2595, 5016]: Comparing 1isp_A and 1pi1_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 10 (8 H + 2 S) secondary structure elements in 1pi1_A, of which 8 satisfy the size requirements. 3.66728 [ 3.43784] ((2 . 2) (7 . 5) (14 . 8) (15 . 10)) 11.026 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.2727 [and 1/min{score2}: 0.2909] [2595, 5029]: Comparing 1isp_A and 1pjq_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 38 (19 H + 19 S) secondary structure elements in 1pjq_A, of which 10 satisfy the size requirements. 2.20002 [ 2.00003] ((1 . 2) (2 . 3) (4 . 4) (6 . 8) (9 . 10)) 2.729 {0/3:10} B:0 2.20002 [ 2.00003] ((1 . 2) (4 . 4) (6 . 8) (7 . 9) (9 . 10)) 2.866 {0/3:10} B:0 2.20003 [ 2.00004] ((1 . 2) (5 . 7) (6 . 8) (7 . 9) (9 . 10)) 3.082 {0/3:10} B:0 2.50581 [ 2.37844] ((2 . 3) (4 . 4) (6 . 8) (7 . 9) (9 . 10)) 3.014 {1/5:10} B:0 2.75047 [ 2.50063] ((2 . 3) (4 . 4) (6 . 6) (9 . 10)) 7.133 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.7268 [and 1/min{score2}: 0.7993] [2595, 5036]: Comparing 1isp_A and 1pk6_C, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 10 (0 H + 10 S) secondary structure elements in 1pk6_C, of which 9 satisfy the size requirements. 2.75036 [ 2.25065] ((6 . 1) (9 . 2) (11 . 5) (13 . 7)) 6.645 {0/1:6} B:0 2.75055 [ 2.25100] ((1 . 4) (4 . 6) (6 . 9) (9 . 10)) 7.390 {0/1:6} B:0 2.75094 [ 2.25172] ((4 . 2) (6 . 6) (9 . 8) (11 . 10)) 8.468 {0/3:6} B:0 2.75207 [ 2.25377] ((6 . 4) (9 . 6) (11 . 8) (13 . 9)) 10.309 {0/0:6} B:0 3.66683 [ 3.49510] ((4 . 2) (6 . 7) (9 . 8) (11 . 10)) 9.750 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.3752 [and 1/min{score2}: 0.4443] [2595, 5038]: Comparing 1isp_A and 1pkl_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 45 (23 H + 22 S) secondary structure elements in 1pkl_A, of which 9 satisfy the size requirements. 2.75091 [ 2.25166] ((1 . 12) (2 . 13) (4 . 15) (6 . 18)) 8.393 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.3635 [and 1/min{score2}: 0.4441] [2595, 5039]: Comparing 1isp_A and 1pkl_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 45 (23 H + 22 S) secondary structure elements in 1pkl_A, of which 10 satisfy the size requirements. 1.83434 [ 1.66800] ((2 . 36) (4 . 37) (5 . 38) (6 . 39) (7 . 40) (9 . 41)) 6.346 {0/6:15} B:0 2.20002 [ 2.00002] ((1 . 37) (2 . 38) (4 . 39) (5 . 43) (6 . 44)) 2.689 {0/5:10} B:0 2.20004 [ 2.00006] ((1 . 37) (2 . 38) (4 . 41) (5 . 43) (6 . 44)) 3.331 {0/5:10} B:0 2.20008 [ 2.00011] ((1 . 39) (2 . 40) (4 . 41) (5 . 43) (6 . 44)) 3.889 {0/4:10} B:0 2.20010 [ 2.00014] ((1 . 37) (2 . 40) (4 . 41) (5 . 43) (6 . 44)) 4.102 {0/5:10} B:0 SIMILARITY (1/min{score1}): 0.7263 [and 1/min{score2}: 0.7985] [2595, 5044]: Comparing 1isp_A and 1pl7_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 33 (13 H + 20 S) secondary structure elements in 1pl7_A, of which 12 satisfy the size requirements. 5.11090 [ 5.15492] ((4 . 2) (5 . 4) (11 . 14) (13 . 16)) 9.664 {2/4:6} B:0 SIMILARITY (1/min{score1}): 0.1957 [and 1/min{score2}: 0.1940] [2595, 5046]: Comparing 1isp_A and 1plc, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 10 (2 H + 8 S) secondary structure elements in 1plc, of which 7 satisfy the size requirements. 2.75033 [ 1.75129] ((1 . 1) (4 . 4) (7 . 9) (9 . 10)) 6.527 {0/2:6} B:0 3.66622 [ 3.39502] ((1 . 1) (4 . 4) (6 . 8) (7 . 9)) 5.770 {1/3:6} B:0 2.75014 [ 1.75054] ((1 . 1) (4 . 4) (7 . 9) (9 . 8)) 5.245 {0/2:6} B:1 2.75037 [ 1.75144] ((4 . 1) (6 . 10) (7 . 9) (9 . 8)) 6.712 {0/2:6} B:2 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.5713] [2595, 5053]: Comparing 1isp_A and 1pma_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 17 (7 H + 10 S) secondary structure elements in 1pma_A, of which 15 satisfy the size requirements. 2.75335 [ 3.75132] ((5 . 8) (7 . 13) (11 . 15) (14 . 17)) 11.635 {0/4:6} B:0 3.13251 [ 3.92300] ((1 . 2) (4 . 5) (7 . 8) (11 . 11)) 6.853 {1/4:6} B:0 3.13259 [ 3.92304] ((1 . 9) (5 . 14) (6 . 15) (7 . 17)) 7.292 {1/4:6} B:0 3.66631 [ 4.23360] ((1 . 2) (4 . 5) (7 . 8) (15 . 14)) 6.937 {1/3:6} B:0 3.66672 [ 4.23386] ((5 . 1) (9 . 5) (11 . 6) (14 . 8)) 9.322 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.2954] [2595, 5065]: Comparing 1isp_A and 1pne, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 12 (5 H + 7 S) secondary structure elements in 1pne, of which 11 satisfy the size requirements. 2.75023 [ 2.75023] ((2 . 1) (4 . 2) (9 . 8) (11 . 10)) 5.975 {0/3:6} B:0 2.75032 [ 2.75032] ((2 . 1) (4 . 2) (7 . 6) (9 . 8)) 6.468 {0/4:6} B:0 2.75051 [ 2.75051] ((1 . 3) (2 . 5) (6 . 9) (9 . 11)) 7.276 {0/4:6} B:0 3.13259 [ 3.13259] ((1 . 3) (2 . 5) (6 . 10) (7 . 12)) 7.287 {1/4:6} B:0 3.66632 [ 3.66632] ((1 . 2) (2 . 5) (6 . 9) (9 . 11)) 7.023 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.3636] [2595, 5068]: Comparing 1isp_A and 1poi_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 29 (16 H + 13 S) secondary structure elements in 1poi_A, of which 22 satisfy the size requirements. 2.36320 [ 4.42261] ((1 . 4) (4 . 7) (7 . 11) (13 . 17) (15 . 19)) 7.456 {1/6:10} B:0 2.44510 [ 3.78481] ((4 . 2) (6 . 4) (7 . 6) (9 . 7) (11 . 10) (14 . 14)) 7.893 {2/9:15} B:0 2.75020 [ 5.50002] ((6 . 17) (7 . 19) (9 . 20) (11 . 24)) 5.731 {0/1:6} B:0 2.75065 [ 5.50008] ((2 . 19) (4 . 20) (5 . 21) (6 . 24)) 7.715 {0/4:6} B:0 2.92496 [ 5.52389] ((1 . 4) (2 . 6) (11 . 17) (13 . 20)) 3.925 {1/5:6} B:0 SIMILARITY (1/min{score1}): 0.8601 [and 1/min{score2}: 0.4528] [2595, 5069]: Comparing 1isp_A and 1poi_B, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 22 (8 H + 14 S) secondary structure elements in 1poi_B, of which 19 satisfy the size requirements. 2.20005 [ 3.80001] ((1 . 2) (2 . 3) (4 . 4) (9 . 9) (11 . 15)) 3.449 {0/5:10} B:0 2.20005 [ 3.80001] ((1 . 2) (2 . 3) (6 . 9) (11 . 15) (13 . 17)) 3.517 {0/6:10} B:0 2.20031 [ 3.80006] ((5 . 1) (6 . 2) (7 . 3) (9 . 4) (11 . 7)) 5.406 {0/4:10} B:0 2.20162 [ 3.80031] ((5 . 1) (6 . 2) (7 . 3) (9 . 4) (13 . 9)) 8.202 {0/3:10} B:0 2.36252 [ 3.83473] ((4 . 2) (6 . 4) (7 . 6) (9 . 7) (14 . 14)) 5.253 {1/6:10} B:0 SIMILARITY (1/min{score1}): 0.6348 [and 1/min{score2}: 0.3708] [2595, 5073]: Comparing 1isp_A and 1pox_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 46 (27 H + 19 S) secondary structure elements in 1pox_A, of which 16 satisfy the size requirements. 1.66192 [ 2.31711] ((4 . 32) (5 . 35) (6 . 36) (7 . 37) (9 . 39) (13 . 42) (15 . 43)) 4.541 {1/9:21} B:0 2.20012 [ 3.20004] ((1 . 32) (2 . 33) (4 . 34) (11 . 42) (13 . 44)) 4.287 {0/6:10} B:0 2.20020 [ 3.20006] ((4 . 32) (9 . 36) (11 . 39) (13 . 42) (15 . 43)) 4.837 {0/3:10} B:0 2.20047 [ 3.20015] ((1 . 36) (4 . 39) (7 . 41) (9 . 42) (11 . 44)) 6.028 {0/5:10} B:0 2.20183 [ 3.20060] ((1 . 32) (2 . 35) (4 . 36) (11 . 42) (13 . 44)) 8.457 {0/6:10} B:0 SIMILARITY (1/min{score1}): 0.9483 [and 1/min{score2}: 0.6787] [2595, 5080]: Comparing 1isp_A and 1pqm_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 14 (11 H + 3 S) secondary structure elements in 1pqm_A, of which 13 satisfy the size requirements. 6.06534 [ 6.12536] ((1 . 3) (2 . 5) (5 . 6) (7 . 9)) 10.535 {3/5:6} B:0 SIMILARITY (1/min{score1}): 0.1649 [and 1/min{score2}: 0.1633] [2595, 5083]: Comparing 1isp_A and 1pre_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 37 (13 H + 24 S) secondary structure elements in 1pre_A, of which 8 satisfy the size requirements. 2.75210 [ 2.00545] ((2 . 3) (5 . 4) (6 . 8) (9 . 9)) 10.352 {0/4:6} B:0 2.75143 [ 2.00370] ((2 . 3) (4 . 5) (5 . 4) (6 . 9)) 9.394 {0/4:6} B:1 3.13378 [ 2.72639] ((5 . 3) (6 . 5) (7 . 4) (9 . 9)) 10.563 {1/4:6} B:1 5.11073 [ 5.03177] ((1 . 8) (6 . 6) (9 . 1) (11 . 2)) 7.099 {1/2:6} B:2 3.48141 [ 3.37682] ((1 . 8) (6 . 6) (9 . 5) (13 . 1) (15 . 3)) 5.760 {1/3:10} B:3 SIMILARITY (1/min{score1}): 0.3634 [and 1/min{score2}: 0.4991] [2595, 5092]: Comparing 1isp_A and 1ps1_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 19 (19 H + 0 S) secondary structure elements in 1ps1_A, of which 17 satisfy the size requirements. NO SIMILARITY! [2595, 5101]: Comparing 1isp_A and 1psw_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 28 (16 H + 12 S) secondary structure elements in 1psw_A, of which 25 satisfy the size requirements. 1.57158 [ 3.57144] ((1 . 1) (2 . 2) (4 . 3) (5 . 6) (6 . 7) (9 . 9) (11 . 10)) 3.502 {0/10:21} B:0 1.57271 [ 3.57154] ((1 . 15) (4 . 18) (5 . 19) (9 . 23) (11 . 25) (13 . 26) (15 . 28)) 6.015 {0/10:21} B:0 1.83338 [ 4.16667] ((1 . 15) (2 . 17) (4 . 18) (9 . 23) (11 . 26) (15 . 28)) 3.009 {0/7:15} B:0 1.83419 [ 4.16674] ((1 . 1) (2 . 2) (4 . 3) (6 . 5) (9 . 9) (11 . 10)) 6.105 {0/8:15} B:0 1.83426 [ 4.16675] ((1 . 15) (2 . 17) (4 . 18) (6 . 21) (9 . 25) (11 . 26)) 6.225 {0/5:15} B:0 SIMILARITY (1/min{score1}): 0.9462 [and 1/min{score2}: 0.4390] [2595, 5103]: Comparing 1isp_A and 1psz_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 20 (12 H + 8 S) secondary structure elements in 1psz_A, of which 18 satisfy the size requirements. 1.37535 [ 2.25008] ((1 . 13) (2 . 14) (4 . 15) (5 . 16) (6 . 17) (7 . 18) (9 . 19) (15 . 20)) 3.943 {0/15:28} B:0 1.99813 [ 2.48274] ((1 . 2) (2 . 3) (4 . 4) (5 . 5) (6 . 6) (7 . 7) (9 . 9) (15 . 11)) 4.501 {3/16:28} B:0 2.20013 [ 3.60003] ((4 . 13) (5 . 16) (6 . 17) (7 . 18) (9 . 19)) 4.338 {0/6:10} B:0 2.20074 [ 3.60017] ((5 . 3) (6 . 4) (9 . 6) (11 . 9) (15 . 11)) 6.743 {0/3:10} B:0 2.20076 [ 3.60017] ((1 . 13) (2 . 14) (4 . 15) (5 . 18) (7 . 20)) 6.789 {0/4:10} B:0 SIMILARITY (1/min{score1}): 0.7271 [and 1/min{score2}: 0.4444] [2595, 5121]: Comparing 1isp_A and 1pv9_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 31 (12 H + 19 S) secondary structure elements in 1pv9_A, of which 16 satisfy the size requirements. 2.75018 [ 4.00006] ((2 . 14) (4 . 16) (6 . 21) (7 . 22)) 5.630 {0/3:6} B:0 2.75048 [ 4.00016] ((5 . 14) (6 . 16) (7 . 17) (11 . 21)) 7.158 {0/3:6} B:0 3.13487 [ 4.14570] ((1 . 21) (5 . 23) (9 . 29) (11 . 31)) 12.071 {1/4:6} B:0 3.66620 [ 4.41361] ((2 . 14) (4 . 16) (5 . 17) (9 . 21)) 5.406 {1/3:6} B:0 5.11079 [ 5.44820] ((5 . 13) (9 . 16) (11 . 21) (14 . 22)) 8.324 {1/2:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.2572] [2595, 5132]: Comparing 1isp_A and 1pvo_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 35 (20 H + 15 S) secondary structure elements in 1pvo_A, of which 18 satisfy the size requirements. 1.83363 [ 3.00007] ((1 . 18) (2 . 19) (4 . 20) (6 . 22) (11 . 26) (13 . 28)) 4.678 {0/7:15} B:0 1.83367 [ 3.00008] ((1 . 18) (2 . 19) (4 . 20) (6 . 22) (9 . 26) (11 . 28)) 4.828 {0/6:15} B:0 2.20027 [ 3.60006] ((4 . 20) (5 . 21) (6 . 22) (11 . 26) (13 . 28)) 5.251 {0/5:10} B:0 2.20029 [ 3.60007] ((1 . 18) (2 . 19) (7 . 24) (9 . 26) (11 . 28)) 5.316 {0/3:10} B:0 2.20135 [ 3.60031] ((2 . 14) (6 . 18) (7 . 19) (9 . 20) (11 . 22)) 7.841 {0/4:10} B:0 SIMILARITY (1/min{score1}): 0.8963 [and 1/min{score2}: 0.5544] [2595, 5134]: Comparing 1isp_A and 1pvy_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 20 (12 H + 8 S) secondary structure elements in 1pvy_A, of which 19 satisfy the size requirements. 2.75005 [ 4.75001] ((4 . 3) (5 . 5) (6 . 6) (14 . 15)) 4.088 {0/3:6} B:0 2.75024 [ 4.75005] ((7 . 1) (9 . 2) (11 . 3) (13 . 6)) 6.040 {0/0:6} B:0 2.75083 [ 4.75016] ((7 . 7) (11 . 10) (14 . 11) (15 . 12)) 8.191 {0/2:6} B:0 2.75140 [ 4.75027] ((11 . 3) (13 . 6) (14 . 7) (15 . 8)) 9.341 {0/3:6} B:0 2.75213 [ 4.75041] ((2 . 11) (5 . 16) (6 . 17) (9 . 19)) 10.387 {0/5:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.2521] [2595, 5145]: Comparing 1isp_A and 1pxw_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 11 (7 H + 4 S) secondary structure elements in 1pxw_A, of which 9 satisfy the size requirements. 2.75004 [ 2.25008] ((6 . 3) (7 . 4) (9 . 5) (11 . 8)) 3.945 {0/1:6} B:0 2.75073 [ 2.25132] ((1 . 5) (2 . 7) (4 . 8) (7 . 11)) 7.932 {0/3:6} B:0 2.75082 [ 2.25149] ((2 . 4) (5 . 7) (6 . 10) (7 . 11)) 8.167 {0/4:6} B:0 2.92570 [ 2.54126] ((2 . 4) (5 . 9) (6 . 10) (7 . 11)) 8.434 {1/5:6} B:0 3.13337 [ 2.83756] ((2 . 7) (5 . 9) (6 . 10) (7 . 11)) 9.774 {1/4:6} B:0 SIMILARITY (1/min{score1}): 0.4544 [and 1/min{score2}: 0.5552] [2595, 5167]: Comparing 1isp_A and 1q0p_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 14 (8 H + 6 S) secondary structure elements in 1q0p_A, of which 12 satisfy the size requirements. 1.83346 [ 2.00010] ((1 . 1) (2 . 2) (4 . 3) (5 . 7) (6 . 9) (9 . 12)) 3.808 {0/3:15} B:0 2.20013 [ 2.40010] ((1 . 3) (5 . 7) (6 . 9) (11 . 12) (13 . 14)) 4.396 {0/5:10} B:0 2.20014 [ 2.40011] ((1 . 9) (5 . 10) (6 . 12) (7 . 13) (9 . 14)) 4.429 {0/2:10} B:0 2.20100 [ 2.40077] ((2 . 7) (4 . 9) (5 . 10) (9 . 12) (11 . 14)) 7.267 {0/4:10} B:0 2.20125 [ 2.40096] ((2 . 7) (4 . 9) (5 . 10) (6 . 12) (9 . 14)) 7.690 {0/4:10} B:0 SIMILARITY (1/min{score1}): 0.7260 [and 1/min{score2}: 0.6659] [2595, 5176]: Comparing 1isp_A and 1q16_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 93 (53 H + 40 S) secondary structure elements in 1q16_A, of which 8 satisfy the size requirements. 2.75238 [ 2.00616] ((4 . 82) (5 . 83) (9 . 86) (11 . 88)) 10.673 {0/4:6} B:0 3.13259 [ 2.72458] ((1 . 84) (2 . 85) (4 . 87) (9 . 91)) 7.308 {1/4:6} B:0 3.66673 [ 3.43717] ((9 . 82) (11 . 84) (13 . 86) (14 . 85)) 9.369 {1/3:6} B:1 10.01428 [10.00401] ((6 . 84) (9 . 88) (11 . 82) (14 . 85)) 7.205 {3/3:6} B:1 4.08880 [ 4.02564] ((1 . 84) (5 . 83) (6 . 87) (9 . 86) (11 . 91)) 8.359 {2/5:10} B:2 SIMILARITY (1/min{score1}): 0.3989 [and 1/min{score2}: 0.4985] [2595, 5183]: Comparing 1isp_A and 1q1r_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 41 (15 H + 26 S) secondary structure elements in 1q1r_A, of which 8 satisfy the size requirements. 2.75055 [ 2.00143] ((9 . 34) (11 . 36) (13 . 38) (15 . 39)) 7.397 {0/0:6} B:0 2.75145 [ 2.00377] ((9 . 34) (11 . 37) (13 . 38) (15 . 40)) 9.439 {0/0:6} B:0 2.75156 [ 2.00404] ((9 . 34) (11 . 36) (13 . 38) (14 . 39)) 9.599 {0/0:6} B:0 2.75157 [ 2.00407] ((6 . 34) (9 . 36) (11 . 38) (15 . 41)) 9.618 {0/0:6} B:0 2.75266 [ 2.00688] ((6 . 34) (9 . 36) (11 . 38) (14 . 41)) 10.975 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.4542 [and 1/min{score2}: 0.6236] [2595, 5192]: Comparing 1isp_A and 1q35_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 27 (18 H + 9 S) secondary structure elements in 1q35_A, of which 23 satisfy the size requirements. 2.75045 [ 5.75005] ((1 . 1) (2 . 2) (4 . 3) (5 . 6)) 7.048 {0/1:6} B:0 2.75089 [ 5.75010] ((5 . 16) (7 . 18) (9 . 20) (14 . 23)) 8.343 {0/4:6} B:0 2.75123 [ 5.75013] ((2 . 13) (6 . 17) (7 . 19) (9 . 21)) 9.047 {0/3:6} B:0 3.13255 [ 5.80074] ((2 . 13) (6 . 17) (7 . 19) (14 . 25)) 7.102 {1/4:6} B:0 3.13262 [ 5.80075] ((5 . 16) (7 . 18) (9 . 20) (14 . 25)) 7.434 {1/4:6} B:0 SIMILARITY (1/min{score1}): 0.5177 [and 1/min{score2}: 0.2994] [2595, 5198]: Comparing 1isp_A and 1q3q_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 44 (21 H + 23 S) secondary structure elements in 1q3q_A, of which 11 satisfy the size requirements. 2.20102 [ 2.20102] ((4 . 21) (5 . 23) (6 . 24) (7 . 25) (9 . 26)) 7.298 {0/4:10} B:0 3.13230 [ 3.13230] ((6 . 21) (11 . 24) (13 . 26) (14 . 27)) 4.794 {1/4:6} B:0 6.71441 [ 6.71441] ((9 . 21) (11 . 24) (13 . 26) (14 . 27)) 4.640 {2/3:6} B:0 1.79146 [ 1.79146] ((5 . 23) (6 . 24) (7 . 25) (9 . 26) (11 . 31) (13 . 32) (15 . 27)) 7.021 {1/7:21} B:1 1.83395 [ 1.83395] ((6 . 24) (7 . 25) (9 . 26) (11 . 31) (13 . 32) (15 . 27)) 5.612 {0/1:15} B:1 SIMILARITY (1/min{score1}): 0.5582 [and 1/min{score2}: 0.5582] [2595, 5199]: Comparing 1isp_A and 1q40_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 10 (3 H + 7 S) secondary structure elements in 1q40_A, of which 8 satisfy the size requirements. 5.11091 [ 5.03197] ((2 . 2) (6 . 7) (11 . 9) (13 . 10)) 9.734 {2/4:6} B:0 3.66654 [ 3.43694] ((9 . 8) (11 . 9) (13 . 7) (14 . 1)) 8.483 {1/3:6} B:2 SIMILARITY (1/min{score1}): 0.2727 [and 1/min{score2}: 0.2910] [2595, 5209]: Comparing 1isp_A and 1q4t_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 10 (4 H + 6 S) secondary structure elements in 1q4t_A, of which 8 satisfy the size requirements. 2.75043 [ 2.00112] ((4 . 4) (5 . 6) (6 . 7) (9 . 9)) 6.963 {0/3:6} B:0 2.75068 [ 2.00177] ((1 . 4) (2 . 6) (4 . 7) (6 . 9)) 7.805 {0/3:6} B:0 2.75118 [ 2.00307] ((5 . 2) (6 . 4) (11 . 7) (13 . 9)) 8.960 {0/3:6} B:0 2.75140 [ 2.00364] ((5 . 2) (6 . 4) (9 . 7) (13 . 9)) 9.355 {0/3:6} B:0 3.66643 [ 3.43681] ((2 . 6) (4 . 7) (6 . 9) (9 . 10)) 7.850 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.4997] [2595, 5212]: Comparing 1isp_A and 1q5d_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 31 (19 H + 12 S) secondary structure elements in 1q5d_A, of which 25 satisfy the size requirements. 2.92656 [ 6.26649] ((2 . 8) (5 . 10) (14 . 15) (15 . 16)) 10.180 {1/5:6} B:0 4.20924 [ 6.49776] ((2 . 15) (5 . 17) (11 . 21) (14 . 25)) 14.760 {2/5:6} B:0 5.11118 [ 6.81033] ((2 . 13) (5 . 15) (7 . 16) (14 . 20)) 11.642 {2/4:6} B:0 6.06530 [ 7.28854] ((2 . 10) (5 . 13) (7 . 14) (15 . 18)) 10.058 {3/5:6} B:0 2.92567 [ 6.26640] ((2 . 10) (5 . 15) (7 . 14) (11 . 30)) 8.348 {1/5:6} B:1 SIMILARITY (1/min{score1}): 0.4543 [and 1/min{score2}: 0.2369] [2595, 5215]: Comparing 1isp_A and 1q5q_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 17 (7 H + 10 S) secondary structure elements in 1q5q_A, of which 16 satisfy the size requirements. 2.75017 [ 4.00005] ((4 . 4) (7 . 8) (9 . 9) (15 . 14)) 5.503 {0/3:6} B:0 2.75047 [ 4.00015] ((1 . 2) (4 . 4) (7 . 8) (15 . 14)) 7.117 {0/3:6} B:0 3.13262 [ 4.14473] ((1 . 9) (5 . 14) (6 . 15) (7 . 17)) 7.443 {1/4:6} B:0 3.13404 [ 4.14534] ((2 . 1) (7 . 6) (11 . 10) (14 . 13)) 10.976 {1/4:6} B:0 3.66618 [ 4.41360] ((4 . 4) (7 . 8) (9 . 9) (11 . 10)) 4.905 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.5432 [and 1/min{score2}: 0.3747] [2595, 5223]: Comparing 1isp_A and 1q6o_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 19 (11 H + 8 S) secondary structure elements in 1q6o_A, of which 19 satisfy the size requirements. 1.83353 [ 3.16670] ((4 . 1) (5 . 2) (6 . 3) (9 . 6) (11 . 8) (13 . 10)) 4.204 {0/7:15} B:0 1.83374 [ 3.16675] ((4 . 8) (5 . 9) (6 . 10) (9 . 12) (11 . 15) (13 . 17)) 5.074 {0/9:15} B:0 1.83390 [ 3.16678] ((1 . 6) (4 . 8) (5 . 9) (6 . 12) (9 . 15) (11 . 17)) 5.492 {0/8:15} B:0 1.83390 [ 3.16678] ((2 . 9) (4 . 10) (5 . 11) (6 . 12) (9 . 15) (11 . 17)) 5.494 {0/8:15} B:0 1.83414 [ 3.16682] ((1 . 8) (2 . 9) (4 . 10) (5 . 11) (6 . 12) (9 . 15)) 6.003 {0/6:15} B:0 SIMILARITY (1/min{score1}): 0.9062 [and 1/min{score2}: 0.5261] [2595, 5231]: Comparing 1isp_A and 1q7h_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 17 (6 H + 11 S) secondary structure elements in 1q7h_A, of which 8 satisfy the size requirements. 2.75074 [ 2.00193] ((6 . 8) (7 . 9) (9 . 13) (11 . 16)) 7.975 {0/1:6} B:0 3.13270 [ 2.72475] ((6 . 8) (7 . 9) (11 . 14) (14 . 17)) 7.825 {1/4:6} B:0 6.71443 [ 6.68015] ((7 . 9) (9 . 13) (11 . 14) (14 . 17)) 6.330 {2/3:6} B:0 SIMILARITY (1/min{score1}): 0.3635 [and 1/min{score2}: 0.4995] [2595, 5266]: Comparing 1isp_A and 1qam_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 19 (12 H + 7 S) secondary structure elements in 1qam_A, of which 16 satisfy the size requirements. 1.83339 [ 2.66669] ((1 . 2) (2 . 3) (4 . 4) (6 . 8) (9 . 10) (11 . 13)) 3.151 {0/5:15} B:0 2.20004 [ 3.20001] ((4 . 2) (5 . 3) (6 . 4) (7 . 5) (9 . 6)) 3.246 {0/4:10} B:0 2.20010 [ 3.20003] ((1 . 2) (2 . 5) (4 . 6) (7 . 9) (9 . 10)) 4.116 {0/5:10} B:0 2.20020 [ 3.20006] ((5 . 1) (6 . 2) (7 . 3) (9 . 4) (11 . 6)) 4.855 {0/4:10} B:0 2.20024 [ 3.20008] ((5 . 1) (6 . 2) (9 . 4) (11 . 6) (14 . 9)) 5.065 {0/5:10} B:0 SIMILARITY (1/min{score1}): 0.8176 [and 1/min{score2}: 0.5700] [2595, 5278]: Comparing 1isp_A and 1qba, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 70 (33 H + 37 S) secondary structure elements in 1qba, of which 11 satisfy the size requirements. 2.75164 [ 2.75164] ((1 . 2) (4 . 5) (6 . 9) (9 . 10)) 9.721 {0/2:6} B:0 6.71444 [ 6.71444] ((2 . 1) (9 . 6) (11 . 9) (13 . 10)) 7.037 {2/3:6} B:0 3.48134 [ 3.48134] ((1 . 12) (2 . 1) (9 . 6) (11 . 9) (13 . 7)) 4.187 {2/6:10} B:2 5.02247 [ 5.02247] ((1 . 12) (2 . 1) (6 . 6) (9 . 9) (11 . 8) (13 . 7)) 5.468 {4/8:15} B:3 SIMILARITY (1/min{score1}): 0.3634 [and 1/min{score2}: 0.3634] [2595, 5285]: Comparing 1isp_A and 1qc7_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 6 (6 H + 0 S) secondary structure elements in 1qc7_A, of which 6 satisfy the size requirements. NO SIMILARITY! [2595, 5307]: Comparing 1isp_A and 1qf6_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 59 (24 H + 35 S) secondary structure elements in 1qf6_A, of which 9 satisfy the size requirements. 1.83339 [ 1.50010] ((1 . 51) (2 . 52) (4 . 53) (5 . 54) (6 . 55) (9 . 58)) 3.082 {0/6:15} B:0 2.20106 [ 1.80194] ((1 . 51) (2 . 52) (4 . 53) (5 . 54) (7 . 59)) 7.383 {0/2:10} B:0 2.75011 [ 2.25020] ((1 . 51) (2 . 52) (4 . 55) (6 . 58)) 4.924 {0/2:6} B:0 2.75021 [ 2.25038] ((1 . 53) (2 . 54) (4 . 55) (5 . 59)) 5.817 {0/0:6} B:0 2.75038 [ 2.25069] ((9 . 51) (11 . 53) (13 . 55) (15 . 59)) 6.731 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.5454 [and 1/min{score2}: 0.6666] [2595, 5312]: Comparing 1isp_A and 1qfj_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 20 (8 H + 12 S) secondary structure elements in 1qfj_A, of which 7 satisfy the size requirements. 5.11081 [ 5.01881] ((1 . 1) (4 . 3) (6 . 7) (7 . 6)) 8.537 {2/4:6} B:1 SIMILARITY (1/min{score1}): 0.1957 [and 1/min{score2}: 0.1993] [2595, 5318]: Comparing 1isp_A and 1qfx_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 28 (20 H + 8 S) secondary structure elements in 1qfx_A, of which 22 satisfy the size requirements. 2.75001 [ 5.50000] ((5 . 7) (6 . 8) (7 . 9) (9 . 11)) 2.612 {0/3:6} B:0 2.75022 [ 5.50003] ((1 . 3) (7 . 7) (9 . 8) (11 . 11)) 5.865 {0/2:6} B:0 2.75044 [ 5.50005] ((1 . 8) (2 . 9) (4 . 11) (14 . 17)) 6.979 {0/0:6} B:0 2.75092 [ 5.50012] ((2 . 7) (4 . 8) (5 . 9) (6 . 11)) 8.425 {0/2:6} B:0 2.75311 [ 5.50039] ((1 . 3) (5 . 6) (9 . 8) (11 . 11)) 11.420 {0/4:6} B:0 SIMILARITY (1/min{score1}): 0.5450 [and 1/min{score2}: 0.3144] [2595, 5323]: Comparing 1isp_A and 1qgi_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 19 (14 H + 5 S) secondary structure elements in 1qgi_A, of which 15 satisfy the size requirements. NO SIMILARITY! [2595, 5324]: Comparing 1isp_A and 1qgn_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 29 (17 H + 12 S) secondary structure elements in 1qgn_A, of which 27 satisfy the size requirements. 2.08835 [ 4.52104] ((2 . 6) (4 . 7) (5 . 11) (6 . 12) (9 . 14) (11 . 15)) 4.654 {1/6:15} B:0 2.20014 [ 5.40001] ((1 . 7) (4 . 10) (5 . 13) (6 . 14) (9 . 15)) 4.444 {0/4:10} B:0 2.20017 [ 5.40001] ((4 . 7) (6 . 12) (7 . 13) (9 . 14) (11 . 15)) 4.689 {0/2:10} B:0 2.20018 [ 5.40001] ((1 . 7) (4 . 12) (5 . 13) (6 . 14) (9 . 15)) 4.723 {0/3:10} B:0 2.20033 [ 5.40002] ((5 . 6) (6 . 7) (7 . 8) (9 . 10) (14 . 13)) 5.525 {0/3:10} B:0 SIMILARITY (1/min{score1}): 0.8174 [and 1/min{score2}: 0.3333] [2595, 5344]: Comparing 1isp_A and 1qhq_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 10 (2 H + 8 S) secondary structure elements in 1qhq_A, of which 10 satisfy the size requirements. 2.75054 [ 2.50072] ((1 . 2) (4 . 4) (5 . 5) (11 . 10)) 7.365 {0/2:6} B:0 3.13242 [ 2.97323] ((1 . 4) (2 . 5) (6 . 9) (9 . 10)) 6.182 {1/4:6} B:0 3.66626 [ 3.57061] ((4 . 4) (5 . 5) (6 . 7) (11 . 10)) 6.290 {1/3:6} B:0 5.11068 [ 5.07638] ((4 . 4) (5 . 5) (9 . 9) (11 . 10)) 5.315 {2/4:6} B:0 5.11073 [ 5.07644] ((2 . 5) (4 . 7) (6 . 9) (9 . 10)) 7.202 {2/4:6} B:0 SIMILARITY (1/min{score1}): 0.5042 [and 1/min{score2}: 0.5385] [2595, 5345]: Comparing 1isp_A and 1qhu_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 43 (10 H + 33 S) secondary structure elements in 1qhu_A, of which 15 satisfy the size requirements. 2.75007 [ 3.75003] ((1 . 7) (4 . 9) (9 . 16) (11 . 18)) 4.418 {0/2:6} B:0 2.75011 [ 3.75004] ((6 . 2) (9 . 3) (11 . 7) (13 . 9)) 4.968 {0/0:6} B:0 2.75030 [ 3.75012] ((6 . 2) (9 . 4) (11 . 7) (13 . 9)) 6.351 {0/0:6} B:0 2.75045 [ 3.75018] ((6 . 12) (9 . 13) (11 . 17) (13 . 18)) 7.047 {0/1:6} B:0 2.75069 [ 3.75027] ((1 . 7) (4 . 9) (6 . 14) (11 . 18)) 7.841 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.2801] [2595, 5368]: Comparing 1isp_A and 1qks_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 50 (15 H + 35 S) secondary structure elements in 1qks_A, of which 35 satisfy the size requirements. 2.20012 [ 7.00000] ((4 . 12) (6 . 16) (9 . 18) (11 . 20) (13 . 22)) 4.244 {0/3:10} B:0 2.20021 [ 7.00001] ((4 . 26) (6 . 30) (9 . 33) (11 . 35) (13 . 37)) 4.918 {0/4:10} B:0 2.75009 [ 8.75000] ((6 . 16) (9 . 18) (11 . 21) (13 . 22)) 4.711 {0/1:6} B:0 2.75013 [ 8.75000] ((6 . 35) (9 . 37) (11 . 39) (13 . 43)) 5.177 {0/1:6} B:0 2.75014 [ 8.75000] ((6 . 20) (9 . 22) (11 . 26) (13 . 28)) 5.255 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.5453 [and 1/min{score2}: 0.1989] [2595, 5378]: Comparing 1isp_A and 1qlt_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 44 (25 H + 19 S) secondary structure elements in 1qlt_A, of which 14 satisfy the size requirements. 2.75010 [ 3.50005] ((4 . 4) (5 . 5) (6 . 6) (9 . 7)) 4.779 {0/1:6} B:0 2.75108 [ 3.50052] ((7 . 1) (11 . 3) (13 . 4) (15 . 5)) 8.756 {0/0:6} B:0 2.75231 [ 3.50112] ((7 . 5) (9 . 6) (11 . 7) (15 . 10)) 10.600 {0/0:6} B:0 2.75496 [ 3.50241] ((1 . 7) (5 . 13) (9 . 16) (13 . 21)) 12.833 {0/4:6} B:0 5.11078 [ 5.27647] ((7 . 5) (9 . 6) (13 . 9) (14 . 10)) 8.099 {1/2:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.2910] [2595, 5411]: Comparing 1isp_A and 1qpo_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 23 (11 H + 12 S) secondary structure elements in 1qpo_A, of which 7 satisfy the size requirements. 2.75025 [ 1.75096] ((5 . 1) (6 . 3) (7 . 5) (9 . 6)) 6.062 {0/3:6} B:0 2.75098 [ 1.75378] ((2 . 2) (4 . 3) (5 . 5) (6 . 6)) 8.543 {0/3:6} B:0 2.75292 [ 1.76126] ((1 . 6) (2 . 5) (4 . 8) (5 . 9)) 11.242 {0/0:6} B:1 2.81189 [ 2.55974] ((5 . 1) (6 . 8) (7 . 5) (9 . 3) (11 . 6)) 6.542 {1/4:10} B:2 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.5711] [2595, 5414]: Comparing 1isp_A and 1qpx_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 22 (4 H + 18 S) secondary structure elements in 1qpx_A, of which 9 satisfy the size requirements. 5.11068 [ 5.05052] ((4 . 14) (6 . 16) (7 . 17) (9 . 20)) 5.513 {2/4:6} B:0 5.11093 [ 5.05078] ((4 . 14) (5 . 17) (6 . 18) (9 . 21)) 9.932 {2/4:6} B:0 SIMILARITY (1/min{score1}): 0.1957 [and 1/min{score2}: 0.1980] [2595, 5418]: Comparing 1isp_A and 1qqg_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 20 (6 H + 14 S) secondary structure elements in 1qqg_A, of which 9 satisfy the size requirements. 2.75104 [ 2.25190] ((1 . 1) (4 . 3) (5 . 4) (6 . 8)) 8.686 {0/2:6} B:0 5.11068 [ 5.05051] ((9 . 1) (11 . 2) (13 . 3) (14 . 4)) 5.291 {1/2:6} B:0 2.20045 [ 1.80081] ((1 . 2) (4 . 3) (5 . 4) (6 . 1) (14 . 10)) 5.942 {0/2:10} B:1 2.75011 [ 2.25021] ((1 . 2) (4 . 3) (5 . 4) (6 . 1)) 4.997 {0/1:6} B:1 SIMILARITY (1/min{score1}): 0.4545 [and 1/min{score2}: 0.5553] [2595, 5421]: Comparing 1isp_A and 1qqk_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 13 (1 H + 12 S) secondary structure elements in 1qqk_A, of which 6 satisfy the size requirements. NO SIMILARITY! [2595, 5433]: Comparing 1isp_A and 1qre_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 25 (3 H + 22 S) secondary structure elements in 1qre_A, of which 13 satisfy the size requirements. 2.75016 [ 3.25009] ((6 . 4) (9 . 7) (11 . 10) (13 . 14)) 5.406 {0/1:6} B:0 2.75073 [ 3.25044] ((4 . 4) (9 . 12) (11 . 16) (13 . 18)) 7.944 {0/3:6} B:0 3.13288 [ 3.50376] ((4 . 10) (6 . 16) (9 . 18) (14 . 25)) 8.473 {1/4:6} B:0 3.66664 [ 3.91583] ((4 . 10) (6 . 16) (9 . 18) (15 . 25)) 8.973 {1/3:6} B:0 3.66668 [ 3.91586] ((4 . 7) (9 . 16) (11 . 18) (15 . 25)) 9.165 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.4545 [and 1/min{score2}: 0.3846] [2595, 5442]: Comparing 1isp_A and 1qsa_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 40 (40 H + 0 S) secondary structure elements in 1qsa_A, of which 10 satisfy the size requirements. 4.20725 [ 4.14502] ((2 . 32) (5 . 34) (7 . 35) (14 . 40)) 9.630 {2/5:6} B:0 SIMILARITY (1/min{score1}): 0.2377 [and 1/min{score2}: 0.2413] [2595, 5479]: Comparing 1isp_A and 1qwn_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 74 (25 H + 49 S) secondary structure elements in 1qwn_A, of which 35 satisfy the size requirements. 2.75034 [ 8.75001] ((4 . 33) (6 . 34) (9 . 36) (11 . 40)) 6.560 {0/3:6} B:0 2.75050 [ 8.75002] ((1 . 47) (6 . 52) (9 . 54) (13 . 59)) 7.231 {0/3:6} B:0 2.75063 [ 8.75002] ((4 . 44) (9 . 48) (11 . 51) (13 . 53)) 7.656 {0/3:6} B:0 2.75065 [ 8.75002] ((1 . 52) (4 . 54) (11 . 63) (15 . 65)) 7.710 {0/2:6} B:0 2.75076 [ 8.75002] ((1 . 54) (4 . 56) (6 . 61) (11 . 63)) 8.028 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.1912] [2595, 5487]: Comparing 1isp_A and 1qxn_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 13 (6 H + 7 S) secondary structure elements in 1qxn_A, of which 11 satisfy the size requirements. 1.83438 [ 1.83438] ((1 . 2) (4 . 4) (5 . 8) (6 . 9) (7 . 10) (9 . 11)) 6.407 {0/7:15} B:0 1.83440 [ 1.83440] ((1 . 2) (4 . 7) (5 . 8) (6 . 9) (7 . 10) (9 . 11)) 6.451 {0/8:15} B:0 2.75009 [ 2.75009] ((1 . 4) (4 . 9) (5 . 10) (6 . 11)) 4.694 {0/0:6} B:0 2.75010 [ 2.75010] ((1 . 4) (4 . 7) (5 . 10) (6 . 11)) 4.805 {0/1:6} B:0 2.75041 [ 2.75041] ((1 . 4) (2 . 8) (4 . 9) (5 . 10)) 6.873 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.7330 [and 1/min{score2}: 0.7330] [2595, 5489]: Comparing 1isp_A and 1qxr_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 17 (3 H + 14 S) secondary structure elements in 1qxr_A, of which 14 satisfy the size requirements. 2.75018 [ 3.50009] ((6 . 9) (9 . 11) (11 . 13) (13 . 16)) 5.623 {0/0:6} B:0 2.75144 [ 3.50070] ((1 . 6) (4 . 9) (6 . 12) (9 . 14)) 9.412 {0/0:6} B:0 2.75168 [ 3.50082] ((1 . 5) (4 . 6) (6 . 9) (11 . 14)) 9.787 {0/2:6} B:0 2.75172 [ 3.50083] ((1 . 5) (6 . 12) (9 . 14) (11 . 17)) 9.837 {0/2:6} B:0 2.75195 [ 3.50095] ((4 . 2) (5 . 4) (9 . 6) (13 . 13)) 10.160 {0/4:6} B:0 SIMILARITY (1/min{score1}): 0.5451 [and 1/min{score2}: 0.4285] [2595, 5500]: Comparing 1isp_A and 1qz5_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 38 (19 H + 19 S) secondary structure elements in 1qz5_A, of which 11 satisfy the size requirements. 2.75002 [ 2.75002] ((5 . 10) (6 . 12) (7 . 13) (9 . 14)) 3.150 {0/3:6} B:0 2.75005 [ 2.75005] ((1 . 1) (4 . 3) (9 . 12) (11 . 14)) 4.035 {0/3:6} B:0 2.75005 [ 2.75005] ((5 . 10) (6 . 12) (7 . 13) (11 . 14)) 4.120 {0/3:6} B:0 2.75023 [ 2.75023] ((9 . 1) (11 . 3) (13 . 7) (15 . 10)) 5.970 {0/0:6} B:0 2.75036 [ 2.75036] ((2 . 10) (4 . 12) (5 . 13) (6 . 14)) 6.649 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.5629 [and 1/min{score2}: 0.5629] [2595, 5501]: Comparing 1isp_A and 1qz5_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 38 (19 H + 19 S) secondary structure elements in 1qz5_A, of which 18 satisfy the size requirements. 5.11104 [ 5.67235] ((1 . 20) (11 . 30) (14 . 34) (15 . 35)) 10.741 {2/4:6} B:0 5.11219 [ 5.67319] ((1 . 16) (9 . 25) (13 . 30) (15 . 32)) 15.214 {1/2:6} B:0 6.06534 [ 6.42704] ((5 . 28) (6 . 30) (7 . 32) (14 . 38)) 10.564 {3/5:6} B:0 3.66620 [ 4.80607] ((1 . 17) (5 . 28) (6 . 16) (9 . 30)) 5.404 {1/3:6} B:1 3.66681 [ 4.80634] ((2 . 28) (4 . 30) (7 . 21) (15 . 32)) 9.681 {1/3:6} B:1 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.2222] [2595, 5525]: Comparing 1isp_A and 1r1k_D, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 14 (11 H + 3 S) secondary structure elements in 1r1k_D, of which 12 satisfy the size requirements. 5.11082 [ 5.15483] ((2 . 1) (5 . 3) (7 . 10) (15 . 11)) 8.687 {2/4:6} B:0 5.11084 [ 5.15485] ((2 . 1) (5 . 3) (7 . 5) (15 . 11)) 8.962 {2/4:6} B:0 SIMILARITY (1/min{score1}): 0.1957 [and 1/min{score2}: 0.1940] [2595, 5535]: Comparing 1isp_A and 1r2z_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 21 (10 H + 11 S) secondary structure elements in 1r2z_A, of which 12 satisfy the size requirements. 2.75074 [ 3.00057] ((2 . 1) (4 . 2) (5 . 5) (11 . 11)) 7.968 {0/2:6} B:0 3.13345 [ 3.31121] ((2 . 1) (5 . 5) (6 . 7) (11 . 12)) 9.953 {1/4:6} B:0 3.66700 [ 3.78217] ((5 . 1) (7 . 5) (9 . 8) (11 . 10)) 10.284 {1/3:6} B:0 5.11068 [ 5.15470] ((1 . 2) (2 . 5) (6 . 9) (9 . 11)) 5.471 {1/2:6} B:0 5.11071 [ 5.15473] ((2 . 1) (5 . 5) (6 . 8) (9 . 10)) 6.650 {2/4:6} B:0 SIMILARITY (1/min{score1}): 0.4374 [and 1/min{score2}: 0.4204] [2595, 5540]: Comparing 1isp_A and 1r3e_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 30 (9 H + 21 S) secondary structure elements in 1r3e_A, of which 17 satisfy the size requirements. 2.75013 [ 4.25004] ((1 . 6) (4 . 16) (5 . 17) (6 . 18)) 5.173 {0/2:6} B:0 2.75030 [ 4.25008] ((1 . 1) (2 . 2) (4 . 4) (5 . 5)) 6.379 {0/1:6} B:0 2.75127 [ 4.25034] ((2 . 2) (4 . 3) (5 . 5) (13 . 14)) 9.121 {0/3:6} B:0 2.75693 [ 4.25188] ((5 . 5) (7 . 9) (11 . 14) (13 . 16)) 13.953 {0/3:6} B:0 3.66672 [ 4.60533] ((7 . 9) (11 . 14) (13 . 16) (14 . 17)) 9.311 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.2353] [2595, 5557]: Comparing 1isp_A and 1r57_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 8 (3 H + 5 S) secondary structure elements in 1r57_A, of which 8 satisfy the size requirements. 2.75008 [ 2.00021] ((4 . 4) (5 . 5) (6 . 6) (7 . 7)) 4.584 {0/5:6} B:0 2.75303 [ 2.00784] ((9 . 2) (11 . 4) (14 . 5) (15 . 7)) 11.340 {0/1:6} B:0 2.92520 [ 2.37891] ((4 . 4) (5 . 5) (6 . 6) (7 . 8)) 6.478 {1/5:6} B:0 3.66682 [ 3.43728] ((6 . 1) (9 . 3) (11 . 4) (14 . 8)) 9.685 {1/3:6} B:0 2.75041 [ 2.00108] ((6 . 3) (9 . 1) (11 . 2) (15 . 5)) 6.897 {0/0:6} B:1 SIMILARITY (1/min{score1}): 0.3754 [and 1/min{score2}: 0.4999] [2595, 5560]: Comparing 1isp_A and 1r5j_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 24 (14 H + 10 S) secondary structure elements in 1r5j_A, of which 23 satisfy the size requirements. 2.20003 [ 4.60000] ((4 . 13) (5 . 14) (6 . 15) (7 . 16) (9 . 17)) 3.115 {0/6:10} B:0 2.20140 [ 4.60015] ((1 . 13) (2 . 14) (4 . 15) (6 . 17) (11 . 22)) 7.911 {0/5:10} B:0 2.20206 [ 4.60023] ((1 . 17) (2 . 18) (4 . 20) (5 . 21) (6 . 22)) 8.709 {0/4:10} B:0 2.50600 [ 4.64059] ((1 . 15) (2 . 16) (4 . 17) (5 . 19) (7 . 21)) 5.425 {1/5:10} B:0 2.75001 [ 5.75000] ((1 . 2) (2 . 3) (4 . 4) (9 . 9)) 2.965 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.5630 [and 1/min{score2}: 0.4004] [2595, 5562]: Comparing 1isp_A and 1r5l_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 21 (16 H + 5 S) secondary structure elements in 1r5l_A, of which 15 satisfy the size requirements. 1.83359 [ 2.50010] ((4 . 7) (5 . 9) (6 . 11) (9 . 14) (11 . 17) (14 . 18)) 4.509 {0/5:15} B:0 2.20012 [ 3.00005] ((4 . 11) (5 . 13) (6 . 14) (7 . 15) (9 . 17)) 4.240 {0/5:10} B:0 2.20040 [ 3.00016] ((2 . 9) (5 . 13) (6 . 14) (7 . 15) (9 . 17)) 5.768 {0/6:10} B:0 2.20045 [ 3.00018] ((4 . 7) (5 . 9) (6 . 11) (7 . 12) (14 . 18)) 5.947 {0/4:10} B:0 2.20091 [ 3.00036] ((2 . 9) (6 . 11) (7 . 13) (9 . 14) (11 . 17)) 7.098 {0/3:10} B:0 SIMILARITY (1/min{score1}): 0.5454 [and 1/min{score2}: 0.4203] [2595, 5567]: Comparing 1isp_A and 1r61_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 19 (7 H + 12 S) secondary structure elements in 1r61_A, of which 13 satisfy the size requirements. 2.20026 [ 2.60015] ((4 . 8) (5 . 10) (6 . 11) (9 . 15) (11 . 17)) 5.167 {0/6:10} B:0 2.20137 [ 2.60083] ((1 . 8) (2 . 10) (5 . 14) (6 . 15) (9 . 17)) 7.869 {0/7:10} B:0 2.75009 [ 3.25005] ((6 . 8) (9 . 11) (11 . 15) (13 . 17)) 4.646 {0/1:6} B:0 2.75020 [ 3.25012] ((5 . 10) (6 . 11) (11 . 15) (13 . 17)) 5.765 {0/3:6} B:0 2.75032 [ 3.25020] ((9 . 6) (11 . 8) (13 . 11) (15 . 14)) 6.486 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.6354 [and 1/min{score2}: 0.5380] [2595, 5594]: Comparing 1isp_A and 1r8s_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 13 (7 H + 6 S) secondary structure elements in 1r8s_A, of which 12 satisfy the size requirements. 1.58819 [ 1.72725] ((1 . 1) (2 . 2) (5 . 5) (6 . 6) (11 . 9) (13 . 12) (15 . 13)) 4.026 {1/14:21} B:0 1.83344 [ 2.00008] ((1 . 1) (4 . 4) (5 . 5) (6 . 6) (9 . 9) (11 . 12)) 3.592 {0/8:15} B:0 1.83344 [ 2.00008] ((1 . 1) (2 . 2) (6 . 6) (7 . 7) (9 . 9) (11 . 12)) 3.634 {0/8:15} B:0 1.83345 [ 2.00009] ((1 . 1) (2 . 2) (9 . 6) (11 . 9) (13 . 12) (15 . 13)) 3.672 {0/8:15} B:0 1.87275 [ 2.03064] ((1 . 1) (2 . 2) (5 . 5) (6 . 6) (9 . 9) (11 . 12)) 3.844 {1/10:15} B:0 SIMILARITY (1/min{score1}): 0.8095 [and 1/min{score2}: 0.7443] [2595, 5600]: Comparing 1isp_A and 1r9w_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 12 (7 H + 5 S) secondary structure elements in 1r9w_A, of which 10 satisfy the size requirements. 2.75039 [ 2.50053] ((1 . 6) (2 . 7) (4 . 9) (5 . 10)) 6.812 {0/1:6} B:0 2.75063 [ 2.50084] ((1 . 3) (2 . 4) (4 . 5) (6 . 6)) 7.669 {0/0:6} B:0 2.75088 [ 2.50117] ((4 . 3) (5 . 4) (6 . 5) (9 . 6)) 8.316 {0/0:6} B:0 2.75088 [ 2.50117] ((2 . 4) (6 . 6) (9 . 9) (11 . 11)) 8.327 {0/0:6} B:0 2.75118 [ 2.50157] ((1 . 3) (2 . 4) (4 . 5) (7 . 10)) 8.962 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.4544 [and 1/min{score2}: 0.4997] [2595, 5601]: Comparing 1isp_A and 1ra9, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 16 (6 H + 10 S) secondary structure elements in 1ra9, of which 13 satisfy the size requirements. 1.83363 [ 2.16685] ((1 . 5) (4 . 7) (5 . 9) (6 . 10) (7 . 11) (9 . 12)) 4.676 {0/9:15} B:0 2.20011 [ 2.60007] ((1 . 1) (2 . 4) (4 . 5) (9 . 12) (11 . 15)) 4.183 {0/4:10} B:0 2.20027 [ 2.60016] ((4 . 5) (5 . 9) (6 . 10) (7 . 11) (9 . 12)) 5.226 {0/6:10} B:0 2.20053 [ 2.60032] ((4 . 5) (5 . 9) (7 . 11) (9 . 12) (11 . 15)) 6.213 {0/6:10} B:0 2.75006 [ 3.25004] ((1 . 1) (4 . 5) (11 . 12) (13 . 15)) 4.287 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.7456 [and 1/min{score2}: 0.6815] [2595, 5638]: Comparing 1isp_A and 1rhy_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 14 (4 H + 10 S) secondary structure elements in 1rhy_A, of which 6 satisfy the size requirements. NO SIMILARITY! [2595, 5640]: Comparing 1isp_A and 1ri6_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 31 (2 H + 29 S) secondary structure elements in 1ri6_A, of which 28 satisfy the size requirements. 1.83385 [ 4.66670] ((1 . 9) (4 . 10) (6 . 14) (9 . 19) (11 . 20) (13 . 24)) 5.381 {0/4:15} B:0 2.20027 [ 5.60002] ((1 . 14) (6 . 20) (9 . 21) (11 . 22) (13 . 26)) 5.253 {0/3:10} B:0 2.20033 [ 5.60002] ((4 . 1) (6 . 6) (9 . 8) (11 . 10) (13 . 12)) 5.523 {0/4:10} B:0 2.20059 [ 5.60004] ((4 . 10) (6 . 14) (9 . 17) (11 . 20) (13 . 22)) 6.366 {0/4:10} B:0 2.75011 [ 7.00001] ((6 . 14) (9 . 18) (11 . 20) (13 . 22)) 4.909 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.5453 [and 1/min{score2}: 0.2143] [2595, 5644]: Comparing 1isp_A and 1rie, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 14 (4 H + 10 S) secondary structure elements in 1rie, of which 10 satisfy the size requirements. 2.75172 [ 2.50229] ((6 . 4) (9 . 8) (11 . 10) (13 . 13)) 9.840 {0/1:6} B:0 2.75184 [ 2.50245] ((4 . 1) (6 . 4) (11 . 11) (13 . 13)) 10.010 {0/4:6} B:0 2.75207 [ 2.50275] ((4 . 3) (5 . 5) (9 . 8) (13 . 14)) 10.305 {0/4:6} B:0 2.75322 [ 2.50429] ((4 . 4) (6 . 8) (9 . 11) (11 . 14)) 11.519 {0/1:6} B:0 3.13319 [ 2.97413] ((4 . 3) (5 . 5) (6 . 8) (9 . 10)) 9.350 {1/4:6} B:0 SIMILARITY (1/min{score1}): 0.3634 [and 1/min{score2}: 0.3996] [2595, 5648]: Comparing 1isp_A and 1rj1_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 8 (8 H + 0 S) secondary structure elements in 1rj1_A, of which 8 satisfy the size requirements. NO SIMILARITY! [2595, 5656]: Comparing 1isp_A and 1rkd, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 28 (14 H + 14 S) secondary structure elements in 1rkd, of which 24 satisfy the size requirements. 2.20011 [ 4.80001] ((7 . 4) (9 . 5) (11 . 8) (14 . 11) (15 . 12)) 4.219 {0/4:10} B:0 2.20100 [ 4.80010] ((2 . 4) (4 . 5) (5 . 6) (9 . 14) (11 . 16)) 7.273 {0/6:10} B:0 2.20129 [ 4.80012] ((4 . 5) (5 . 6) (7 . 11) (9 . 14) (11 . 16)) 7.754 {0/6:10} B:0 2.20132 [ 4.80013] ((4 . 5) (5 . 6) (7 . 11) (11 . 14) (13 . 16)) 7.790 {0/6:10} B:0 2.29652 [ 4.80989] ((1 . 5) (2 . 6) (9 . 14) (11 . 16) (14 . 20)) 11.016 {1/7:10} B:0 SIMILARITY (1/min{score1}): 0.9904 [and 1/min{score2}: 0.4581] [2595, 5689]: Comparing 1isp_A and 1rqj_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 19 (17 H + 2 S) secondary structure elements in 1rqj_A, of which 16 satisfy the size requirements. 2.75160 [ 4.00052] ((5 . 4) (7 . 8) (14 . 11) (15 . 12)) 9.665 {0/2:6} B:0 4.20800 [ 4.75765] ((2 . 7) (7 . 10) (14 . 16) (15 . 17)) 12.347 {2/5:6} B:0 SIMILARITY (1/min{score1}): 0.3634 [and 1/min{score2}: 0.2500] [2595, 5700]: Comparing 1isp_A and 1rsy, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 11 (3 H + 8 S) secondary structure elements in 1rsy, of which 9 satisfy the size requirements. 2.75023 [ 2.25042] ((6 . 2) (9 . 4) (11 . 6) (14 . 7)) 5.956 {0/3:6} B:0 2.75037 [ 2.25068] ((6 . 2) (11 . 4) (13 . 6) (14 . 7)) 6.723 {0/4:6} B:0 2.75080 [ 2.25146] ((4 . 2) (6 . 4) (9 . 6) (11 . 9)) 8.132 {0/3:6} B:0 2.75090 [ 2.25164] ((4 . 2) (6 . 4) (9 . 6) (13 . 9)) 8.372 {0/4:6} B:0 3.13477 [ 2.83945] ((2 . 1) (4 . 2) (6 . 4) (9 . 6)) 11.958 {1/4:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.4444] [2595, 5701]: Comparing 1isp_A and 1rtq_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 20 (11 H + 9 S) secondary structure elements in 1rtq_A, of which 15 satisfy the size requirements. 2.20291 [ 3.00115] ((2 . 3) (4 . 4) (6 . 6) (7 . 7) (9 . 8)) 9.500 {0/4:10} B:0 2.50594 [ 3.13836] ((2 . 7) (4 . 8) (5 . 10) (6 . 11) (15 . 20)) 4.966 {1/5:10} B:0 2.75011 [ 3.75004] ((1 . 6) (6 . 8) (7 . 10) (15 . 20)) 4.983 {0/0:6} B:0 2.75035 [ 3.75014] ((2 . 3) (4 . 4) (6 . 6) (13 . 11)) 6.620 {0/4:6} B:0 2.75045 [ 3.75018] ((5 . 3) (9 . 6) (11 . 8) (13 . 11)) 7.027 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.6650 [and 1/min{score2}: 0.5179] [2595, 5702]: Comparing 1isp_A and 1rtr_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 16 (14 H + 2 S) secondary structure elements in 1rtr_A, of which 14 satisfy the size requirements. NO SIMILARITY! [2595, 5703]: Comparing 1isp_A and 1rtu, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 9 (2 H + 7 S) secondary structure elements in 1rtu, of which 7 satisfy the size requirements. 2.75025 [ 1.75095] ((7 . 3) (9 . 6) (11 . 7) (13 . 8)) 6.053 {0/0:6} B:0 2.75038 [ 1.75148] ((1 . 1) (2 . 3) (6 . 6) (9 . 8)) 6.760 {0/4:6} B:0 3.66628 [ 3.39510] ((2 . 3) (6 . 6) (9 . 7) (11 . 8)) 6.621 {1/3:6} B:0 3.66632 [ 3.39515] ((5 . 3) (9 . 6) (11 . 7) (13 . 8)) 7.035 {1/3:6} B:0 5.11073 [ 5.01873] ((2 . 3) (4 . 5) (6 . 7) (9 . 8)) 7.062 {2/4:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.5711] [2595, 5704]: Comparing 1isp_A and 1rtw_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 10 (10 H + 0 S) secondary structure elements in 1rtw_A, of which 10 satisfy the size requirements. NO SIMILARITY! [2595, 5711]: Comparing 1isp_A and 1rwh_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 60 (22 H + 38 S) secondary structure elements in 1rwh_A, of which 18 satisfy the size requirements. 2.75091 [ 4.50021] ((1 . 29) (4 . 32) (6 . 35) (11 . 42)) 8.398 {0/2:6} B:0 2.75113 [ 4.50026] ((1 . 29) (6 . 35) (9 . 38) (11 . 42)) 8.868 {0/2:6} B:0 2.75134 [ 4.50031] ((4 . 33) (6 . 36) (9 . 39) (11 . 43)) 9.246 {0/2:6} B:0 2.75161 [ 4.50037] ((1 . 33) (4 . 36) (9 . 43) (11 . 46)) 9.687 {0/4:6} B:0 2.75283 [ 4.50065] ((1 . 33) (4 . 36) (11 . 46) (14 . 48)) 11.151 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.3635 [and 1/min{score2}: 0.2644] [2595, 5713]: Comparing 1isp_A and 1rwi_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 28 (4 H + 24 S) secondary structure elements in 1rwi_A, of which 21 satisfy the size requirements. 2.08832 [ 3.54418] ((1 . 15) (4 . 18) (6 . 20) (9 . 24) (11 . 25) (13 . 27)) 4.409 {1/6:15} B:0 2.75004 [ 5.25001] ((1 . 10) (4 . 13) (11 . 24) (13 . 27)) 3.736 {0/3:6} B:0 2.75005 [ 5.25001] ((1 . 10) (4 . 13) (9 . 20) (11 . 22)) 4.149 {0/3:6} B:0 2.75006 [ 5.25001] ((1 . 15) (4 . 18) (9 . 24) (11 . 27)) 4.200 {0/3:6} B:0 2.75006 [ 5.25001] ((1 . 10) (4 . 13) (9 . 20) (11 . 24)) 4.218 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.5446 [and 1/min{score2}: 0.2857] [2595, 5718]: Comparing 1isp_A and 1rwz_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 25 (7 H + 18 S) secondary structure elements in 1rwz_A, of which 10 satisfy the size requirements. 2.75058 [ 2.50077] ((1 . 14) (4 . 17) (6 . 21) (9 . 24)) 7.486 {0/3:6} B:0 2.75079 [ 2.50105] ((5 . 15) (6 . 16) (11 . 23) (13 . 25)) 8.092 {0/4:6} B:0 2.75102 [ 2.50136] ((5 . 15) (6 . 16) (9 . 18) (11 . 23)) 8.647 {0/2:6} B:0 2.75186 [ 2.50247] ((4 . 14) (6 . 17) (9 . 21) (11 . 23)) 10.034 {0/2:6} B:0 2.75212 [ 2.50281] ((4 . 18) (5 . 22) (6 . 23) (9 . 25)) 10.366 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.3752 [and 1/min{score2}: 0.3999] [2595, 5731]: Comparing 1isp_A and 1rz0_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 15 (3 H + 12 S) secondary structure elements in 1rz0_A, of which 15 satisfy the size requirements. 2.75164 [ 3.75065] ((4 . 7) (5 . 8) (6 . 10) (11 . 15)) 9.731 {0/3:6} B:0 2.75244 [ 3.75097] ((4 . 2) (6 . 5) (7 . 6) (9 . 9)) 10.748 {0/4:6} B:0 3.13268 [ 3.92309] ((5 . 6) (6 . 7) (7 . 8) (11 . 13)) 7.740 {1/4:6} B:0 3.66634 [ 4.23361] ((1 . 2) (4 . 5) (5 . 8) (9 . 11)) 7.140 {1/3:6} B:0 3.66652 [ 4.23373] ((1 . 3) (4 . 7) (5 . 8) (11 . 15)) 8.376 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.4543 [and 1/min{score2}: 0.3333] [2595, 5746]: Comparing 1isp_A and 1s14_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 14 (5 H + 9 S) secondary structure elements in 1s14_A, of which 13 satisfy the size requirements. 2.20263 [ 2.60159] ((1 . 3) (2 . 4) (4 . 6) (6 . 9) (11 . 14)) 9.259 {0/6:10} B:0 2.75013 [ 3.25008] ((4 . 3) (5 . 4) (6 . 6) (9 . 9)) 5.203 {0/2:6} B:0 2.75037 [ 3.25023] ((4 . 7) (6 . 10) (7 . 12) (9 . 13)) 6.712 {0/2:6} B:0 2.75096 [ 3.25058] ((5 . 1) (6 . 2) (9 . 3) (13 . 7)) 8.510 {0/1:6} B:0 2.75137 [ 3.25083] ((7 . 1) (9 . 3) (11 . 6) (13 . 7)) 9.303 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.4540 [and 1/min{score2}: 0.3844] [2595, 5749]: Comparing 1isp_A and 1s1q_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 10 (4 H + 6 S) secondary structure elements in 1s1q_A, of which 8 satisfy the size requirements. 2.75158 [ 2.00411] ((7 . 2) (11 . 5) (13 . 6) (15 . 8)) 9.643 {0/0:6} B:0 2.75177 [ 2.00459] ((5 . 2) (6 . 3) (9 . 5) (15 . 9)) 9.915 {0/2:6} B:0 2.75209 [ 2.00541] ((5 . 2) (6 . 3) (9 . 4) (14 . 8)) 10.329 {0/3:6} B:0 2.75309 [ 2.00800] ((2 . 2) (4 . 4) (6 . 6) (7 . 8)) 11.400 {0/2:6} B:0 3.66671 [ 3.43715] ((5 . 1) (7 . 2) (13 . 6) (15 . 8)) 9.287 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.3634 [and 1/min{score2}: 0.4990] [2595, 5761]: Comparing 1isp_A and 1s3e_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 44 (23 H + 21 S) secondary structure elements in 1s3e_A, of which 8 satisfy the size requirements. 2.75013 [ 2.00035] ((4 . 30) (6 . 32) (7 . 33) (11 . 36)) 5.199 {0/3:6} B:0 2.75043 [ 2.00113] ((7 . 29) (11 . 30) (13 . 32) (14 . 34)) 6.978 {0/2:6} B:0 2.75060 [ 2.00156] ((7 . 29) (9 . 30) (11 . 32) (14 . 34)) 7.563 {0/2:6} B:0 2.75260 [ 2.00674] ((4 . 28) (6 . 31) (9 . 32) (11 . 36)) 10.919 {0/1:6} B:0 3.13250 [ 2.72445] ((5 . 29) (6 . 30) (9 . 32) (13 . 36)) 6.801 {1/4:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.4999] [2595, 5770]: Comparing 1isp_A and 1s5d_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 22 (12 H + 10 S) secondary structure elements in 1s5d_A, of which 14 satisfy the size requirements. 3.13253 [ 3.70858] ((4 . 6) (6 . 9) (14 . 21) (15 . 22)) 6.961 {1/4:6} B:0 3.13454 [ 3.70979] ((5 . 7) (6 . 8) (14 . 19) (15 . 21)) 11.670 {1/4:6} B:0 3.66633 [ 4.06689] ((4 . 6) (5 . 7) (6 . 8) (14 . 19)) 7.049 {1/3:6} B:0 3.66640 [ 4.06694] ((7 . 2) (11 . 6) (14 . 7) (15 . 10)) 7.635 {1/3:6} B:0 5.11075 [ 5.27644] ((1 . 1) (5 . 7) (6 . 8) (14 . 19)) 7.515 {1/2:6} B:0 SIMILARITY (1/min{score1}): 0.4544 [and 1/min{score2}: 0.3571] [2595, 5771]: Comparing 1isp_A and 1s5p_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 22 (9 H + 13 S) secondary structure elements in 1s5p_A, of which 16 satisfy the size requirements. 1.57164 [ 2.28578] ((1 . 1) (4 . 9) (6 . 17) (7 . 19) (9 . 20) (11 . 21) (15 . 22)) 3.832 {0/5:21} B:0 1.83559 [ 2.66740] ((4 . 9) (5 . 10) (9 . 17) (11 . 20) (13 . 21) (15 . 22)) 7.771 {0/7:15} B:0 1.87373 [ 2.68013] ((1 . 9) (2 . 10) (9 . 17) (11 . 20) (13 . 21) (14 . 22)) 6.609 {1/10:15} B:0 2.29271 [ 3.23161] ((1 . 9) (2 . 10) (9 . 17) (11 . 21) (14 . 22)) 7.169 {1/7:10} B:0 2.75001 [ 4.00000] ((1 . 9) (6 . 17) (9 . 20) (11 . 21)) 2.814 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.8179 [and 1/min{score2}: 0.5625] [2595, 5782]: Comparing 1isp_A and 1s9r_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 39 (20 H + 19 S) secondary structure elements in 1s9r_A, of which 33 satisfy the size requirements. 2.20060 [ 6.60002] ((5 . 23) (6 . 24) (11 . 29) (13 . 30) (14 . 31)) 6.385 {0/3:10} B:0 2.20140 [ 6.60005] ((1 . 15) (4 . 18) (5 . 23) (13 . 30) (14 . 31)) 7.903 {0/4:10} B:0 2.20169 [ 6.60006] ((1 . 15) (4 . 18) (5 . 23) (6 . 24) (14 . 31)) 8.293 {0/1:10} B:0 2.75014 [ 8.25001] ((4 . 22) (5 . 23) (6 . 24) (13 . 32)) 5.241 {0/3:6} B:0 2.75033 [ 8.25001] ((4 . 22) (5 . 23) (6 . 24) (14 . 33)) 6.509 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.5579 [and 1/min{score2}: 0.2790] [2595, 5789]: Comparing 1isp_A and 1scf_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 6 (4 H + 2 S) secondary structure elements in 1scf_A, of which 6 satisfy the size requirements. NO SIMILARITY! [2595, 5794]: Comparing 1isp_A and 1sdj_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 26 (7 H + 19 S) secondary structure elements in 1sdj_A, of which 11 satisfy the size requirements. 2.75013 [ 2.75013] ((4 . 19) (5 . 22) (6 . 23) (9 . 25)) 5.178 {0/4:6} B:0 2.75088 [ 2.75088] ((1 . 16) (2 . 17) (4 . 18) (9 . 24)) 8.331 {0/3:6} B:0 3.13348 [ 3.13348] ((6 . 16) (7 . 17) (11 . 19) (14 . 22)) 9.998 {1/4:6} B:0 3.66639 [ 3.66639] ((1 . 15) (6 . 19) (7 . 22) (9 . 23)) 7.582 {1/3:6} B:0 5.04626 [ 5.04626] ((1 . 18) (4 . 19) (7 . 22) (9 . 23) (11 . 25)) 6.552 {3/6:10} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.3636] [2595, 5795]: Comparing 1isp_A and 1sdo_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 16 (10 H + 6 S) secondary structure elements in 1sdo_A, of which 15 satisfy the size requirements. 2.75004 [ 3.75002] ((2 . 5) (7 . 11) (9 . 13) (13 . 16)) 3.868 {0/2:6} B:0 2.75049 [ 3.75019] ((2 . 11) (4 . 13) (5 . 15) (6 . 16)) 7.193 {0/2:6} B:0 2.75076 [ 3.75030] ((1 . 13) (2 . 14) (5 . 15) (6 . 16)) 8.036 {0/3:6} B:0 2.75120 [ 3.75047] ((2 . 11) (4 . 13) (7 . 15) (9 . 16)) 8.990 {0/3:6} B:0 2.75202 [ 3.75080] ((2 . 7) (6 . 10) (7 . 11) (9 . 13)) 10.251 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.4545 [and 1/min{score2}: 0.3333] [2595, 5809]: Comparing 1isp_A and 1sfs_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 16 (8 H + 8 S) secondary structure elements in 1sfs_A, of which 15 satisfy the size requirements. 1.83342 [ 2.50003] ((4 . 7) (5 . 8) (6 . 9) (7 . 10) (9 . 12) (11 . 14)) 3.402 {0/9:15} B:0 2.20015 [ 3.00006] ((4 . 5) (5 . 6) (6 . 7) (9 . 9) (13 . 14)) 4.514 {0/7:10} B:0 2.20023 [ 3.00009] ((4 . 3) (5 . 4) (6 . 5) (11 . 7) (13 . 9)) 5.032 {0/7:10} B:0 2.20027 [ 3.00011] ((4 . 3) (5 . 4) (6 . 5) (9 . 7) (13 . 9)) 5.249 {0/7:10} B:0 2.20039 [ 3.00015] ((2 . 4) (4 . 5) (5 . 6) (6 . 7) (9 . 9)) 5.748 {0/7:10} B:0 SIMILARITY (1/min{score1}): 0.9047 [and 1/min{score2}: 0.6657] [2595, 5822]: Comparing 1isp_A and 1sjy_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 11 (3 H + 8 S) secondary structure elements in 1sjy_A, of which 10 satisfy the size requirements. 3.66678 [ 3.57117] ((1 . 1) (5 . 5) (6 . 6) (11 . 9)) 9.546 {1/3:6} B:0 5.11074 [ 5.07645] ((4 . 1) (7 . 5) (11 . 9) (14 . 10)) 7.443 {2/4:6} B:0 3.13268 [ 2.97354] ((1 . 6) (2 . 5) (4 . 8) (7 . 11)) 7.728 {1/4:6} B:1 5.74549 [ 5.73568] ((1 . 8) (2 . 5) (4 . 6) (6 . 1) (7 . 11)) 7.869 {4/7:10} B:2 SIMILARITY (1/min{score1}): 0.3192 [and 1/min{score2}: 0.3363] [2595, 5827]: Comparing 1isp_A and 1sml_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 22 (10 H + 12 S) secondary structure elements in 1sml_A, of which 18 satisfy the size requirements. 1.83471 [ 3.00031] ((4 . 5) (5 . 6) (6 . 8) (7 . 10) (9 . 11) (13 . 15)) 6.864 {0/4:15} B:0 1.92579 [ 3.02250] ((1 . 8) (4 . 11) (6 . 15) (9 . 16) (11 . 17) (13 . 19)) 5.661 {1/8:15} B:0 2.20010 [ 3.60002] ((4 . 3) (5 . 6) (6 . 8) (7 . 10) (9 . 11)) 4.092 {0/6:10} B:0 2.20028 [ 3.60006] ((1 . 8) (4 . 11) (9 . 15) (11 . 17) (13 . 19)) 5.278 {0/5:10} B:0 2.20100 [ 3.60023] ((1 . 8) (4 . 11) (11 . 17) (13 . 19) (15 . 21)) 7.265 {0/6:10} B:0 SIMILARITY (1/min{score1}): 0.5742 [and 1/min{score2}: 0.4530] [2595, 5830]: Comparing 1isp_A and 1smv_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 19 (8 H + 11 S) secondary structure elements in 1smv_A, of which 15 satisfy the size requirements. 2.75173 [ 3.75068] ((4 . 3) (5 . 5) (6 . 8) (11 . 13)) 9.854 {0/2:6} B:0 2.75180 [ 3.75071] ((4 . 1) (5 . 5) (6 . 6) (9 . 8)) 9.955 {0/2:6} B:0 2.75218 [ 3.75086] ((1 . 1) (4 . 3) (6 . 8) (11 . 13)) 10.443 {0/2:6} B:0 2.75262 [ 3.75103] ((6 . 1) (9 . 3) (11 . 7) (13 . 8)) 10.935 {0/0:6} B:0 2.75335 [ 3.75132] ((4 . 1) (6 . 6) (9 . 8) (13 . 13)) 11.634 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.4540 [and 1/min{score2}: 0.3733] [2595, 5847]: Comparing 1isp_A and 1ssx_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 22 (3 H + 19 S) secondary structure elements in 1ssx_A, of which 19 satisfy the size requirements. 2.75040 [ 4.75008] ((6 . 1) (9 . 10) (11 . 11) (13 . 13)) 6.828 {0/1:6} B:0 2.75123 [ 4.75024] ((1 . 1) (4 . 5) (6 . 10) (11 . 15)) 9.047 {0/2:6} B:0 2.75163 [ 4.75032] ((1 . 10) (4 . 13) (6 . 17) (9 . 20)) 9.713 {0/2:6} B:0 3.13350 [ 4.83895] ((1 . 5) (4 . 8) (9 . 14) (15 . 21)) 10.037 {1/4:6} B:0 3.66666 [ 5.01518] ((4 . 3) (6 . 8) (9 . 10) (11 . 13)) 9.064 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.3990 [and 1/min{score2}: 0.2583] [2595, 5861]: Comparing 1isp_A and 1suu_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 30 (7 H + 23 S) secondary structure elements in 1suu_A, of which 18 satisfy the size requirements. 2.20149 [ 3.60034] ((1 . 15) (4 . 17) (6 . 20) (9 . 22) (13 . 27)) 8.035 {0/6:10} B:0 2.75026 [ 4.50006] ((1 . 11) (9 . 21) (11 . 25) (13 . 26)) 6.165 {0/2:6} B:0 2.75031 [ 4.50007] ((1 . 20) (4 . 22) (6 . 25) (11 . 30)) 6.412 {0/2:6} B:0 2.75032 [ 4.50007] ((4 . 7) (9 . 15) (11 . 17) (13 . 20)) 6.471 {0/3:6} B:0 2.75038 [ 4.50009] ((4 . 22) (6 . 25) (9 . 27) (11 . 30)) 6.768 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.5453 [and 1/min{score2}: 0.3333] [2595, 5865]: Comparing 1isp_A and 1svy, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 8 (3 H + 5 S) secondary structure elements in 1svy, of which 7 satisfy the size requirements. 2.75005 [ 1.75020] ((4 . 1) (6 . 4) (9 . 5) (11 . 7)) 4.084 {0/2:6} B:0 2.75008 [ 1.75030] ((4 . 1) (6 . 5) (7 . 6) (9 . 7)) 4.527 {0/3:6} B:0 2.75012 [ 1.75048] ((6 . 1) (11 . 5) (13 . 7) (15 . 8)) 5.099 {0/1:6} B:0 2.75022 [ 1.75085] ((1 . 1) (4 . 5) (5 . 6) (6 . 7)) 5.876 {0/0:6} B:0 5.11074 [ 5.01874] ((6 . 1) (11 . 5) (13 . 7) (14 . 8)) 7.380 {2/4:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.5714] [2595, 5878]: Comparing 1isp_A and 1t2d_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 31 (15 H + 16 S) secondary structure elements in 1t2d_A, of which 11 satisfy the size requirements. 2.75080 [ 2.75080] ((2 . 13) (9 . 25) (11 . 28) (14 . 31)) 8.126 {0/5:6} B:0 SIMILARITY (1/min{score1}): 0.3635 [and 1/min{score2}: 0.3635] [2595, 5888]: Comparing 1isp_A and 1tbg_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 30 (2 H + 28 S) secondary structure elements in 1tbg_A, of which 30 satisfy the size requirements. 2.08854 [ 5.01539] ((1 . 4) (4 . 6) (6 . 8) (9 . 16) (11 . 17) (13 . 18)) 5.492 {1/6:15} B:0 2.20011 [ 6.00001] ((4 . 5) (6 . 9) (9 . 11) (11 . 13) (13 . 15)) 4.140 {0/4:10} B:0 2.75005 [ 7.50000] ((6 . 13) (9 . 16) (11 . 17) (13 . 21)) 3.967 {0/1:6} B:0 2.75010 [ 7.50001] ((4 . 17) (9 . 23) (11 . 25) (13 . 27)) 4.870 {0/3:6} B:0 2.75025 [ 7.50001] ((1 . 16) (4 . 18) (6 . 22) (9 . 24)) 6.066 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.4789 [and 1/min{score2}: 0.1994] [2595, 5896]: Comparing 1isp_A and 1tdj, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 38 (20 H + 18 S) secondary structure elements in 1tdj, of which 7 satisfy the size requirements. 2.75039 [ 1.75149] ((1 . 26) (2 . 27) (4 . 28) (7 . 32)) 6.770 {0/3:6} B:0 2.75110 [ 1.75426] ((9 . 26) (11 . 28) (13 . 29) (15 . 30)) 8.801 {0/0:6} B:0 5.11068 [ 5.01868] ((1 . 29) (2 . 30) (4 . 31) (5 . 32)) 5.493 {1/2:6} B:0 10.01431 [10.00239] ((1 . 28) (2 . 27) (4 . 29) (5 . 30)) 10.486 {1/1:6} B:1 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.5709] [2595, 5904]: Comparing 1isp_A and 1tfr, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 24 (16 H + 8 S) secondary structure elements in 1tfr, of which 11 satisfy the size requirements. 2.20018 [ 2.20018] ((1 . 4) (4 . 7) (5 . 8) (7 . 10) (9 . 11)) 4.764 {0/5:10} B:0 2.20027 [ 2.20027] ((1 . 1) (5 . 3) (6 . 4) (7 . 6) (9 . 7)) 5.232 {0/5:10} B:0 2.20061 [ 2.20061] ((2 . 3) (4 . 4) (6 . 7) (9 . 9) (11 . 11)) 6.415 {0/6:10} B:0 2.20351 [ 2.20351] ((1 . 1) (5 . 3) (6 . 4) (9 . 7) (13 . 11)) 9.953 {0/6:10} B:0 2.36469 [ 2.36469] ((1 . 1) (2 . 3) (4 . 4) (7 . 6) (9 . 7)) 9.530 {1/6:10} B:0 SIMILARITY (1/min{score1}): 0.7267 [and 1/min{score2}: 0.7267] [2595, 5913]: Comparing 1isp_A and 1tib, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 23 (13 H + 10 S) secondary structure elements in 1tib, of which 17 satisfy the size requirements. 2.20012 [ 3.40003] ((1 . 5) (7 . 11) (9 . 13) (11 . 15) (13 . 17)) 4.311 {0/4:10} B:0 2.20045 [ 3.40012] ((1 . 5) (5 . 11) (9 . 13) (11 . 15) (13 . 17)) 5.956 {0/6:10} B:0 2.75004 [ 4.25001] ((4 . 13) (6 . 15) (9 . 17) (11 . 20)) 3.769 {0/1:6} B:0 2.75006 [ 4.25002] ((4 . 13) (5 . 14) (6 . 17) (9 . 20)) 4.190 {0/1:6} B:0 2.75008 [ 4.25002] ((4 . 5) (6 . 7) (11 . 13) (13 . 15)) 4.570 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.5249 [and 1/min{score2}: 0.4534] [2595, 5914]: Comparing 1isp_A and 1tif, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 7 (3 H + 4 S) secondary structure elements in 1tif, of which 6 satisfy the size requirements. NO SIMILARITY! [2595, 5922]: Comparing 1isp_A and 1tnr_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 13 (2 H + 11 S) secondary structure elements in 1tnr_A, of which 11 satisfy the size requirements. 2.75043 [ 2.75043] ((6 . 8) (9 . 9) (11 . 11) (13 . 13)) 6.962 {0/1:6} B:0 2.75050 [ 2.75050] ((6 . 1) (9 . 4) (11 . 6) (13 . 9)) 7.230 {0/1:6} B:0 2.75064 [ 2.75064] ((4 . 8) (6 . 10) (9 . 11) (11 . 13)) 7.698 {0/1:6} B:0 2.75075 [ 2.75075] ((4 . 1) (6 . 4) (9 . 6) (11 . 9)) 8.002 {0/2:6} B:0 2.75086 [ 2.75086] ((1 . 5) (4 . 8) (6 . 10) (9 . 13)) 8.265 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.3636] [2595, 5930]: Comparing 1isp_A and 1trb, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 31 (10 H + 21 S) secondary structure elements in 1trb, of which 12 satisfy the size requirements. 2.75004 [ 3.00003] ((6 . 2) (7 . 3) (9 . 4) (11 . 7)) 3.922 {0/0:6} B:0 2.75013 [ 3.00010] ((4 . 2) (5 . 3) (7 . 6) (9 . 7)) 5.129 {0/2:6} B:0 2.75123 [ 3.00095] ((4 . 2) (7 . 6) (9 . 7) (13 . 12)) 9.050 {0/1:6} B:0 3.66643 [ 3.78165] ((2 . 3) (4 . 4) (6 . 7) (11 . 12)) 7.867 {1/3:6} B:0 3.66683 [ 3.78202] ((5 . 3) (6 . 4) (9 . 7) (13 . 12)) 9.743 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.5580 [and 1/min{score2}: 0.5282] [2595, 5939]: Comparing 1isp_A and 1tyf_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 16 (7 H + 9 S) secondary structure elements in 1tyf_A, of which 14 satisfy the size requirements. 1.83397 [ 2.33364] ((2 . 1) (5 . 3) (6 . 4) (7 . 5) (9 . 6) (11 . 8)) 5.662 {0/6:15} B:0 2.20005 [ 2.80002] ((1 . 2) (5 . 3) (6 . 4) (9 . 6) (11 . 8)) 3.357 {0/2:10} B:0 2.20015 [ 2.80007] ((6 . 2) (7 . 3) (9 . 4) (11 . 6) (13 . 8)) 4.526 {0/1:10} B:0 2.20054 [ 2.80026] ((4 . 4) (5 . 5) (6 . 6) (9 . 8) (15 . 15)) 6.218 {0/4:10} B:0 2.50607 [ 2.96690] ((5 . 1) (6 . 2) (9 . 4) (11 . 6) (13 . 8)) 5.850 {1/5:10} B:0 SIMILARITY (1/min{score1}): 0.5454 [and 1/min{score2}: 0.4285] [2595, 5945]: Comparing 1isp_A and 1ua4_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 39 (21 H + 18 S) secondary structure elements in 1ua4_A, of which 33 satisfy the size requirements. 2.20029 [ 6.60001] ((1 . 26) (4 . 28) (5 . 31) (6 . 32) (15 . 39)) 5.325 {0/2:10} B:0 2.50582 [ 6.61387] ((4 . 23) (5 . 25) (6 . 26) (9 . 28) (11 . 32)) 3.338 {1/5:10} B:0 2.50796 [ 6.61399] ((1 . 28) (2 . 31) (4 . 32) (11 . 38) (14 . 39)) 9.728 {1/5:10} B:0 2.75012 [ 8.25000] ((1 . 11) (2 . 12) (9 . 23) (13 . 26)) 5.050 {0/4:6} B:0 2.75024 [ 8.25001] ((2 . 27) (5 . 31) (6 . 32) (15 . 39)) 6.038 {0/4:6} B:0 SIMILARITY (1/min{score1}): 0.9913 [and 1/min{score2}: 0.3333] [2595, 5949]: Comparing 1isp_A and 1ual_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 21 (11 H + 10 S) secondary structure elements in 1ual_A, of which 15 satisfy the size requirements. 2.20019 [ 3.00007] ((1 . 1) (4 . 4) (5 . 8) (6 . 9) (9 . 12)) 4.791 {0/3:10} B:0 2.20037 [ 3.00015] ((1 . 1) (2 . 2) (9 . 9) (11 . 12) (15 . 15)) 5.661 {0/5:10} B:0 2.20236 [ 3.00093] ((1 . 1) (4 . 4) (5 . 8) (7 . 11) (9 . 12)) 9.012 {0/4:10} B:0 2.20298 [ 3.00118] ((1 . 1) (4 . 4) (5 . 8) (7 . 11) (11 . 14)) 9.555 {0/6:10} B:0 2.36283 [ 3.06927] ((1 . 1) (2 . 2) (4 . 4) (13 . 14) (14 . 15)) 6.530 {1/6:10} B:0 SIMILARITY (1/min{score1}): 0.9030 [and 1/min{score2}: 0.6654] [2595, 5955]: Comparing 1isp_A and 1ub0_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 19 (8 H + 11 S) secondary structure elements in 1ub0_A, of which 17 satisfy the size requirements. 1.57161 [ 2.42862] ((2 . 2) (5 . 6) (6 . 7) (7 . 8) (9 . 9) (13 . 14) (15 . 18)) 3.683 {0/7:21} B:0 1.57357 [ 2.42915] ((1 . 1) (5 . 2) (6 . 3) (7 . 6) (9 . 7) (11 . 9) (15 . 18)) 6.836 {0/2:21} B:0 1.66166 [ 2.45478] ((1 . 1) (2 . 2) (4 . 3) (5 . 6) (6 . 7) (9 . 9) (13 . 14)) 3.255 {1/9:21} B:0 2.20021 [ 3.40006] ((4 . 9) (5 . 10) (9 . 14) (11 . 17) (14 . 18)) 4.943 {0/5:10} B:0 2.20022 [ 3.40006] ((5 . 8) (6 . 9) (7 . 10) (11 . 14) (15 . 18)) 4.979 {0/1:10} B:0 SIMILARITY (1/min{score1}): 0.7272 [and 1/min{score2}: 0.4706] [2595, 5967]: Comparing 1isp_A and 1uc8_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 24 (11 H + 13 S) secondary structure elements in 1uc8_A, of which 7 satisfy the size requirements. 1.92537 [ 1.43983] ((1 . 1) (2 . 2) (4 . 3) (5 . 6) (6 . 7) (7 . 8)) 3.960 {1/8:15} B:0 2.20007 [ 1.40028] ((1 . 1) (4 . 3) (5 . 6) (6 . 7) (7 . 8)) 3.783 {0/5:10} B:0 2.75005 [ 1.75021] ((1 . 1) (2 . 2) (4 . 3) (5 . 8)) 4.159 {0/1:6} B:0 2.75107 [ 1.75413] ((4 . 1) (5 . 2) (6 . 7) (7 . 8)) 8.735 {0/3:6} B:0 3.66644 [ 3.39530] ((6 . 1) (7 . 2) (9 . 3) (14 . 10)) 7.948 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.5194 [and 1/min{score2}: 0.7141] [2595, 5972]: Comparing 1isp_A and 1ucr_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 8 (5 H + 3 S) secondary structure elements in 1ucr_A, of which 6 satisfy the size requirements. NO SIMILARITY! [2595, 5977]: Comparing 1isp_A and 1udv_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 6 (2 H + 4 S) secondary structure elements in 1udv_A, of which 6 satisfy the size requirements. 2.20095 [ 1.20584] ((1 . 1) (2 . 2) (4 . 3) (5 . 4) (6 . 5)) 7.185 {0/3:10} B:0 2.36235 [ 1.76896] ((4 . 1) (5 . 2) (6 . 3) (7 . 4) (9 . 5)) 3.535 {1/6:10} B:0 2.75019 [ 1.50118] ((6 . 1) (7 . 2) (9 . 3) (11 . 5)) 5.681 {0/0:6} B:0 2.75051 [ 1.50316] ((1 . 3) (2 . 4) (4 . 5) (6 . 6)) 7.277 {0/1:6} B:0 2.20043 [ 1.20264] ((6 . 1) (7 . 2) (9 . 3) (11 . 6) (13 . 5)) 5.884 {0/1:10} B:1 SIMILARITY (1/min{score1}): 0.4545 [and 1/min{score2}: 0.8315] [2595, 6000]: Comparing 1isp_A and 1ufa_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 40 (26 H + 14 S) secondary structure elements in 1ufa_A, of which 22 satisfy the size requirements. 2.20084 [ 4.40011] ((1 . 9) (5 . 11) (9 . 17) (13 . 28) (15 . 30)) 6.968 {0/6:10} B:0 2.75009 [ 5.50001] ((4 . 9) (5 . 11) (7 . 16) (9 . 17)) 4.729 {0/4:6} B:0 2.75010 [ 5.50001] ((4 . 9) (5 . 11) (11 . 17) (13 . 21)) 4.826 {0/4:6} B:0 2.75016 [ 5.50002] ((2 . 8) (5 . 11) (11 . 17) (13 . 21)) 5.424 {0/5:6} B:0 2.75028 [ 5.50003] ((5 . 27) (6 . 28) (7 . 30) (9 . 31)) 6.245 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.7264 [and 1/min{score2}: 0.4035] [2595, 6011]: Comparing 1isp_A and 1ug9_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 80 (30 H + 50 S) secondary structure elements in 1ug9_A, of which 20 satisfy the size requirements. 2.20057 [ 4.00010] ((4 . 9) (6 . 11) (9 . 14) (11 . 16) (13 . 18)) 6.328 {0/4:10} B:0 2.20114 [ 4.00019] ((1 . 3) (4 . 5) (9 . 11) (11 . 14) (13 . 16)) 7.513 {0/6:10} B:0 2.75083 [ 5.00014] ((6 . 14) (9 . 16) (13 . 20) (15 . 21)) 8.190 {0/0:6} B:0 2.75125 [ 5.00021] ((1 . 11) (4 . 14) (6 . 16) (11 . 20)) 9.086 {0/0:6} B:0 2.75190 [ 5.00032] ((1 . 11) (4 . 14) (6 . 18) (9 . 20)) 10.088 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.4544 [and 1/min{score2}: 0.2500] [2595, 6022]: Comparing 1isp_A and 1uht_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 9 (0 H + 9 S) secondary structure elements in 1uht_A, of which 7 satisfy the size requirements. 2.75029 [ 1.75112] ((1 . 1) (4 . 2) (6 . 5) (9 . 8)) 6.302 {0/3:6} B:0 2.75082 [ 1.75318] ((6 . 1) (9 . 2) (11 . 4) (13 . 5)) 8.184 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.5711] [2595, 6028]: Comparing 1isp_A and 1uit_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 9 (2 H + 7 S) secondary structure elements in 1uit_A, of which 6 satisfy the size requirements. 10.01428 [10.00128] ((4 . 1) (5 . 4) (7 . 8) (9 . 9)) 8.177 {3/3:6} B:0 10.01429 [10.00129] ((1 . 1) (5 . 4) (6 . 9) (11 . 3)) 8.605 {3/3:6} B:1 SIMILARITY (1/min{score1}): 0.0999 [and 1/min{score2}: 0.0999] [2595, 6029]: Comparing 1isp_A and 1uiu_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 42 (19 H + 23 S) secondary structure elements in 1uiu_A, of which 33 satisfy the size requirements. 2.20168 [ 6.60006] ((1 . 31) (2 . 32) (4 . 35) (5 . 36) (11 . 40)) 8.277 {0/4:10} B:0 2.20256 [ 6.60010] ((1 . 31) (2 . 32) (4 . 33) (5 . 36) (11 . 40)) 9.201 {0/4:10} B:0 2.20372 [ 6.60014] ((4 . 31) (5 . 32) (6 . 33) (9 . 35) (13 . 40)) 10.098 {0/4:10} B:0 2.75032 [ 8.25001] ((6 . 17) (9 . 19) (11 . 21) (13 . 23)) 6.487 {0/1:6} B:0 2.75057 [ 8.25002] ((5 . 28) (9 . 31) (11 . 33) (13 . 35)) 7.476 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.4544 [and 1/min{score2}: 0.2046] [2595, 6033]: Comparing 1isp_A and 1ujk_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 10 (10 H + 0 S) secondary structure elements in 1ujk_A, of which 8 satisfy the size requirements. NO SIMILARITY! [2595, 6041]: Comparing 1isp_A and 1ukf_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 15 (7 H + 8 S) secondary structure elements in 1ukf_A, of which 13 satisfy the size requirements. 2.20032 [ 2.60020] ((2 . 6) (4 . 8) (5 . 9) (6 . 10) (9 . 12)) 5.488 {0/5:10} B:0 2.75023 [ 3.25014] ((2 . 6) (4 . 8) (5 . 9) (6 . 12)) 5.951 {0/4:6} B:0 2.75029 [ 3.25018] ((5 . 5) (11 . 11) (13 . 13) (15 . 14)) 6.312 {0/3:6} B:0 2.75030 [ 3.25018] ((1 . 11) (4 . 13) (5 . 14) (6 . 15)) 6.340 {0/2:6} B:0 2.75060 [ 3.25036] ((1 . 10) (4 . 13) (5 . 14) (6 . 15)) 7.566 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.4545 [and 1/min{score2}: 0.3846] [2595, 6046]: Comparing 1isp_A and 1ul7_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 7 (3 H + 4 S) secondary structure elements in 1ul7_A, of which 6 satisfy the size requirements. 2.75213 [ 1.51300] ((7 . 1) (9 . 2) (13 . 6) (15 . 7)) 10.389 {0/0:6} B:0 5.11091 [ 5.01036] ((2 . 1) (4 . 3) (6 . 6) (7 . 7)) 9.682 {2/4:6} B:0 2.75233 [ 1.51418] ((6 . 2) (7 . 1) (9 . 3) (14 . 7)) 10.621 {0/4:6} B:1 SIMILARITY (1/min{score1}): 0.3634 [and 1/min{score2}: 0.6609] [2595, 6061]: Comparing 1isp_A and 1un8_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 33 (20 H + 13 S) secondary structure elements in 1un8_A, of which 10 satisfy the size requirements. 2.20007 [ 2.00010] ((1 . 13) (5 . 16) (6 . 17) (7 . 18) (9 . 20)) 3.786 {0/5:10} B:0 2.20038 [ 2.00051] ((4 . 15) (5 . 16) (6 . 17) (7 . 18) (9 . 20)) 5.723 {0/6:10} B:0 2.75041 [ 2.50054] ((1 . 17) (2 . 18) (4 . 20) (5 . 22)) 6.857 {0/1:6} B:0 2.75052 [ 2.50069] ((2 . 16) (4 . 17) (5 . 18) (6 . 20)) 7.293 {0/2:6} B:0 2.75069 [ 2.50092] ((1 . 17) (2 . 18) (4 . 20) (7 . 22)) 7.845 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.5447 [and 1/min{score2}: 0.5988] [2595, 6074]: Comparing 1isp_A and 1upa_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 47 (28 H + 19 S) secondary structure elements in 1upa_A, of which 14 satisfy the size requirements. 1.92533 [ 2.38001] ((1 . 2) (4 . 4) (6 . 6) (7 . 7) (9 . 8) (14 . 14)) 3.641 {1/8:15} B:0 2.20006 [ 2.80003] ((4 . 2) (6 . 6) (7 . 7) (9 . 8) (13 . 11)) 3.606 {0/5:10} B:0 2.20010 [ 2.80005] ((4 . 2) (5 . 5) (6 . 6) (9 . 8) (11 . 11)) 4.073 {0/4:10} B:0 2.20011 [ 2.80006] ((4 . 4) (5 . 5) (6 . 6) (9 . 8) (11 . 11)) 4.232 {0/4:10} B:0 2.20015 [ 2.80007] ((1 . 2) (4 . 4) (11 . 11) (13 . 13) (14 . 14)) 4.506 {0/6:10} B:0 SIMILARITY (1/min{score1}): 0.9954 [and 1/min{score2}: 0.7843] [2595, 6075]: Comparing 1isp_A and 1upa_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 47 (28 H + 19 S) secondary structure elements in 1upa_A, of which 14 satisfy the size requirements. 2.20002 [ 2.80001] ((1 . 17) (4 . 20) (6 . 24) (9 . 27) (11 . 28)) 2.601 {0/5:10} B:0 2.20004 [ 2.80002] ((1 . 17) (4 . 21) (6 . 24) (9 . 27) (11 . 28)) 3.328 {0/5:10} B:0 2.20099 [ 2.80048] ((2 . 16) (4 . 17) (5 . 19) (6 . 20) (9 . 21)) 7.250 {0/7:10} B:0 2.50592 [ 2.96680] ((1 . 17) (4 . 20) (9 . 24) (11 . 28) (14 . 29)) 4.825 {1/5:10} B:0 2.50598 [ 2.96684] ((4 . 17) (9 . 24) (11 . 27) (13 . 28) (14 . 29)) 5.328 {1/5:10} B:0 SIMILARITY (1/min{score1}): 0.8063 [and 1/min{score2}: 0.6392] [2595, 6079]: Comparing 1isp_A and 1uq5_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 22 (12 H + 10 S) secondary structure elements in 1uq5_A, of which 18 satisfy the size requirements. 2.75007 [ 4.50002] ((4 . 1) (5 . 2) (6 . 6) (9 . 8)) 4.466 {0/2:6} B:0 2.75012 [ 4.50003] ((9 . 7) (11 . 9) (13 . 11) (14 . 12)) 5.083 {0/3:6} B:0 2.75060 [ 4.50014] ((1 . 7) (2 . 10) (4 . 11) (7 . 14)) 7.557 {0/4:6} B:0 2.75088 [ 4.50020] ((1 . 6) (4 . 8) (14 . 18) (15 . 19)) 8.332 {0/3:6} B:0 2.75235 [ 4.50054] ((6 . 1) (7 . 2) (11 . 7) (14 . 10)) 10.643 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.4536 [and 1/min{score2}: 0.3051] [2595, 6087]: Comparing 1isp_A and 1urh_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 21 (12 H + 9 S) secondary structure elements in 1urh_A, of which 8 satisfy the size requirements. 2.75043 [ 2.00113] ((7 . 4) (11 . 8) (13 . 10) (15 . 11)) 6.973 {0/0:6} B:0 2.75072 [ 2.00186] ((1 . 3) (5 . 4) (7 . 7) (9 . 8)) 7.908 {0/2:6} B:0 2.75100 [ 2.00261] ((4 . 3) (5 . 4) (7 . 7) (9 . 8)) 8.605 {0/2:6} B:0 2.75110 [ 2.00285] ((2 . 7) (4 . 8) (5 . 9) (6 . 10)) 8.797 {0/3:6} B:0 2.75143 [ 2.00371] ((4 . 3) (5 . 4) (11 . 8) (13 . 10)) 9.399 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.7204 [and 1/min{score2}: 0.9681] [2595, 6089]: Comparing 1isp_A and 1urs_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 34 (18 H + 16 S) secondary structure elements in 1urs_A, of which 26 satisfy the size requirements. 2.75009 [ 6.50001] ((6 . 1) (9 . 3) (11 . 5) (13 . 11)) 4.661 {0/0:6} B:0 2.75043 [ 6.50003] ((2 . 4) (4 . 5) (5 . 8) (6 . 11)) 6.946 {0/2:6} B:0 2.75044 [ 6.50003] ((1 . 1) (2 . 2) (4 . 3) (5 . 6)) 6.982 {0/1:6} B:0 2.75044 [ 6.50003] ((2 . 19) (4 . 21) (5 . 22) (6 . 23)) 6.991 {0/1:6} B:0 2.75113 [ 6.50009] ((4 . 5) (5 . 8) (6 . 11) (15 . 20)) 8.863 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.5453 [and 1/min{score2}: 0.2399] [2595, 6094]: Comparing 1isp_A and 1usc_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 16 (3 H + 13 S) secondary structure elements in 1usc_A, of which 15 satisfy the size requirements. 2.75032 [ 3.75013] ((6 . 5) (7 . 6) (9 . 7) (13 . 13)) 6.474 {0/2:6} B:0 5.11079 [ 5.35584] ((1 . 2) (5 . 8) (9 . 12) (11 . 14)) 8.348 {2/4:6} B:0 5.11090 [ 5.35593] ((1 . 3) (4 . 7) (5 . 8) (13 . 16)) 9.588 {1/2:6} B:0 2.75025 [ 3.75010] ((4 . 14) (7 . 8) (9 . 15) (11 . 16)) 6.081 {0/2:6} B:1 2.81217 [ 3.31055] ((4 . 14) (6 . 5) (7 . 8) (9 . 15) (11 . 16)) 7.695 {1/4:10} B:1 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.3021] [2595, 6099]: Comparing 1isp_A and 1usr_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 35 (7 H + 28 S) secondary structure elements in 1usr_A, of which 32 satisfy the size requirements. 2.20364 [ 6.40015] ((2 . 15) (4 . 16) (5 . 19) (9 . 22) (13 . 24)) 10.047 {0/6:10} B:0 2.28609 [ 5.35953] ((1 . 6) (4 . 9) (6 . 11) (9 . 13) (11 . 18) (13 . 23)) 5.690 {1/5:15} B:0 2.75020 [ 8.00001] ((4 . 6) (6 . 9) (9 . 11) (11 . 14)) 5.720 {0/2:6} B:0 2.75022 [ 8.00001] ((4 . 23) (6 . 25) (9 . 28) (13 . 30)) 5.906 {0/4:6} B:0 2.75032 [ 8.00001] ((1 . 29) (4 . 31) (6 . 33) (9 . 35)) 6.439 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.4788 [and 1/min{score2}: 0.1871] [2595, 6123]: Comparing 1isp_A and 1uvq_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 16 (2 H + 14 S) secondary structure elements in 1uvq_A, of which 7 satisfy the size requirements. 6.71446 [ 6.67462] ((9 . 1) (11 . 4) (13 . 5) (14 . 6)) 8.127 {2/3:6} B:0 SIMILARITY (1/min{score1}): 0.1489 [and 1/min{score2}: 0.1498] [2595, 6142]: Comparing 1isp_A and 1uyp_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 38 (3 H + 35 S) secondary structure elements in 1uyp_A, of which 23 satisfy the size requirements. 2.20052 [ 4.60006] ((1 . 10) (4 . 12) (6 . 14) (9 . 16) (13 . 24)) 6.170 {0/6:10} B:0 2.20065 [ 4.60007] ((4 . 8) (6 . 10) (9 . 12) (11 . 14) (13 . 16)) 6.538 {0/5:10} B:0 2.20097 [ 4.60011] ((1 . 6) (4 . 8) (6 . 10) (9 . 12) (13 . 16)) 7.211 {0/6:10} B:0 2.28658 [ 3.90262] ((1 . 7) (4 . 8) (6 . 10) (9 . 11) (11 . 14) (13 . 16)) 7.135 {1/5:15} B:0 2.50608 [ 4.64060] ((1 . 10) (4 . 12) (6 . 14) (11 . 20) (13 . 24)) 5.901 {1/5:10} B:0 SIMILARITY (1/min{score1}): 0.4544 [and 1/min{score2}: 0.2562] [2595, 6148]: Comparing 1isp_A and 1uz5_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 37 (11 H + 26 S) secondary structure elements in 1uz5_A, of which 6 satisfy the size requirements. 2.75037 [ 1.50230] ((4 . 32) (6 . 34) (7 . 35) (9 . 36)) 6.723 {0/3:6} B:0 3.66644 [ 3.36738] ((4 . 32) (6 . 34) (7 . 35) (9 . 37)) 7.894 {1/3:6} B:0 5.04628 [ 5.00422] ((1 . 33) (4 . 34) (5 . 35) (9 . 36) (11 . 37)) 7.140 {3/6:10} B:0 4.08862 [ 4.00817] ((1 . 34) (5 . 35) (6 . 32) (9 . 36) (11 . 37)) 6.377 {2/5:10} B:1 5.11080 [ 5.01025] ((4 . 32) (6 . 36) (7 . 35) (9 . 37)) 8.413 {2/4:6} B:1 SIMILARITY (1/min{score1}): 0.3989 [and 1/min{score2}: 0.6656] [2595, 6167]: Comparing 1isp_A and 1v3w_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 22 (1 H + 21 S) secondary structure elements in 1v3w_A, of which 12 satisfy the size requirements. 2.75018 [ 3.00014] ((6 . 7) (9 . 10) (11 . 14) (13 . 17)) 5.616 {0/1:6} B:0 2.75027 [ 3.00021] ((6 . 7) (9 . 10) (11 . 14) (13 . 20)) 6.212 {0/1:6} B:0 2.75035 [ 3.00027] ((4 . 4) (6 . 7) (11 . 17) (13 . 20)) 6.627 {0/2:6} B:0 2.75064 [ 3.00049] ((4 . 4) (6 . 10) (9 . 14) (11 . 20)) 7.688 {0/1:6} B:0 2.66432 [ 2.72443] ((1 . 10) (4 . 7) (6 . 12) (9 . 14) (11 . 17) (13 . 20)) 6.709 {2/8:15} B:1 SIMILARITY (1/min{score1}): 0.3753 [and 1/min{score2}: 0.3670] [2595, 6169]: Comparing 1isp_A and 1v4e_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 17 (15 H + 2 S) secondary structure elements in 1v4e_A, of which 14 satisfy the size requirements. 3.13960 [ 3.71285] ((2 . 9) (5 . 12) (7 . 13) (14 . 16)) 15.621 {1/4:6} B:0 SIMILARITY (1/min{score1}): 0.3185 [and 1/min{score2}: 0.2693] [2595, 6173]: Comparing 1isp_A and 1v54_B, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 16 (6 H + 10 S) secondary structure elements in 1v54_B, of which 12 satisfy the size requirements. 2.75008 [ 3.00006] ((1 . 3) (4 . 5) (6 . 8) (9 . 11)) 4.541 {0/3:6} B:0 2.75031 [ 3.00024] ((6 . 3) (9 . 5) (11 . 8) (13 . 11)) 6.416 {0/1:6} B:0 2.75069 [ 3.00053] ((4 . 3) (6 . 5) (9 . 8) (13 . 13)) 7.840 {0/3:6} B:0 3.66627 [ 3.78150] ((9 . 9) (11 . 13) (13 . 15) (14 . 16)) 6.472 {1/3:6} B:0 3.66633 [ 3.78156] ((1 . 3) (4 . 5) (6 . 9) (9 . 13)) 7.124 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.3333] [2595, 6191]: Comparing 1isp_A and 1v7o_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 13 (6 H + 7 S) secondary structure elements in 1v7o_A, of which 10 satisfy the size requirements. 2.75219 [ 2.50292] ((2 . 1) (4 . 3) (7 . 7) (11 . 10)) 10.460 {0/4:6} B:0 2.75233 [ 2.50311] ((1 . 6) (2 . 7) (4 . 10) (6 . 13)) 10.625 {0/3:6} B:0 7.53385 [ 7.52323] ((2 . 5) (4 . 6) (5 . 7) (9 . 12)) 12.089 {3/4:6} B:0 2.75145 [ 2.50193] ((1 . 3) (2 . 1) (7 . 7) (9 . 10)) 9.437 {0/5:6} B:1 2.36265 [ 2.20722] ((1 . 10) (2 . 1) (4 . 9) (5 . 7) (11 . 3)) 5.898 {1/6:10} B:3 SIMILARITY (1/min{score1}): 0.4233 [and 1/min{score2}: 0.4531] [2595, 6192]: Comparing 1isp_A and 1v7r_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 16 (10 H + 6 S) secondary structure elements in 1v7r_A, of which 13 satisfy the size requirements. 2.10397 [ 2.18980] ((1 . 1) (2 . 2) (4 . 3) (7 . 4) (9 . 5) (11 . 10) (13 . 11) (15 . 16)) 6.110 {3/15:28} B:0 2.20042 [ 2.60026] ((1 . 1) (2 . 2) (4 . 3) (11 . 11) (15 . 15)) 5.868 {0/6:10} B:0 2.20065 [ 2.60039] ((1 . 1) (2 . 2) (4 . 3) (13 . 11) (15 . 15)) 6.530 {0/6:10} B:0 2.20152 [ 2.60092] ((2 . 2) (4 . 3) (6 . 5) (13 . 11) (15 . 15)) 8.069 {0/6:10} B:0 2.36573 [ 2.70571] ((4 . 1) (5 . 2) (6 . 3) (7 . 4) (9 . 5)) 10.439 {1/6:10} B:0 SIMILARITY (1/min{score1}): 0.4753 [and 1/min{score2}: 0.4567] [2595, 6215]: Comparing 1isp_A and 1ve9_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 28 (13 H + 15 S) secondary structure elements in 1ve9_A, of which 7 satisfy the size requirements. 3.66623 [ 3.39504] ((4 . 18) (6 . 20) (7 . 22) (9 . 24)) 5.983 {1/3:6} B:0 3.66647 [ 3.39534] ((1 . 17) (4 . 18) (7 . 22) (9 . 24)) 8.116 {1/3:6} B:0 5.02249 [ 5.00375] ((1 . 19) (4 . 18) (6 . 20) (7 . 22) (11 . 17) (13 . 24)) 6.169 {4/8:15} B:2 5.72939 [ 5.71679] ((1 . 19) (4 . 18) (6 . 20) (7 . 22) (9 . 17) (11 . 24)) 6.030 {4/7:15} B:2 SIMILARITY (1/min{score1}): 0.2728 [and 1/min{score2}: 0.2945] [2595, 6225]: Comparing 1isp_A and 1vgy_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 30 (11 H + 19 S) secondary structure elements in 1vgy_A, of which 18 satisfy the size requirements. 2.75026 [ 4.50006] ((2 . 2) (4 . 3) (6 . 5) (11 . 10)) 6.127 {0/2:6} B:0 3.66616 [ 4.80605] ((2 . 9) (4 . 10) (5 . 11) (6 . 12)) 4.264 {1/3:6} B:0 7.53398 [ 7.73230] ((2 . 1) (5 . 2) (6 . 5) (9 . 7)) 13.691 {3/4:6} B:0 10.01428 [10.10099] ((2 . 9) (4 . 10) (5 . 11) (6 . 13)) 7.643 {4/4:6} B:0 10.01430 [10.10101] ((5 . 1) (6 . 3) (7 . 2) (9 . 4)) 9.433 {1/1:6} B:1 SIMILARITY (1/min{score1}): 0.3963 [and 1/min{score2}: 0.3768] [2595, 6228]: Comparing 1isp_A and 1vh3_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 19 (9 H + 10 S) secondary structure elements in 1vh3_A, of which 19 satisfy the size requirements. 2.20004 [ 3.80001] ((4 . 1) (5 . 2) (6 . 3) (7 . 4) (9 . 5)) 3.278 {0/4:10} B:0 2.20051 [ 3.80010] ((1 . 1) (2 . 2) (4 . 3) (5 . 4) (9 . 7)) 6.143 {0/5:10} B:0 2.20062 [ 3.80012] ((1 . 1) (2 . 2) (4 . 3) (5 . 4) (6 . 7)) 6.448 {0/4:10} B:0 2.20075 [ 3.80015] ((2 . 2) (4 . 3) (6 . 5) (9 . 7) (11 . 9)) 6.776 {0/6:10} B:0 2.29247 [ 3.81897] ((1 . 1) (2 . 2) (5 . 6) (6 . 7) (7 . 8)) 6.605 {1/7:10} B:0 SIMILARITY (1/min{score1}): 0.6363 [and 1/min{score2}: 0.4398] [2595, 6234]: Comparing 1isp_A and 1vhe_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 30 (12 H + 18 S) secondary structure elements in 1vhe_A, of which 8 satisfy the size requirements. 2.75062 [ 2.00161] ((1 . 7) (2 . 8) (4 . 10) (9 . 15)) 7.630 {0/4:6} B:0 2.75063 [ 2.00163] ((1 . 7) (2 . 8) (4 . 10) (6 . 15)) 7.652 {0/3:6} B:0 3.66663 [ 3.43705] ((4 . 6) (5 . 8) (6 . 9) (9 . 13)) 8.944 {1/3:6} B:0 5.11125 [ 5.03232] ((4 . 7) (5 . 8) (7 . 14) (9 . 15)) 12.010 {2/4:6} B:0 3.66630 [ 3.43665] ((1 . 7) (2 . 8) (4 . 13) (6 . 9)) 6.815 {1/3:6} B:1 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.4996] [2595, 6238]: Comparing 1isp_A and 1vhm_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 11 (5 H + 6 S) secondary structure elements in 1vhm_A, of which 10 satisfy the size requirements. 2.75044 [ 2.50059] ((2 . 2) (4 . 3) (6 . 5) (9 . 8)) 7.000 {0/3:6} B:0 2.75143 [ 2.50190] ((2 . 1) (9 . 7) (11 . 9) (14 . 10)) 9.400 {0/4:6} B:0 2.75177 [ 2.50235] ((2 . 1) (9 . 7) (13 . 9) (14 . 10)) 9.910 {0/4:6} B:0 2.92536 [ 2.72457] ((1 . 4) (2 . 6) (6 . 9) (7 . 10)) 7.283 {1/5:6} B:0 3.66693 [ 3.57134] ((2 . 1) (5 . 2) (6 . 3) (11 . 7)) 10.068 {1/3:6} B:0 SIMILARITY (1/min{score1}): 0.3856 [and 1/min{score2}: 0.3999] [2595, 6243]: Comparing 1isp_A and 1vhr_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 13 (8 H + 5 S) secondary structure elements in 1vhr_A, of which 12 satisfy the size requirements. 2.20115 [ 2.40088] ((1 . 3) (5 . 5) (6 . 6) (7 . 9) (9 . 10)) 7.525 {0/5:10} B:0 2.20119 [ 2.40092] ((2 . 5) (5 . 7) (6 . 8) (7 . 9) (9 . 10)) 7.592 {0/4:10} B:0 2.20150 [ 2.40115] ((1 . 3) (2 . 5) (5 . 7) (7 . 9) (9 . 10)) 8.043 {0/5:10} B:0 2.36293 [ 2.52931] ((5 . 5) (6 . 6) (9 . 8) (11 . 10) (14 . 11)) 6.838 {1/6:10} B:0 2.36370 [ 2.52994] ((5 . 5) (6 . 6) (9 . 8) (13 . 10) (14 . 11)) 8.340 {1/6:10} B:0 SIMILARITY (1/min{score1}): 0.6195 [and 1/min{score2}: 0.5722] [2595, 6251]: Comparing 1isp_A and 1vhy_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 21 (8 H + 13 S) secondary structure elements in 1vhy_A, of which 10 satisfy the size requirements. 2.20076 [ 2.00102] ((5 . 11) (7 . 14) (9 . 15) (11 . 17) (15 . 20)) 6.798 {0/4:10} B:0 2.20107 [ 2.00142] ((1 . 8) (2 . 9) (4 . 10) (5 . 11) (9 . 17)) 7.389 {0/3:10} B:0 2.20130 [ 2.00173] ((1 . 8) (2 . 9) (4 . 10) (5 . 11) (9 . 15)) 7.762 {0/5:10} B:0 2.20141 [ 2.00187] ((4 . 10) (5 . 11) (9 . 15) (11 . 17) (15 . 20)) 7.918 {0/6:10} B:0 2.20247 [ 2.00329] ((4 . 8) (5 . 9) (9 . 15) (11 . 17) (15 . 20)) 9.117 {0/2:10} B:0 SIMILARITY (1/min{score1}): 0.7647 [and 1/min{score2}: 0.8196] [2595, 6258]: Comparing 1isp_A and 1vi6_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 15 (8 H + 7 S) secondary structure elements in 1vi6_A, of which 13 satisfy the size requirements. 1.92718 [ 2.22559] ((4 . 7) (5 . 8) (6 . 10) (9 . 12) (11 . 13) (14 . 14)) 7.765 {1/8:15} B:0 2.20010 [ 2.60006] ((6 . 9) (9 . 10) (11 . 12) (13 . 13) (15 . 14)) 4.106 {0/1:10} B:0 2.20098 [ 2.60059] ((5 . 8) (9 . 10) (11 . 12) (13 . 13) (14 . 14)) 7.233 {0/6:10} B:0 2.20171 [ 2.60104] ((4 . 7) (5 . 8) (9 . 10) (11 . 13) (14 . 14)) 8.318 {0/5:10} B:0 2.20478 [ 2.60290] ((7 . 5) (9 . 7) (11 . 10) (13 . 12) (15 . 14)) 10.756 {0/0:10} B:0 SIMILARITY (1/min{score1}): 0.8063 [and 1/min{score2}: 0.6871] [2595, 6261]: Comparing 1isp_A and 1vi9_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 26 (13 H + 13 S) secondary structure elements in 1vi9_A, of which 19 satisfy the size requirements. 1.83342 [ 3.16668] ((1 . 1) (2 . 2) (4 . 3) (5 . 7) (6 . 9) (11 . 11)) 3.466 {0/5:15} B:0 1.83344 [ 3.16669] ((1 . 1) (2 . 2) (4 . 3) (5 . 7) (9 . 9) (11 . 11)) 3.638 {0/5:15} B:0 1.92605 [ 3.18590] ((1 . 1) (2 . 2) (4 . 3) (9 . 9) (11 . 11) (14 . 17)) 6.252 {1/8:15} B:0 2.20027 [ 3.80005] ((5 . 10) (6 . 11) (7 . 14) (11 . 19) (15 . 23)) 5.247 {0/3:10} B:0 2.20113 [ 3.80022] ((2 . 10) (4 . 11) (5 . 14) (7 . 17) (13 . 22)) 7.491 {0/7:10} B:0 SIMILARITY (1/min{score1}): 0.7643 [and 1/min{score2}: 0.4696] [2595, 6266]: Comparing 1isp_A and 1vim_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 13 (8 H + 5 S) secondary structure elements in 1vim_A, of which 13 satisfy the size requirements. 1.92693 [ 2.22543] ((4 . 3) (5 . 4) (6 . 6) (9 . 8) (11 . 10) (14 . 12)) 7.498 {1/8:15} B:0 2.20184 [ 2.60111] ((2 . 1) (5 . 4) (9 . 6) (11 . 10) (15 . 12)) 8.463 {0/6:10} B:0 2.20263 [ 2.60160] ((2 . 1) (4 . 3) (5 . 4) (9 . 8) (11 . 10)) 9.265 {0/7:10} B:0 2.20908 [ 2.60552] ((5 . 1) (7 . 2) (9 . 3) (11 . 6) (13 . 8)) 12.638 {0/4:10} B:0 2.50584 [ 2.80267] ((2 . 4) (4 . 5) (5 . 7) (6 . 8) (9 . 10)) 3.811 {1/5:10} B:0 SIMILARITY (1/min{score1}): 0.7936 [and 1/min{score2}: 0.6813] [2595, 6268]: Comparing 1isp_A and 1vin, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 16 (16 H + 0 S) secondary structure elements in 1vin, of which 7 satisfy the size requirements. 2.75151 [ 1.75585] ((5 . 8) (7 . 9) (14 . 13) (15 . 14)) 9.532 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.3634 [and 1/min{score2}: 0.5695] [2595, 6270]: Comparing 1isp_A and 1vio_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 23 (8 H + 15 S) secondary structure elements in 1vio_A, of which 12 satisfy the size requirements. 2.75060 [ 3.00046] ((6 . 13) (7 . 14) (13 . 18) (14 . 19)) 7.564 {0/2:6} B:0 2.75286 [ 3.00220] ((9 . 9) (11 . 13) (13 . 15) (15 . 16)) 11.180 {0/0:6} B:0 5.11083 [ 5.15484] ((2 . 16) (4 . 18) (5 . 19) (6 . 20)) 8.801 {2/4:6} B:0 5.11092 [ 5.15493] ((1 . 15) (2 . 16) (4 . 18) (5 . 19)) 9.793 {1/2:6} B:0 6.71449 [ 6.73406] ((2 . 14) (4 . 15) (5 . 16) (6 . 17)) 8.949 {2/3:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.3333] [2595, 6271]: Comparing 1isp_A and 1viu_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 14 (4 H + 10 S) secondary structure elements in 1viu_A, of which 14 satisfy the size requirements. 2.75064 [ 3.50031] ((1 . 8) (2 . 9) (4 . 10) (7 . 14)) 7.689 {0/4:6} B:0 2.75806 [ 3.50392] ((1 . 1) (4 . 3) (5 . 6) (6 . 7)) 14.494 {0/2:6} B:0 2.75960 [ 3.50467] ((1 . 1) (4 . 3) (6 . 7) (14 . 13)) 15.143 {0/2:6} B:0 2.76255 [ 3.50612] ((1 . 1) (5 . 6) (6 . 7) (14 . 13)) 16.202 {0/2:6} B:0 3.13731 [ 3.71146] ((4 . 1) (6 . 3) (7 . 6) (15 . 13)) 14.225 {1/4:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.3158] [2595, 6273]: Comparing 1isp_A and 1vj0_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 33 (13 H + 20 S) secondary structure elements in 1vj0_A, of which 13 satisfy the size requirements. 2.75030 [ 3.25018] ((4 . 1) (6 . 4) (9 . 6) (11 . 7)) 6.360 {0/1:6} B:0 2.75123 [ 3.25074] ((6 . 1) (9 . 2) (11 . 4) (13 . 6)) 9.046 {0/0:6} B:0 3.66640 [ 3.91563] ((2 . 5) (4 . 4) (6 . 7) (11 . 12)) 7.646 {1/3:6} B:1 5.02264 [ 5.04370] ((1 . 1) (4 . 2) (5 . 32) (9 . 6) (11 . 7) (13 . 13)) 9.036 {3/6:15} B:1 3.48237 [ 3.60733] ((4 . 1) (5 . 32) (6 . 2) (11 . 12) (13 . 3)) 10.400 {2/6:10} B:2 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.3077] [2595, 6294]: Comparing 1isp_A and 1vjr_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 28 (13 H + 15 S) secondary structure elements in 1vjr_A, of which 19 satisfy the size requirements. 1.22282 [ 2.11123] ((1 . 2) (2 . 5) (4 . 6) (5 . 21) (6 . 23) (7 . 24) (9 . 25) (11 . 27) (15 . 28)) 4.106 {0/15:36} B:0 2.20032 [ 3.80006] ((1 . 2) (4 . 6) (5 . 7) (6 . 9) (15 . 21)) 5.476 {0/5:10} B:0 2.20078 [ 3.80015] ((1 . 23) (2 . 24) (4 . 25) (5 . 26) (6 . 27)) 6.822 {0/2:10} B:0 2.20131 [ 3.80025] ((2 . 10) (4 . 11) (5 . 12) (6 . 16) (14 . 24)) 7.775 {0/6:10} B:0 2.20332 [ 3.80065] ((7 . 19) (9 . 23) (11 . 25) (13 . 27) (14 . 28)) 9.820 {0/3:10} B:0 SIMILARITY (1/min{score1}): 0.9079 [and 1/min{score2}: 0.5262] [2595, 6306]: Comparing 1isp_A and 1vk6_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 23 (6 H + 17 S) secondary structure elements in 1vk6_A, of which 9 satisfy the size requirements. 3.66625 [ 3.49442] ((4 . 16) (5 . 18) (6 . 19) (14 . 23)) 6.187 {1/3:6} B:0 3.66669 [ 3.49493] ((1 . 15) (5 . 18) (6 . 19) (11 . 22)) 9.197 {1/3:6} B:0 5.11073 [ 5.05056] ((2 . 18) (4 . 19) (6 . 22) (7 . 23)) 7.089 {2/4:6} B:0 3.13258 [ 2.83650] ((1 . 19) (2 . 18) (4 . 21) (7 . 23)) 7.262 {1/4:6} B:1 SIMILARITY (1/min{score1}): 0.3192 [and 1/min{score2}: 0.3525] [2595, 6309]: Comparing 1isp_A and 1vlb_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 65 (35 H + 30 S) secondary structure elements in 1vlb_A, of which 8 satisfy the size requirements. 2.75032 [ 2.00082] ((2 . 16) (4 . 17) (5 . 19) (6 . 20)) 6.445 {0/4:6} B:0 2.75037 [ 2.00096] ((1 . 17) (2 . 19) (4 . 20) (9 . 25)) 6.708 {0/0:6} B:0 2.75052 [ 2.00135] ((1 . 17) (2 . 19) (4 . 20) (9 . 27)) 7.290 {0/0:6} B:0 2.75075 [ 2.00196] ((1 . 17) (5 . 19) (9 . 25) (11 . 27)) 8.006 {0/0:6} B:0 2.75094 [ 2.00243] ((4 . 17) (5 . 19) (6 . 20) (11 . 25)) 8.454 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.3990 [and 1/min{score2}: 0.5000] [2595, 6311]: Comparing 1isp_A and 1vmo_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 14 (0 H + 14 S) secondary structure elements in 1vmo_A, of which 8 satisfy the size requirements. 2.75073 [ 2.00190] ((6 . 4) (9 . 5) (11 . 9) (13 . 10)) 7.950 {0/0:6} B:0 2.75106 [ 2.00275] ((1 . 1) (9 . 9) (11 . 11) (13 . 13)) 8.720 {0/3:6} B:0 2.75224 [ 2.00581] ((6 . 5) (9 . 9) (11 . 10) (13 . 13)) 10.519 {0/0:6} B:0 3.66619 [ 3.43652] ((4 . 1) (9 . 9) (11 . 10) (13 . 11)) 5.281 {1/3:6} B:0 5.11074 [ 5.03179] ((1 . 1) (6 . 9) (9 . 10) (11 . 13)) 7.368 {1/2:6} B:0 SIMILARITY (1/min{score1}): 0.4542 [and 1/min{score2}: 0.6233] [2595, 6326]: Comparing 1isp_A and 1wba, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 13 (0 H + 13 S) secondary structure elements in 1wba, of which 12 satisfy the size requirements. NO SIMILARITY! [2595, 6329]: Comparing 1isp_A and 1wer, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 20 (20 H + 0 S) secondary structure elements in 1wer, of which 18 satisfy the size requirements. 3.13510 [ 4.60444] ((5 . 1) (7 . 2) (14 . 6) (15 . 7)) 12.322 {1/4:6} B:0 SIMILARITY (1/min{score1}): 0.3190 [and 1/min{score2}: 0.2172] [2595, 6338]: Comparing 1isp_A and 1wwc_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 8 (1 H + 7 S) secondary structure elements in 1wwc_A, of which 6 satisfy the size requirements. 2.75174 [ 1.51062] ((6 . 1) (9 . 2) (11 . 5) (13 . 8)) 9.872 {0/0:6} B:0 3.48225 [ 3.34830] ((1 . 1) (6 . 5) (9 . 8) (11 . 7) (13 . 2)) 10.105 {1/3:10} B:2 SIMILARITY (1/min{score1}): 0.3634 [and 1/min{score2}: 0.6620] [2595, 6344]: Comparing 1isp_A and 1xff_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 21 (6 H + 15 S) secondary structure elements in 1xff_A, of which 20 satisfy the size requirements. 2.20066 [ 4.00011] ((1 . 8) (2 . 10) (6 . 13) (9 . 17) (11 . 19)) 6.541 {0/6:10} B:0 2.75009 [ 5.00001] ((4 . 1) (5 . 2) (6 . 3) (11 . 7)) 4.691 {0/2:6} B:0 2.75032 [ 5.00005] ((5 . 11) (6 . 12) (11 . 18) (13 . 21)) 6.480 {0/2:6} B:0 2.75059 [ 5.00010] ((6 . 4) (9 . 6) (11 . 8) (14 . 10)) 7.519 {0/2:6} B:0 2.75062 [ 5.00010] ((9 . 1) (11 . 3) (13 . 4) (15 . 5)) 7.634 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.4544 [and 1/min{score2}: 0.2800] [2595, 6345]: Comparing 1isp_A and 1xgs_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 24 (7 H + 17 S) secondary structure elements in 1xgs_A, of which 14 satisfy the size requirements. 2.75020 [ 3.50010] ((2 . 2) (4 . 4) (6 . 7) (7 . 8)) 5.751 {0/3:6} B:0 2.75060 [ 3.50029] ((2 . 2) (4 . 5) (6 . 7) (7 . 8)) 7.564 {0/2:6} B:0 5.11088 [ 5.27656] ((2 . 1) (5 . 2) (6 . 4) (11 . 7)) 9.457 {2/4:6} B:0 6.71459 [ 6.79000] ((5 . 1) (9 . 4) (13 . 7) (14 . 8)) 10.966 {2/3:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.2857] [2595, 6348]: Comparing 1isp_A and 1xo1_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 21 (15 H + 6 S) secondary structure elements in 1xo1_A, of which 11 satisfy the size requirements. 1.57155 [ 1.57155] ((1 . 1) (2 . 3) (4 . 4) (5 . 8) (6 . 9) (7 . 10) (9 . 11)) 3.313 {0/10:21} B:0 1.83340 [ 1.83340] ((1 . 1) (2 . 3) (4 . 4) (5 . 8) (6 . 9) (9 . 11)) 3.245 {0/7:15} B:0 2.20011 [ 2.20011] ((1 . 1) (2 . 3) (4 . 4) (9 . 9) (11 . 11)) 4.216 {0/5:10} B:0 2.75002 [ 2.75002] ((1 . 4) (5 . 8) (6 . 9) (9 . 11)) 3.361 {0/2:6} B:0 2.75031 [ 2.75031] ((2 . 8) (4 . 9) (5 . 10) (6 . 11)) 6.400 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.6363 [and 1/min{score2}: 0.6363] [2595, 6355]: Comparing 1isp_A and 1y6h_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 16 (7 H + 9 S) secondary structure elements in 1y6h_A, of which 13 satisfy the size requirements. 2.75049 [ 3.25030] ((7 . 5) (9 . 6) (13 . 10) (15 . 13)) 7.191 {0/0:6} B:0 2.75066 [ 3.25040] ((2 . 3) (4 . 4) (6 . 7) (13 . 15)) 7.750 {0/5:6} B:0 2.75072 [ 3.25044] ((4 . 4) (6 . 7) (9 . 9) (13 . 15)) 7.928 {0/4:6} B:0 2.75090 [ 3.25055] ((2 . 3) (4 . 4) (6 . 7) (9 . 9)) 8.369 {0/4:6} B:0 3.13582 [ 3.50586] ((4 . 4) (6 . 8) (11 . 12) (13 . 15)) 13.041 {1/4:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.3077] [2595, 6356]: Comparing 1isp_A and 1yac_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 17 (11 H + 6 S) secondary structure elements in 1yac_A, of which 15 satisfy the size requirements. 2.20012 [ 3.00005] ((4 . 9) (5 . 10) (6 . 11) (7 . 12) (9 . 13)) 4.317 {0/2:10} B:0 2.20026 [ 3.00010] ((4 . 6) (5 . 8) (6 . 9) (7 . 10) (9 . 11)) 5.192 {0/6:10} B:0 2.20029 [ 3.00012] ((1 . 4) (4 . 6) (5 . 8) (7 . 10) (9 . 11)) 5.351 {0/6:10} B:0 2.20073 [ 3.00029] ((6 . 1) (7 . 3) (9 . 4) (11 . 6) (15 . 10)) 6.728 {0/1:10} B:0 2.20083 [ 3.00033] ((2 . 8) (4 . 9) (6 . 11) (7 . 12) (9 . 13)) 6.943 {0/4:10} B:0 SIMILARITY (1/min{score1}): 0.8000 [and 1/min{score2}: 0.6517] [2595, 6359]: Comparing 1isp_A and 1ycs_B, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 15 (10 H + 5 S) secondary structure elements in 1ycs_B, of which 7 satisfy the size requirements. NO SIMILARITY! [2595, 6369]: Comparing 1isp_A and 1zfj_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 39 (19 H + 20 S) secondary structure elements in 1zfj_A, of which 26 satisfy the size requirements. 1.83354 [ 4.33335] ((4 . 20) (5 . 21) (6 . 22) (9 . 24) (11 . 26) (13 . 29)) 4.257 {0/8:15} B:0 1.83399 [ 4.33338] ((2 . 23) (4 . 24) (5 . 25) (6 . 26) (9 . 29) (11 . 31)) 5.707 {0/7:15} B:0 1.83409 [ 4.33339] ((1 . 24) (2 . 25) (4 . 26) (5 . 28) (6 . 29) (9 . 31)) 5.920 {0/6:15} B:0 1.83466 [ 4.33343] ((1 . 22) (2 . 23) (4 . 24) (5 . 25) (6 . 26) (9 . 29)) 6.808 {0/5:15} B:0 2.20033 [ 5.20002] ((1 . 20) (5 . 25) (6 . 26) (9 . 29) (11 . 31)) 5.504 {0/4:10} B:0 SIMILARITY (1/min{score1}): 0.9068 [and 1/min{score2}: 0.3846] [2595, 6376]: Comparing 1isp_A and 1zpd_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 46 (26 H + 20 S) secondary structure elements in 1zpd_A, of which 13 satisfy the size requirements. 1.83344 [ 2.16673] ((1 . 17) (2 . 18) (4 . 19) (6 . 24) (9 . 26) (11 . 28)) 3.635 {0/6:15} B:0 2.20077 [ 2.60047] ((1 . 17) (4 . 19) (6 . 21) (9 . 24) (11 . 28)) 6.818 {0/3:10} B:0 2.29192 [ 2.65735] ((4 . 17) (5 . 18) (6 . 19) (7 . 20) (9 . 21)) 3.482 {1/7:10} B:0 2.75012 [ 3.25007] ((5 . 16) (6 . 17) (7 . 18) (9 . 19)) 5.057 {0/3:6} B:0 2.75077 [ 3.25047] ((1 . 19) (2 . 20) (6 . 26) (7 . 29)) 8.062 {0/4:6} B:0 SIMILARITY (1/min{score1}): 0.6196 [and 1/min{score2}: 0.5309] [2595, 6384]: Comparing 1isp_A and 2a0b, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 7 (7 H + 0 S) secondary structure elements in 2a0b, of which 7 satisfy the size requirements. NO SIMILARITY! [2595, 6391]: Comparing 1isp_A and 2ahj_B, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 14 (9 H + 5 S) secondary structure elements in 2ahj_B, of which 13 satisfy the size requirements. 5.11092 [ 5.20984] ((2 . 7) (4 . 8) (5 . 11) (6 . 12)) 9.835 {2/4:6} B:0 2.75071 [ 3.25043] ((1 . 10) (4 . 8) (5 . 11) (6 . 12)) 7.898 {0/2:6} B:1 SIMILARITY (1/min{score1}): 0.3635 [and 1/min{score2}: 0.3077] [2595, 6392]: Comparing 1isp_A and 2ak3_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 16 (9 H + 7 S) secondary structure elements in 2ak3_A, of which 13 satisfy the size requirements. 1.66825 [ 1.82708] ((1 . 1) (2 . 2) (4 . 7) (5 . 8) (6 . 9) (7 . 14) (9 . 15) (15 . 16)) 4.442 {2/14:28} B:0 1.71007 [ 1.94629] ((1 . 1) (2 . 2) (4 . 7) (5 . 8) (6 . 9) (9 . 15) (14 . 16)) 5.338 {1/8:21} B:0 2.20006 [ 2.60003] ((1 . 3) (5 . 6) (6 . 7) (9 . 9) (15 . 16)) 3.559 {0/4:10} B:0 2.20010 [ 2.60006] ((1 . 1) (4 . 3) (5 . 6) (6 . 7) (9 . 9)) 4.107 {0/2:10} B:0 2.20011 [ 2.60007] ((1 . 1) (2 . 2) (4 . 3) (6 . 7) (9 . 9)) 4.160 {0/3:10} B:0 SIMILARITY (1/min{score1}): 0.8241 [and 1/min{score2}: 0.7280] [2595, 6399]: Comparing 1isp_A and 2bbk_H, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 33 (3 H + 30 S) secondary structure elements in 2bbk_H, of which 29 satisfy the size requirements. 1.83479 [ 4.83341] ((1 . 10) (4 . 11) (6 . 14) (9 . 18) (11 . 19) (13 . 26)) 6.967 {0/1:15} B:0 2.20044 [ 5.80002] ((1 . 14) (6 . 18) (9 . 19) (11 . 25) (13 . 27)) 5.935 {0/2:10} B:0 2.20062 [ 5.80003] ((4 . 20) (6 . 25) (9 . 27) (11 . 29) (13 . 31)) 6.461 {0/5:10} B:0 2.75007 [ 7.25000] ((6 . 26) (9 . 28) (11 . 30) (13 . 32)) 4.412 {0/1:6} B:0 2.75011 [ 7.25001] ((6 . 26) (9 . 27) (11 . 30) (13 . 32)) 4.920 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.5450 [and 1/min{score2}: 0.2398] [2595, 6403]: Comparing 1isp_A and 2bc2_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 18 (6 H + 12 S) secondary structure elements in 2bc2_A, of which 17 satisfy the size requirements. 2.20014 [ 3.40004] ((1 . 5) (2 . 6) (4 . 7) (11 . 15) (13 . 17)) 4.434 {0/6:10} B:0 2.20016 [ 3.40004] ((4 . 5) (5 . 6) (6 . 7) (7 . 9) (9 . 10)) 4.612 {0/5:10} B:0 2.20019 [ 3.40005] ((4 . 3) (5 . 6) (6 . 7) (7 . 9) (9 . 10)) 4.817 {0/7:10} B:0 2.20047 [ 3.40013] ((1 . 5) (2 . 6) (4 . 7) (6 . 10) (11 . 15)) 6.026 {0/4:10} B:0 2.20050 [ 3.40014] ((4 . 3) (6 . 5) (9 . 7) (11 . 10) (13 . 13)) 6.114 {0/4:10} B:0 SIMILARITY (1/min{score1}): 0.5990 [and 1/min{score2}: 0.4491] [2595, 6434]: Comparing 1isp_A and 2e2c, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 9 (5 H + 4 S) secondary structure elements in 2e2c, of which 9 satisfy the size requirements. 2.75004 [ 2.25007] ((1 . 2) (6 . 3) (9 . 4) (15 . 7)) 3.795 {0/2:6} B:0 2.75160 [ 2.25292] ((2 . 1) (4 . 2) (6 . 4) (15 . 9)) 9.672 {0/3:6} B:0 2.75178 [ 2.25325] ((1 . 2) (4 . 4) (5 . 6) (7 . 7)) 9.931 {0/3:6} B:0 4.20687 [ 4.09663] ((4 . 3) (6 . 5) (7 . 6) (14 . 9)) 5.989 {2/5:6} B:0 5.11074 [ 5.05057] ((1 . 2) (4 . 3) (6 . 5) (7 . 6)) 7.350 {2/4:6} B:0 SIMILARITY (1/min{score1}): 0.3990 [and 1/min{score2}: 0.4444] [2595, 6461]: Comparing 1isp_A and 2gmf_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 7 (5 H + 2 S) secondary structure elements in 2gmf_A, of which 7 satisfy the size requirements. 2.75132 [ 1.75508] ((5 . 1) (7 . 2) (13 . 6) (14 . 7)) 9.204 {0/4:6} B:0 2.75157 [ 1.75607] ((5 . 1) (7 . 2) (11 . 6) (14 . 7)) 9.623 {0/4:6} B:0 SIMILARITY (1/min{score1}): 0.3635 [and 1/min{score2}: 0.5698] [2595, 6462]: Comparing 1isp_A and 2gsa_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 34 (20 H + 14 S) secondary structure elements in 2gsa_A, of which 29 satisfy the size requirements. 2.20088 [ 5.80005] ((2 . 17) (4 . 18) (5 . 19) (6 . 20) (9 . 22)) 7.040 {0/5:10} B:0 2.20091 [ 5.80005] ((1 . 12) (2 . 17) (4 . 18) (5 . 19) (6 . 20)) 7.107 {0/2:10} B:0 2.20123 [ 5.80007] ((1 . 16) (2 . 17) (4 . 18) (5 . 19) (6 . 20)) 7.650 {0/3:10} B:0 2.75020 [ 7.25001] ((2 . 9) (4 . 10) (11 . 18) (13 . 20)) 5.753 {0/4:6} B:0 2.75036 [ 7.25002] ((1 . 18) (4 . 20) (5 . 21) (6 . 22)) 6.645 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.7193 [and 1/min{score2}: 0.3089] [2595, 6476]: Comparing 1isp_A and 2hts, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 9 (5 H + 4 S) secondary structure elements in 2hts, of which 7 satisfy the size requirements. NO SIMILARITY! [2595, 6498]: Comparing 1isp_A and 2nap_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 60 (31 H + 29 S) secondary structure elements in 2nap_A, of which 38 satisfy the size requirements. 2.20041 [ 7.60001] ((7 . 15) (9 . 16) (11 . 19) (13 . 21) (14 . 22)) 5.807 {0/3:10} B:0 2.20058 [ 7.60001] ((1 . 19) (4 . 21) (5 . 22) (11 . 29) (13 . 31)) 6.355 {0/3:10} B:0 2.20070 [ 7.60002] ((5 . 14) (9 . 16) (11 . 19) (13 . 21) (14 . 22)) 6.642 {0/5:10} B:0 2.20084 [ 7.60002] ((5 . 14) (9 . 16) (11 . 19) (13 . 21) (15 . 27)) 6.962 {0/3:10} B:0 2.75004 [ 9.50000] ((1 . 19) (4 . 21) (9 . 29) (13 . 31)) 3.956 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.8155 [and 1/min{score2}: 0.2751] [2595, 6506]: Comparing 1isp_A and 2pgd, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 30 (22 H + 8 S) secondary structure elements in 2pgd, of which 13 satisfy the size requirements. 3.13573 [ 3.50580] ((2 . 16) (7 . 20) (14 . 23) (15 . 24)) 12.961 {1/4:6} B:0 SIMILARITY (1/min{score1}): 0.3189 [and 1/min{score2}: 0.2852] [2595, 6520]: Comparing 1isp_A and 2pva_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 29 (7 H + 22 S) secondary structure elements in 2pva_A, of which 23 satisfy the size requirements. 2.75005 [ 5.75001] ((4 . 8) (7 . 12) (9 . 14) (11 . 16)) 4.035 {0/3:6} B:0 2.75008 [ 5.75001] ((9 . 3) (11 . 6) (13 . 9) (15 . 11)) 4.616 {0/0:6} B:0 2.75016 [ 5.75002] ((1 . 2) (4 . 6) (6 . 9) (13 . 15)) 5.460 {0/3:6} B:0 2.75022 [ 5.75002] ((4 . 8) (7 . 12) (9 . 13) (11 . 16)) 5.895 {0/2:6} B:0 2.75028 [ 5.75003] ((9 . 3) (11 . 8) (13 . 9) (15 . 11)) 6.249 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.4545 [and 1/min{score2}: 0.2541] [2595, 6536]: Comparing 1isp_A and 2sqc_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 37 (32 H + 5 S) secondary structure elements in 2sqc_A, of which 16 satisfy the size requirements. 2.92638 [ 4.06163] ((2 . 29) (5 . 30) (11 . 35) (14 . 37)) 9.876 {1/5:6} B:0 3.13311 [ 4.14494] ((2 . 33) (5 . 30) (7 . 32) (14 . 37)) 9.151 {1/4:6} B:1 4.35858 [ 4.58602] ((2 . 33) (5 . 30) (7 . 32) (14 . 37) (15 . 29)) 9.198 {3/7:10} B:2 SIMILARITY (1/min{score1}): 0.3417 [and 1/min{score2}: 0.2462] [2595, 6539]: Comparing 1isp_A and 2tbd, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 10 (4 H + 6 S) secondary structure elements in 2tbd, of which 10 satisfy the size requirements. 2.75005 [ 2.50006] ((1 . 5) (2 . 7) (4 . 8) (5 . 9)) 4.004 {0/2:6} B:0 2.75007 [ 2.50010] ((2 . 1) (4 . 2) (5 . 3) (6 . 4)) 4.472 {0/2:6} B:0 2.75101 [ 2.50134] ((4 . 5) (5 . 7) (6 . 8) (9 . 10)) 8.612 {0/3:6} B:0 2.75127 [ 2.50168] ((5 . 1) (6 . 2) (7 . 3) (9 . 4)) 9.116 {0/1:6} B:0 2.75198 [ 2.50263] ((5 . 1) (6 . 2) (11 . 5) (13 . 8)) 10.192 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.4545 [and 1/min{score2}: 0.5000] [2595, 6540]: Comparing 1isp_A and 2tbv_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 22 (2 H + 20 S) secondary structure elements in 2tbv_A, of which 16 satisfy the size requirements. 2.75017 [ 4.00006] ((1 . 16) (4 . 18) (6 . 21) (9 . 22)) 5.527 {0/2:6} B:0 2.75169 [ 4.00055] ((7 . 8) (9 . 9) (11 . 11) (13 . 12)) 9.798 {0/0:6} B:0 2.75201 [ 4.00065] ((6 . 16) (9 . 19) (11 . 21) (13 . 22)) 10.230 {0/1:6} B:0 2.75244 [ 4.00079] ((4 . 11) (9 . 17) (11 . 19) (13 . 21)) 10.746 {0/3:6} B:0 2.75522 [ 4.00170] ((1 . 11) (6 . 17) (9 . 19) (11 . 21)) 12.997 {0/2:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.2500] [2595, 6548]: Comparing 1isp_A and 2trc_P, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 15 (10 H + 5 S) secondary structure elements in 2trc_P, of which 13 satisfy the size requirements. 2.75006 [ 3.25004] ((1 . 7) (2 . 8) (4 . 9) (6 . 13)) 4.230 {0/2:6} B:0 2.75006 [ 3.25004] ((1 . 5) (2 . 6) (4 . 7) (6 . 9)) 4.336 {0/1:6} B:0 2.75025 [ 3.25015] ((7 . 6) (9 . 7) (11 . 9) (13 . 13)) 6.077 {0/0:6} B:0 3.66810 [ 3.91703] ((7 . 4) (11 . 7) (13 . 9) (14 . 10)) 12.624 {1/3:6} B:0 5.04636 [ 5.08914] ((6 . 7) (7 . 8) (9 . 9) (11 . 13) (14 . 15)) 8.469 {2/4:10} B:0 SIMILARITY (1/min{score1}): 0.4545 [and 1/min{score2}: 0.4026] [2595, 6553]: Comparing 1isp_A and 2uag_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 40 (20 H + 20 S) secondary structure elements in 2uag_A, of which 15 satisfy the size requirements. 1.57161 [ 2.14293] ((1 . 11) (2 . 12) (4 . 13) (6 . 17) (9 . 20) (11 . 22) (15 . 27)) 3.695 {0/8:21} B:0 1.57200 [ 2.14308] ((1 . 11) (2 . 12) (4 . 13) (6 . 15) (11 . 20) (13 . 23) (15 . 27)) 4.910 {0/8:21} B:0 1.83349 [ 2.50006] ((4 . 13) (6 . 15) (7 . 16) (9 . 17) (11 . 20) (15 . 27)) 4.015 {0/5:15} B:0 1.83352 [ 2.50008] ((1 . 11) (2 . 12) (4 . 15) (6 . 17) (9 . 20) (13 . 25)) 4.192 {0/6:15} B:0 1.83353 [ 2.50008] ((6 . 15) (7 . 16) (9 . 17) (11 . 20) (13 . 22) (15 . 27)) 4.219 {0/2:15} B:0 SIMILARITY (1/min{score1}): 0.9083 [and 1/min{score2}: 0.7086] [2595, 6555]: Comparing 1isp_A and 2viu_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 35 (4 H + 31 S) secondary structure elements in 2viu_A, of which 29 satisfy the size requirements. 2.75032 [ 7.25002] ((4 . 13) (6 . 17) (9 . 20) (11 . 23)) 6.483 {0/3:6} B:0 2.75047 [ 7.25003] ((1 . 17) (4 . 20) (6 . 23) (9 . 25)) 7.130 {0/0:6} B:0 2.75059 [ 7.25003] ((4 . 13) (9 . 20) (11 . 23) (13 . 25)) 7.531 {0/3:6} B:0 2.75106 [ 7.25006] ((7 . 21) (9 . 22) (11 . 24) (13 . 26)) 8.717 {0/0:6} B:0 2.75124 [ 7.25007] ((2 . 12) (4 . 13) (6 . 17) (9 . 20)) 9.073 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.4544 [and 1/min{score2}: 0.2366] [2595, 6561]: Comparing 1isp_A and 3cla, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 16 (6 H + 10 S) secondary structure elements in 3cla, of which 15 satisfy the size requirements. 2.75007 [ 3.75003] ((2 . 5) (4 . 9) (6 . 12) (9 . 13)) 4.352 {0/4:6} B:0 2.75053 [ 3.75021] ((2 . 2) (6 . 8) (11 . 12) (13 . 13)) 7.318 {0/4:6} B:0 2.75143 [ 3.75056] ((5 . 5) (6 . 9) (11 . 12) (13 . 13)) 9.396 {0/3:6} B:0 2.75187 [ 3.75074] ((1 . 3) (6 . 9) (11 . 12) (13 . 13)) 10.056 {0/3:6} B:0 5.11068 [ 5.35574] ((4 . 10) (5 . 11) (6 . 12) (11 . 15)) 5.405 {2/4:6} B:0 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.2667] [2595, 6573]: Comparing 1isp_A and 3grs, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 41 (18 H + 23 S) secondary structure elements in 3grs, of which 11 satisfy the size requirements. 2.20038 [ 2.20038] ((1 . 17) (2 . 18) (4 . 19) (6 . 22) (9 . 25)) 5.713 {0/3:10} B:0 2.75002 [ 2.75002] ((1 . 17) (2 . 18) (4 . 19) (9 . 25)) 3.103 {0/1:6} B:0 2.75013 [ 2.75013] ((5 . 16) (6 . 17) (7 . 18) (9 . 19)) 5.164 {0/0:6} B:0 2.75050 [ 2.75050] ((2 . 18) (4 . 19) (6 . 22) (9 . 24)) 7.212 {0/4:6} B:0 2.81193 [ 2.81193] ((5 . 15) (7 . 16) (9 . 17) (11 . 19) (13 . 21)) 6.760 {1/4:10} B:0 SIMILARITY (1/min{score1}): 0.5454 [and 1/min{score2}: 0.5454] [2595, 6575]: Comparing 1isp_A and 3kvt, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 10 (6 H + 4 S) secondary structure elements in 3kvt, of which 6 satisfy the size requirements. 2.75062 [ 1.50383] ((9 . 1) (11 . 5) (14 . 6) (15 . 7)) 7.636 {0/2:6} B:0 2.75094 [ 1.50576] ((9 . 2) (11 . 5) (14 . 6) (15 . 7)) 8.460 {0/2:6} B:0 3.66657 [ 3.36756] ((11 . 1) (13 . 2) (14 . 3) (15 . 6)) 8.679 {1/3:6} B:0 6.71442 [ 6.67094] ((6 . 1) (9 . 2) (11 . 5) (14 . 7)) 5.140 {2/3:6} B:0 7.53372 [ 7.50306] ((6 . 1) (7 . 3) (11 . 5) (14 . 7)) 8.975 {3/4:6} B:0 SIMILARITY (1/min{score1}): 0.5448 [and 1/min{score2}: 0.9863] [2595, 6578]: Comparing 1isp_A and 3lad_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 41 (16 H + 25 S) secondary structure elements in 3lad_A, of which 10 satisfy the size requirements. 2.75028 [ 2.50037] ((9 . 31) (11 . 32) (13 . 34) (15 . 39)) 6.248 {0/0:6} B:0 2.75045 [ 2.50060] ((9 . 32) (11 . 34) (13 . 38) (15 . 39)) 7.050 {0/0:6} B:0 2.75082 [ 2.50109] ((6 . 31) (9 . 32) (11 . 37) (13 . 38)) 8.172 {0/0:6} B:0 2.75086 [ 2.50115] ((9 . 32) (11 . 37) (13 . 38) (15 . 39)) 8.278 {0/0:6} B:0 2.75149 [ 2.50198] ((6 . 31) (9 . 34) (13 . 38) (15 . 41)) 9.495 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.6347 [and 1/min{score2}: 0.6973] [2595, 6584]: Comparing 1isp_A and 3nul, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 10 (3 H + 7 S) secondary structure elements in 3nul, of which 10 satisfy the size requirements. 2.75050 [ 2.50067] ((1 . 3) (2 . 4) (6 . 9) (7 . 10)) 7.240 {0/4:6} B:0 2.75057 [ 2.50076] ((2 . 4) (4 . 5) (6 . 9) (7 . 10)) 7.473 {0/4:6} B:0 3.66633 [ 3.57069] ((1 . 2) (2 . 4) (6 . 7) (9 . 9)) 7.087 {1/3:6} B:0 6.71445 [ 6.69943] ((2 . 1) (4 . 2) (5 . 4) (9 . 8)) 7.632 {2/3:6} B:0 2.75085 [ 2.50114] ((2 . 4) (4 . 5) (7 . 10) (9 . 9)) 8.263 {0/4:6} B:1 SIMILARITY (1/min{score1}): 0.3636 [and 1/min{score2}: 0.3999] [2595, 6585]: Comparing 1isp_A and 3pmg_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 48 (22 H + 26 S) secondary structure elements in 3pmg_A, of which 15 satisfy the size requirements. 1.83414 [ 2.50032] ((1 . 6) (2 . 7) (4 . 8) (5 . 9) (6 . 10) (13 . 13)) 6.014 {0/6:15} B:0 2.20036 [ 3.00014] ((4 . 2) (5 . 4) (6 . 6) (7 . 7) (9 . 8)) 5.612 {0/6:10} B:0 2.20111 [ 3.00044] ((1 . 6) (2 . 7) (4 . 8) (5 . 9) (9 . 13)) 7.470 {0/4:10} B:0 2.36602 [ 3.07072] ((5 . 4) (6 . 6) (7 . 7) (9 . 8) (14 . 12)) 10.653 {1/6:10} B:0 2.75007 [ 3.75003] ((1 . 8) (2 . 9) (4 . 10) (11 . 15)) 4.471 {0/3:6} B:0 SIMILARITY (1/min{score1}): 0.5452 [and 1/min{score2}: 0.4552] [2595, 6586]: Comparing 1isp_A and 3pmg_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 48 (22 H + 26 S) secondary structure elements in 3pmg_A, of which 8 satisfy the size requirements. 2.75091 [ 2.00235] ((4 . 18) (5 . 19) (7 . 23) (9 . 24)) 8.387 {0/1:6} B:0 2.75099 [ 2.00258] ((2 . 16) (4 . 18) (5 . 19) (9 . 24)) 8.579 {0/3:6} B:0 3.66620 [ 3.43653] ((5 . 16) (7 . 19) (11 . 24) (13 . 25)) 5.490 {1/3:6} B:0 4.20701 [ 4.06131] ((2 . 16) (5 . 17) (7 . 19) (11 . 24)) 7.924 {2/5:6} B:0 6.71444 [ 6.68016] ((1 . 18) (2 . 19) (5 . 22) (6 . 24)) 7.414 {2/3:6} B:0 SIMILARITY (1/min{score1}): 0.4374 [and 1/min{score2}: 0.5000] [2595, 6587]: Comparing 1isp_A and 3pmg_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 48 (22 H + 26 S) secondary structure elements in 3pmg_A, of which 10 satisfy the size requirements. 2.75007 [ 2.50010] ((2 . 27) (4 . 29) (5 . 32) (6 . 33)) 4.456 {0/0:6} B:0 2.75016 [ 2.50022] ((5 . 27) (6 . 29) (7 . 30) (9 . 33)) 5.470 {0/0:6} B:0 2.75050 [ 2.50067] ((2 . 27) (4 . 29) (5 . 30) (6 . 31)) 7.233 {0/0:6} B:0 2.75078 [ 2.50104] ((9 . 29) (11 . 31) (13 . 33) (15 . 35)) 8.087 {0/0:6} B:0 2.75090 [ 2.50119] ((7 . 27) (11 . 29) (13 . 33) (15 . 35)) 8.364 {0/0:6} B:0 SIMILARITY (1/min{score1}): 0.5444 [and 1/min{score2}: 0.5983] [2595, 6598]: Comparing 1isp_A and 3sil, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 31 (4 H + 27 S) secondary structure elements in 3sil, of which 24 satisfy the size requirements. 2.20246 [ 4.80024] ((4 . 10) (5 . 12) (9 . 17) (11 . 20) (13 . 22)) 9.108 {0/6:10} B:0 2.50657 [ 4.83588] ((5 . 12) (6 . 13) (9 . 16) (11 . 17) (13 . 22)) 7.534 {1/5:10} B:0 2.75008 [ 6.00001] ((2 . 12) (4 . 13) (6 . 17) (11 . 22)) 4.500 {0/4:6} B:0 2.75012 [ 6.00001] ((4 . 21) (9 . 25) (11 . 27) (15 . 31)) 5.013 {0/2:6} B:0 2.75017 [ 6.00002] ((1 . 3) (6 . 7) (9 . 8) (11 . 10)) 5.500 {0/1:6} B:0 SIMILARITY (1/min{score1}): 0.4540 [and 1/min{score2}: 0.2377] [2595, 6605]: Comparing 1isp_A and 3ygs_P, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 7 (7 H + 0 S) secondary structure elements in 3ygs_P, of which 7 satisfy the size requirements. NO SIMILARITY! [2595, 6613]: Comparing 1isp_A and 4kbp_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 35 (12 H + 23 S) secondary structure elements in 4kbp_A, of which 18 satisfy the size requirements. 1.83343 [ 3.00002] ((4 . 22) (5 . 23) (6 . 24) (9 . 27) (11 . 31) (13 . 32)) 3.572 {0/7:15} B:0 2.20011 [ 3.60002] ((1 . 22) (4 . 24) (6 . 27) (11 . 31) (13 . 32)) 4.151 {0/4:10} B:0 2.20013 [ 3.60003] ((4 . 22) (5 . 23) (6 . 24) (9 . 27) (13 . 31)) 4.402 {0/5:10} B:0 2.20020 [ 3.60005] ((4 . 24) (5 . 25) (6 . 27) (9 . 31) (11 . 32)) 4.855 {0/5:10} B:0 2.20026 [ 3.60006] ((1 . 22) (4 . 24) (5 . 26) (9 . 31) (11 . 32)) 5.198 {0/6:10} B:0 SIMILARITY (1/min{score1}): 0.5454 [and 1/min{score2}: 0.3333] [2595, 6622]: Comparing 1isp_A and 5eau, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 28 (28 H + 0 S) secondary structure elements in 5eau, of which 9 satisfy the size requirements. NO SIMILARITY! [2595, 6635]: Comparing 1isp_A and 7fd1_A, based on their crossing files. There are 15 (9 H + 6 S) secondary structure elements in 1isp_A, of which 11 satisfy the size requirements. There are 11 (7 H + 4 S) secondary structure elements in 7fd1_A, of which 9 satisfy the size requirements. 3.13264 [ 2.83658] ((1 . 1) (2 . 3) (5 . 9) (7 . 10)) 7.544 {1/4:6} B:0 3.66676 [ 3.49502] ((4 . 1) (6 . 4) (7 . 6) (9 . 7)) 9.498 {1/3:6} B:0 5.11077 [ 5.05061] ((1 . 1) (2 . 2) (4 . 4) (7 . 9)) 8.034 {2/4:6} B:0 5.11078 [ 5.05062] ((2 . 2) (6 . 5) (7 . 6) (9 . 7)) 8.104 {1/2:6} B:0 3.13302 [ 2.83709] ((5 . 2) (6 . 4) (7 . 3) (9 . 5)) 8.922 {1/4:6} B:1 SIMILARITY (1/min{score1}): 0.3192 [and 1/min{score2}: 0.3525] -------------------------------------------------------------------------------------------------------------------------