------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 2346 1hzf_A) ( 246 1ayx ) 0.9187 0.6309 6.4598 ( 0 54 66) 0 0.9208 0.6312 13 19 ( 2346 1hzf_A) ( 514 1c3d ) 0.9999 0.9999 2.0100 ( 0 68 78) 0 0.9999 0.9999 13 13 ( 2346 1hzf_A) ( 553 1cb8_A) 0.8437 0.7321 6.2371 ( 0 42 55) 0 0.8446 0.7326 13 15 ( 2346 1hzf_A) ( 627 1clc ) 0.9209 0.6662 5.4122 ( 0 56 66) 0 0.9221 0.6665 13 18 ( 2346 1hzf_A) ( 792 1dce_B) 0.9217 0.8562 4.8502 ( 0 58 66) 0 0.9219 0.8563 13 14 ( 2346 1hzf_A) ( 868 1dl2_A) 0.9199 0.3871 5.9456 ( 0 54 66) 0 0.9782 0.4191 13 31 ( 2346 1hzf_A) ( 1581 1fo3_A) 0.9201 0.4285 5.8564 ( 0 57 66) 0 0.9213 0.4285 13 28 ( 2346 1hzf_A) ( 1599 1fp3_A) 0.9198 0.6311 5.9958 ( 0 54 66) 0 0.9215 0.6313 13 19 ( 2346 1hzf_A) ( 1780 1g9g_A) 0.9212 0.3871 5.2191 ( 0 52 66) 0 0.9221 0.3871 13 31 ( 2346 1hzf_A) ( 1788 1gai ) 0.9197 0.6660 6.0414 ( 0 53 66) 0 0.9216 0.6664 13 18 ( 2346 1hzf_A) ( 1998 1gxm_A) 0.6151 0.5712 5.2923 ( 0 23 28) 0 0.6151 0.5712 13 14 ( 2346 1hzf_A) ( 2035 1h12_A) 0.9193 0.6310 6.2239 ( 0 54 66) 0 0.9212 0.6313 13 19 ( 2346 1hzf_A) ( 2085 1h54_A) 0.9183 0.4137 6.6038 ( 0 53 66) 0 0.9207 0.4138 13 29 ( 2346 1hzf_A) ( 2242 1hn0_A) 0.7679 0.4998 5.9974 ( 0 35 45) 0 0.9624 0.6453 13 20 ( 2346 1hzf_A) ( 2346 1hzf_A) 1.0000 1.0000 0.0000 ( 0 71 78) 0 1.0000 1.0000 13 13 ( 2346 1hzf_A) ( 2438 1ia6_A) 0.9215 0.7494 5.0242 ( 0 57 66) 0 0.9225 0.7498 13 16 ( 2346 1hzf_A) ( 2688 1j0m_A) 0.9186 0.7484 6.4884 ( 0 53 66) 0 0.9199 0.7489 13 16 ( 2346 1hzf_A) ( 3407 1kre_A) 0.6612 0.4029 5.3104 ( 7 50 66) 0 0.9882 0.4481 13 29 ( 2346 1hzf_A) ( 3413 1ks8_A) 0.9216 0.6664 4.9246 ( 0 55 66) 0 0.9962 0.7215 13 18 ( 2346 1hzf_A) ( 3460 1kwf_A) 0.9204 0.9204 5.7120 ( 0 52 66) 0 0.9218 0.9218 13 13 ( 2346 1hzf_A) ( 3600 1ld8_B) 0.9217 0.5998 4.8067 ( 0 57 66) 0 0.9655 0.6457 13 20 ( 2346 1hzf_A) ( 3613 1lf6_A) 0.9216 0.6664 4.8664 ( 0 54 66) 0 0.9216 0.6664 13 18 ( 2346 1hzf_A) ( 4101 1n1b_A) 0.4990 0.4990 5.6849 ( 5 27 36) 0 0.6130 0.6130 13 13 ( 2346 1hzf_A) ( 4125 1n4q_B) 0.9218 0.7994 4.7268 ( 0 56 66) 0 0.9220 0.7995 13 15 ( 2346 1hzf_A) ( 4152 1n7o_A) 0.9180 0.7482 6.6289 ( 1 54 66) 0 0.9195 0.7487 13 16 ( 2346 1hzf_A) ( 4195 1nc5_A) 0.9223 0.7057 4.1847 ( 0 56 66) 0 0.9226 0.7058 13 17 ( 2346 1hzf_A) ( 4424 1nxc_A) 0.9202 0.4285 5.8029 ( 0 51 66) 0 0.9938 0.4642 13 28 ( 2346 1hzf_A) ( 5273 1qaz_A) 0.8428 0.7834 6.7069 ( 0 45 55) 0 0.8442 0.7844 13 14 ( 2346 1hzf_A) ( 5710 1rwh_A) 0.9187 0.7979 6.4389 ( 0 55 66) 0 0.9203 0.7986 13 15 ( 2346 1hzf_A) ( 6106 1ut9_A) 0.9201 0.7051 5.8658 ( 0 52 66) 0 0.9217 0.7055 13 17 ( 2346 1hzf_A) ( 6536 2sqc_A) 0.9220 0.7496 4.4875 ( 0 58 66) 0 0.9228 0.7499 13 16 ( 2346 1hzf_A) ( 6537 2sqc_A) 0.6151 0.6151 5.3876 ( 0 20 28) 0 0.8122 0.8122 13 13 ( 2346 1hzf_A) ( 6622 5eau ) 0.6151 0.8874 5.1704 ( 0 22 28) 0 0.6151 0.8874 13 9 -------------------------------------------------------------------------------------------------------------------------