------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 1599 1fp3_A) ( 246 1ayx ) 0.6808 0.6808 6.0229 ( 3 58 78) 0 0.7207 0.7207 19 19 ( 1599 1fp3_A) ( 514 1c3d ) 0.6311 0.9201 5.8740 ( 0 56 66) 0 0.6314 0.9219 19 13 ( 1599 1fp3_A) ( 553 1cb8_A) 0.5784 0.7314 6.9738 ( 0 42 55) 0 0.6302 0.7955 19 15 ( 1599 1fp3_A) ( 627 1clc ) 0.6816 0.7188 6.3117 ( 3 65 78) 0 0.6833 0.7210 19 18 ( 1599 1fp3_A) ( 792 1dce_B) 0.6312 0.8554 5.6126 ( 0 55 66) 0 0.6815 0.9164 19 14 ( 1599 1fp3_A) ( 868 1dl2_A) 0.5262 0.3226 4.8140 ( 1 39 45) 0 0.8052 0.5126 19 31 ( 1599 1fp3_A) ( 1581 1fo3_A) 0.5262 0.3571 4.8735 ( 0 36 45) 0 0.6502 0.5406 19 28 ( 1599 1fp3_A) ( 1599 1fp3_A) 1.0000 1.0000 0.0000 ( 0 152 171) 0 1.0000 1.0000 19 19 ( 1599 1fp3_A) ( 1780 1g9g_A) 0.7360 0.4785 5.2834 ( 8 84 105) 1 0.7788 0.5091 19 31 ( 1599 1fp3_A) ( 1788 1gai ) 0.6832 0.7209 5.6559 ( 2 61 78) 0 0.6836 0.7214 19 18 ( 1599 1fp3_A) ( 1998 1gxm_A) 0.4320 0.5106 6.1327 ( 5 29 36) 0 0.4736 0.6424 19 14 ( 1599 1fp3_A) ( 2035 1h12_A) 0.6830 0.6830 6.1871 ( 2 64 78) 0 0.7246 0.7246 19 19 ( 1599 1fp3_A) ( 2085 1h54_A) 0.3684 0.2414 5.1065 ( 0 17 21) 0 0.7338 0.4824 19 29 ( 1599 1fp3_A) ( 2242 1hn0_A) 0.4631 0.4485 8.3025 ( 6 35 45) 0 0.6306 0.5992 19 20 ( 1599 1fp3_A) ( 2346 1hzf_A) 0.6311 0.9198 5.9958 ( 0 54 66) 0 0.6313 0.9215 19 13 ( 1599 1fp3_A) ( 2438 1ia6_A) 0.6311 0.7490 5.8183 ( 0 56 66) 0 0.7062 0.8106 19 16 ( 1599 1fp3_A) ( 2688 1j0m_A) 0.6310 0.7487 6.1687 ( 0 53 66) 0 0.6801 0.8029 19 16 ( 1599 1fp3_A) ( 3407 1kre_A) 0.5789 0.3793 3.7807 ( 1 46 55) 0 0.7877 0.5221 19 29 ( 1599 1fp3_A) ( 3413 1ks8_A) 0.6311 0.6661 5.8901 ( 0 55 66) 0 0.6820 0.7193 19 18 ( 1599 1fp3_A) ( 3460 1kwf_A) 0.6313 0.9210 5.3695 ( 0 53 66) 0 0.6828 0.9906 19 13 ( 1599 1fp3_A) ( 3600 1ld8_B) 0.3158 0.3000 5.1394 ( 0 9 15) 0 0.6834 0.6494 19 20 ( 1599 1fp3_A) ( 3613 1lf6_A) 0.6311 0.6660 6.0632 ( 0 54 66) 0 0.7111 0.7447 19 18 ( 1599 1fp3_A) ( 4101 1n1b_A) 0.3705 0.4039 6.7490 ( 6 25 36) 0 0.4736 0.6914 19 13 ( 1599 1fp3_A) ( 4125 1n4q_B) 0.6312 0.7988 5.5812 ( 0 52 66) 0 0.6312 0.7989 19 15 ( 1599 1fp3_A) ( 4152 1n7o_A) 0.6310 0.7486 6.1968 ( 1 54 66) 0 0.6770 0.7959 19 16 ( 1599 1fp3_A) ( 4195 1nc5_A) 0.7169 0.7899 4.4362 ( 6 76 91) 0 0.7257 0.8045 19 17 ( 1599 1fp3_A) ( 4424 1nxc_A) 0.5788 0.3928 4.8168 ( 0 41 55) 0 0.7870 0.5526 19 28 ( 1599 1fp3_A) ( 5273 1qaz_A) 0.6301 0.8503 7.1066 ( 2 52 66) 0 0.6306 0.8528 19 14 ( 1599 1fp3_A) ( 5710 1rwh_A) 0.6311 0.7985 5.8689 ( 0 54 66) 0 0.6803 0.8543 19 15 ( 1599 1fp3_A) ( 6106 1ut9_A) 0.6673 0.7362 6.5659 ( 5 61 78) 0 0.6679 0.7371 19 17 ( 1599 1fp3_A) ( 6536 2sqc_A) 0.6783 0.7989 4.7964 ( 4 64 78) 0 0.6836 0.8111 19 16 ( 1599 1fp3_A) ( 6537 2sqc_A) 0.4735 0.6911 6.6897 ( 0 27 36) 0 0.5735 0.8127 19 13 ( 1599 1fp3_A) ( 6622 5eau ) 0.4216 0.5289 5.6818 ( 5 27 36) 0 0.4734 0.9887 19 9 -------------------------------------------------------------------------------------------------------------------------