------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 16 1a17 ) ( 16 1a17 ) 1.0000 1.0000 0.0000 ( 0 12 21) 0 1.0000 1.0000 7 7 ( 16 1a17 ) ( 287 1b3u_A) 0.9849 0.1628 8.0039 ( 0 6 21) 0 0.9849 0.1628 7 43 ( 16 1a17 ) ( 314 1b89_A) 0.9919 0.3182 6.8161 ( 0 6 21) 0 0.9919 0.3182 7 22 ( 16 1a17 ) ( 444 1bpo_A) 0.7140 0.5000 4.4145 ( 0 4 10) 0 0.7140 0.5039 7 10 ( 16 1a17 ) ( 789 1dce_A) 0.8537 0.3999 6.6425 ( 0 6 15) 0 0.9874 0.4664 7 15 ( 16 1a17 ) ( 954 1dvp_A) 0.7139 0.6248 4.7138 ( 0 2 10) 0 0.8366 0.7392 7 8 ( 16 1a17 ) ( 1069 1e7u_A) 0.9807 0.5820 8.5380 ( 0 8 21) 0 0.9807 0.5820 7 12 ( 16 1a17 ) ( 1118 1ee4_A) 0.9955 0.2500 5.8753 ( 0 12 21) 0 0.9955 0.2500 7 28 ( 16 1a17 ) ( 1205 1elk_A) 0.7140 0.5555 4.6559 ( 0 2 10) 0 0.7140 0.5555 7 9 ( 16 1a17 ) ( 1206 1elr_A) 0.9956 0.9956 5.8588 ( 0 7 21) 0 0.9956 0.9956 7 7 ( 16 1a17 ) ( 1210 1elw_A) 0.9913 0.9913 6.9420 ( 0 10 21) 0 0.9913 0.9913 7 7 ( 16 1a17 ) ( 1315 1eyh_A) 0.5706 0.4996 7.6395 ( 0 0 6) 0 0.5706 0.4996 7 8 ( 16 1a17 ) ( 1470 1fch_A) 0.9920 0.4117 6.7933 ( 0 12 21) 0 0.9920 0.4117 7 17 ( 16 1a17 ) ( 1983 1gw5_A) 0.9907 0.2187 7.0625 ( 0 8 21) 0 0.9918 0.2187 7 32 ( 16 1a17 ) ( 1984 1gw5_B) 0.9877 0.2187 7.5973 ( 0 11 21) 0 0.9877 0.2187 7 32 ( 16 1a17 ) ( 2101 1h6k_A) 0.9667 0.5368 9.8740 ( 0 5 21) 0 0.9667 0.5368 7 13 ( 16 1a17 ) ( 2102 1h6k_A) 0.7125 0.4997 7.0507 ( 0 4 10) 0 0.7125 0.4997 7 10 ( 16 1a17 ) ( 2103 1h6k_A) 0.8748 0.4628 6.3407 ( 1 11 21) 0 0.8748 0.4628 7 15 ( 16 1a17 ) ( 2197 1hf8_A) 0.0999 0.0999 6.5542 ( 2 2 6) 0 0.0999 0.0999 7 6 ( 16 1a17 ) ( 2213 1hh8_A) 0.9958 0.5830 5.7912 ( 0 11 21) 0 0.9958 0.5830 7 12 ( 16 1a17 ) ( 2252 1ho8_A) 0.9928 0.2593 6.6316 ( 0 10 21) 0 0.9928 0.2593 7 27 ( 16 1a17 ) ( 2276 1hs6_A) 0.8560 0.5998 5.0210 ( 0 7 15) 0 0.8560 0.6595 7 10 ( 16 1a17 ) ( 2292 1hu3_A) 0.8555 0.5997 5.5664 ( 0 5 15) 0 0.8555 0.5997 7 10 ( 16 1a17 ) ( 2342 1hz4_A) 0.9946 0.3888 6.1585 ( 0 10 21) 0 0.9946 0.3888 7 18 ( 16 1a17 ) ( 2493 1ihg_A) 0.9977 0.9977 4.9538 ( 0 12 21) 0 0.9977 0.9977 7 7 ( 16 1a17 ) ( 2698 1j1j_A) 0.5706 0.4442 7.8081 ( 0 3 6) 0 0.5706 0.4442 7 9 ( 16 1a17 ) ( 2829 1jdh_A) 0.9938 0.2059 6.3694 ( 0 12 21) 0 0.9940 0.2059 7 34 ( 16 1a17 ) ( 3216 1k8k_G) 0.5710 0.5710 6.5023 ( 0 2 6) 0 0.5710 0.5710 7 7 ( 16 1a17 ) ( 3353 1klx_A) 0.9683 0.8582 9.7443 ( 0 11 21) 0 0.9683 0.8582 7 8 ( 16 1a17 ) ( 3392 1kps_B) 0.7133 0.5553 6.1283 ( 0 4 10) 0 0.7133 0.5553 7 9 ( 16 1a17 ) ( 3424 1kt1_A) 0.9987 0.9987 4.2638 ( 0 12 21) 0 0.9987 0.9987 7 7 ( 16 1a17 ) ( 3434 1ku1_A) 0.5674 0.3993 11.4905 ( 0 5 6) 0 0.5707 0.4198 7 10 ( 16 1a17 ) ( 3540 1l5j_A) 0.8480 0.5984 8.5433 ( 0 3 15) 0 0.8480 0.5984 7 10 ( 16 1a17 ) ( 3599 1ld8_A) 0.8500 0.3749 8.0113 ( 0 5 15) 0 0.8500 0.4279 7 16 ( 16 1a17 ) ( 3602 1ldj_A) 0.8454 0.3157 9.1155 ( 0 7 15) 0 0.8454 0.3157 7 19 ( 16 1a17 ) ( 3711 1lrv ) 0.8499 0.3333 8.0410 ( 0 1 15) 0 0.8499 0.3333 7 18 ( 16 1a17 ) ( 3718 1lsh_A) 0.9761 0.3887 9.0294 ( 0 4 21) 0 0.9761 0.3887 7 18 ( 16 1a17 ) ( 3882 1m8z_A) 0.9847 0.2500 8.0305 ( 0 8 21) 0 0.9847 0.2500 7 28 ( 16 1a17 ) ( 4123 1n4k_A) 0.8499 0.7463 8.0415 ( 0 3 15) 0 0.8499 0.7463 7 8 ( 16 1a17 ) ( 4166 1n8v_A) nil ( 16 1a17 ) ( 4456 1nzn_A) 0.8528 0.9908 7.0521 ( 0 8 15) 0 0.8528 0.9908 7 6 ( 16 1a17 ) ( 4792 1ouv_A) 0.9922 0.4665 6.7669 ( 0 12 21) 0 0.9922 0.4665 7 15 ( 16 1a17 ) ( 4817 1oxj_A) 0.7141 0.7141 4.2604 ( 0 4 10) 0 0.7141 0.7141 7 7 ( 16 1a17 ) ( 4841 1oyz_A) 0.9918 0.4117 6.8468 ( 0 11 21) 0 0.9918 0.4117 7 17 ( 16 1a17 ) ( 4952 1paq_A) nil ( 16 1a17 ) ( 5190 1q2z_A) 0.7128 0.8302 6.7611 ( 0 3 10) 0 0.7128 0.8302 7 6 ( 16 1a17 ) ( 5284 1qbk_B) 0.9940 0.1489 6.3175 ( 0 11 21) 0 0.9940 0.1489 7 47 ( 16 1a17 ) ( 5285 1qc7_A) 0.5686 0.6606 10.5326 ( 0 4 6) 0 0.5709 0.6655 7 6 ( 16 1a17 ) ( 5326 1qgr_A) 0.9952 0.1429 5.9604 ( 0 10 21) 0 0.9956 0.1429 7 49 ( 16 1a17 ) ( 5354 1qjb_A) 0.9421 0.7597 11.5295 ( 0 8 21) 0 0.9421 0.7597 7 9 ( 16 1a17 ) ( 5417 1qqe_A) 0.9983 0.4666 4.6162 ( 0 11 21) 0 0.9983 0.4666 7 15 ( 16 1a17 ) ( 5441 1qsa_A) 0.9914 0.2592 6.9366 ( 0 5 21) 0 0.9914 0.2592 7 27 ( 16 1a17 ) ( 5595 1r8s_E) 0.5712 0.4000 5.4740 ( 0 2 6) 0 0.5712 0.4000 7 10 ( 16 1a17 ) ( 6033 1ujk_A) 0.7139 0.6248 4.8684 ( 0 2 10) 0 0.7139 0.6248 7 8 ( 16 1a17 ) ( 6077 1upk_A) 0.9882 0.3499 7.5082 ( 0 10 21) 0 0.9882 0.3499 7 20 ( 16 1a17 ) ( 6128 1uw4_B) 0.8559 0.5453 5.1589 ( 0 5 15) 0 0.8559 0.5453 7 11 ( 16 1a17 ) ( 6176 1v54_E) 0.7138 0.8324 5.0125 ( 0 0 10) 0 0.7138 0.8324 7 6 ( 16 1a17 ) ( 6212 1vdu_A) 0.8525 0.5992 7.1772 ( 0 3 15) 0 0.9840 0.6972 7 10 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