------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 3413 1ks8_A) ( 246 1ayx ) 0.6659 0.6310 6.2697 ( 0 51 66) 0 0.6659 0.6310 18 19 ( 3413 1ks8_A) ( 514 1c3d ) 0.6664 0.9218 4.7521 ( 0 55 66) 0 0.7216 0.9970 18 13 ( 3413 1ks8_A) ( 553 1cb8_A) 0.6106 0.7320 6.3782 ( 0 41 55) 0 0.6646 0.7949 18 15 ( 3413 1ks8_A) ( 627 1clc ) 0.8292 0.8292 2.1876 ( 4 89 105) 0 0.8292 0.8292 18 18 ( 3413 1ks8_A) ( 792 1dce_B) 0.6664 0.8561 4.9711 ( 0 54 66) 0 0.7211 0.9247 18 14 ( 3413 1ks8_A) ( 868 1dl2_A) 0.5441 0.3975 6.1595 ( 10 60 78) 0 0.7764 0.4515 18 31 ( 3413 1ks8_A) ( 1581 1fo3_A) 0.5735 0.4147 5.9952 ( 7 49 66) 0 0.7129 0.4912 18 28 ( 3413 1ks8_A) ( 1599 1fp3_A) 0.6661 0.6311 5.8901 ( 0 55 66) 0 0.7193 0.6820 18 19 ( 3413 1ks8_A) ( 1780 1g9g_A) 0.6843 0.4165 4.9332 ( 6 62 78) 0 0.8219 0.4831 18 31 ( 3413 1ks8_A) ( 1788 1gai ) 0.6661 0.6661 5.8932 ( 0 52 66) 0 0.7181 0.7181 18 18 ( 3413 1ks8_A) ( 1998 1gxm_A) 0.4478 0.5105 6.6410 ( 5 29 36) 0 0.4999 0.6424 18 14 ( 3413 1ks8_A) ( 2035 1h12_A) 0.7749 0.7346 5.4998 ( 3 74 91) 0 0.7749 0.7346 18 19 ( 3413 1ks8_A) ( 2085 1h54_A) 0.6662 0.4137 5.5679 ( 0 52 66) 0 0.6662 0.4219 18 29 ( 3413 1ks8_A) ( 2242 1hn0_A) 0.6099 0.5493 7.7141 ( 1 45 55) 0 0.7190 0.6481 18 20 ( 3413 1ks8_A) ( 2346 1hzf_A) 0.6664 0.9216 4.9246 ( 0 55 66) 0 0.7215 0.9962 18 13 ( 3413 1ks8_A) ( 2438 1ia6_A) 0.8859 0.9946 1.5015 ( 4 104 120) 0 0.8859 0.9946 18 16 ( 3413 1ks8_A) ( 2688 1j0m_A) 0.6660 0.7488 6.0865 ( 0 54 66) 0 0.6664 0.7495 18 16 ( 3413 1ks8_A) ( 3407 1kre_A) 0.5501 0.4204 6.0460 ( 10 61 78) 0 0.7622 0.4813 18 29 ( 3413 1ks8_A) ( 3413 1ks8_A) 1.0000 1.0000 0.0000 ( 0 138 153) 0 1.0000 1.0000 18 18 ( 3413 1ks8_A) ( 3460 1kwf_A) 0.6663 0.9213 5.1483 ( 0 53 66) 0 0.6665 0.9223 18 13 ( 3413 1ks8_A) ( 3600 1ld8_B) 0.4692 0.4500 5.9706 ( 9 47 55) 0 0.7216 0.6497 18 20 ( 3413 1ks8_A) ( 3613 1lf6_A) 0.6664 0.6664 4.9725 ( 0 53 66) 0 0.8307 0.8307 18 18 ( 3413 1ks8_A) ( 4101 1n1b_A) 0.4407 0.4798 5.6585 ( 7 35 45) 0 0.4999 0.6919 18 13 ( 3413 1ks8_A) ( 4125 1n4q_B) 0.3888 0.4665 6.5514 ( 0 17 21) 0 0.7217 0.8654 18 15 ( 3413 1ks8_A) ( 4152 1n7o_A) 0.6657 0.7483 6.5015 ( 1 55 66) 0 0.7217 0.8115 18 16 ( 3413 1ks8_A) ( 4195 1nc5_A) 0.6665 0.7057 4.0912 ( 0 55 66) 0 0.7717 0.8155 18 17 ( 3413 1ks8_A) ( 4424 1nxc_A) 0.5165 0.4011 5.7443 ( 9 52 66) 0 0.7747 0.4997 18 28 ( 3413 1ks8_A) ( 5273 1qaz_A) 0.6104 0.7833 6.7703 ( 0 43 55) 0 0.6657 0.8538 18 14 ( 3413 1ks8_A) ( 5710 1rwh_A) 0.6659 0.7982 6.1743 ( 0 55 66) 0 0.7216 0.8651 18 15 ( 3413 1ks8_A) ( 6106 1ut9_A) 0.7776 0.8233 3.5700 ( 1 73 91) 0 0.7776 0.8233 18 17 ( 3413 1ks8_A) ( 6536 2sqc_A) 0.6666 0.7498 3.6600 ( 0 55 66) 0 0.7151 0.7998 18 16 ( 3413 1ks8_A) ( 6537 2sqc_A) 0.4998 0.6913 6.3160 ( 0 27 36) 0 0.6613 0.8973 18 13 ( 3413 1ks8_A) ( 6622 5eau ) 0.4444 0.8875 5.0738 ( 0 21 28) 0 0.4681 0.8875 18 9 -------------------------------------------------------------------------------------------------------------------------