------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 2035 1h12_A) ( 246 1ayx ) 0.6830 0.6830 6.0987 ( 2 63 78) 0 0.6830 0.6830 19 19 ( 2035 1h12_A) ( 514 1c3d ) 0.6310 0.9195 6.1388 ( 0 55 66) 0 0.6313 0.9215 19 13 ( 2035 1h12_A) ( 553 1cb8_A) 0.5785 0.7319 6.4468 ( 0 43 55) 0 0.6312 0.7987 19 15 ( 2035 1h12_A) ( 627 1clc ) 0.7362 0.7770 5.1364 ( 1 75 91) 0 0.7362 0.7770 19 18 ( 2035 1h12_A) ( 792 1dce_B) 0.6312 0.8552 5.7647 ( 0 56 66) 0 0.6312 0.8555 19 14 ( 2035 1h12_A) ( 868 1dl2_A) 0.3684 0.2258 6.0475 ( 0 17 21) 0 0.8857 0.5745 19 31 ( 2035 1h12_A) ( 1581 1fo3_A) 0.6311 0.4285 5.7099 ( 1 55 66) 0 0.8264 0.5691 19 28 ( 2035 1h12_A) ( 1599 1fp3_A) 0.6830 0.6830 6.1871 ( 2 64 78) 0 0.7246 0.7246 19 19 ( 2035 1h12_A) ( 1780 1g9g_A) 0.7882 0.4838 3.6246 ( 3 87 105) 0 0.7882 0.4838 19 31 ( 2035 1h12_A) ( 1788 1gai ) 0.6313 0.6663 5.2189 ( 0 54 66) 0 0.6822 0.7196 19 18 ( 2035 1h12_A) ( 1998 1gxm_A) 0.4210 0.5712 5.5188 ( 0 23 28) 0 0.5252 0.7091 19 14 ( 2035 1h12_A) ( 2035 1h12_A) 1.0000 1.0000 0.0000 ( 0 155 171) 0 1.0000 1.0000 19 19 ( 2035 1h12_A) ( 2085 1h54_A) 0.5857 0.4321 6.3154 ( 9 64 78) 0 0.6820 0.4501 19 29 ( 2035 1h12_A) ( 2242 1hn0_A) 0.3684 0.3500 6.6211 ( 0 17 21) 0 0.6576 0.6290 19 20 ( 2035 1h12_A) ( 2346 1hzf_A) 0.6310 0.9193 6.2239 ( 0 54 66) 0 0.6313 0.9212 19 13 ( 2035 1h12_A) ( 2438 1ia6_A) 0.7316 0.8627 5.4833 ( 4 74 91) 0 0.7316 0.8627 19 16 ( 2035 1h12_A) ( 2688 1j0m_A) 0.4850 0.5203 6.2842 ( 8 46 55) 0 0.6833 0.8105 19 16 ( 2035 1h12_A) ( 3407 1kre_A) 0.4103 0.2745 3.4882 ( 3 22 28) 0 0.7774 0.5157 19 29 ( 2035 1h12_A) ( 3413 1ks8_A) 0.7346 0.7749 5.4998 ( 3 74 91) 0 0.7346 0.7749 19 18 ( 2035 1h12_A) ( 3460 1kwf_A) 0.6316 0.9229 2.8018 ( 0 55 66) 0 0.6316 0.9229 19 13 ( 2035 1h12_A) ( 3600 1ld8_B) 0.2632 0.2500 5.7396 ( 0 9 10) 0 0.6820 0.6483 19 20 ( 2035 1h12_A) ( 3613 1lf6_A) 0.6313 0.6663 5.2149 ( 0 56 66) 0 0.7820 0.8236 19 18 ( 2035 1h12_A) ( 4101 1n1b_A) 0.2631 0.3846 6.5762 ( 0 8 10) 0 0.4735 0.6913 19 13 ( 2035 1h12_A) ( 4125 1n4q_B) 0.6334 0.7353 6.3026 ( 7 62 78) 0 0.6814 0.8577 19 15 ( 2035 1h12_A) ( 4152 1n7o_A) 0.3684 0.4374 6.6173 ( 0 16 21) 0 0.6363 0.7490 19 16 ( 2035 1h12_A) ( 4195 1nc5_A) 0.6312 0.7052 5.5779 ( 0 54 66) 0 0.7360 0.8220 19 17 ( 2035 1h12_A) ( 4424 1nxc_A) 0.4765 0.4204 5.3844 ( 14 70 91) 0 0.7329 0.5125 19 28 ( 2035 1h12_A) ( 5273 1qaz_A) 0.5784 0.7834 6.6999 ( 0 45 55) 0 0.6290 0.8454 19 14 ( 2035 1h12_A) ( 5710 1rwh_A) 0.3153 0.3985 9.3009 ( 1 12 15) 0 0.6836 0.8648 19 15 ( 2035 1h12_A) ( 6106 1ut9_A) 0.7867 0.8776 5.8083 ( 3 81 105) 0 0.7867 0.8776 19 17 ( 2035 1h12_A) ( 6536 2sqc_A) 0.6178 0.6829 4.8786 ( 8 65 78) 0 0.6432 0.7494 19 16 ( 2035 1h12_A) ( 6537 2sqc_A) 0.2632 0.3846 5.9710 ( 0 7 10) 0 0.5739 0.8146 19 13 ( 2035 1h12_A) ( 6622 5eau ) 0.4216 0.5288 6.6216 ( 5 27 36) 0 0.4735 0.9918 19 9 -------------------------------------------------------------------------------------------------------------------------