------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 3353 1klx_A) ( 16 1a17 ) 0.8582 0.9683 9.7443 ( 0 11 21) 0 0.8582 0.9683 8 7 ( 3353 1klx_A) ( 287 1b3u_A) 0.7780 0.1628 6.2388 ( 1 10 21) 0 0.7780 0.1811 8 43 ( 3353 1klx_A) ( 314 1b89_A) 0.7495 0.2727 4.8722 ( 0 3 15) 0 0.7495 0.2727 8 22 ( 3353 1klx_A) ( 444 1bpo_A) 0.6999 0.5819 4.7687 ( 1 10 15) 0 0.6999 0.5819 8 10 ( 3353 1klx_A) ( 789 1dce_A) 0.7493 0.4000 5.3481 ( 0 4 15) 0 0.7493 0.4000 8 15 ( 3353 1klx_A) ( 954 1dvp_A) 0.6242 0.6242 6.8076 ( 0 5 10) 0 0.6242 0.6242 8 8 ( 3353 1klx_A) ( 1069 1e7u_A) 0.7480 0.4997 6.9080 ( 0 5 15) 0 0.7480 0.4997 8 12 ( 3353 1klx_A) ( 1118 1ee4_A) 0.7491 0.2143 5.6223 ( 0 10 15) 0 0.7491 0.2486 8 28 ( 3353 1klx_A) ( 1205 1elk_A) 0.6497 0.6040 5.2101 ( 1 8 15) 0 0.6497 0.6040 8 9 ( 3353 1klx_A) ( 1206 1elr_A) 0.7495 0.8562 4.8342 ( 0 6 15) 0 0.7495 0.8562 8 7 ( 3353 1klx_A) ( 1210 1elw_A) 0.7499 0.8570 3.1236 ( 0 7 15) 0 0.7499 0.8570 8 7 ( 3353 1klx_A) ( 1315 1eyh_A) 0.4999 0.4999 5.4441 ( 0 3 6) 0 0.4999 0.4999 8 8 ( 3353 1klx_A) ( 1470 1fch_A) 0.8731 0.4117 5.6221 ( 0 9 21) 0 0.9926 0.4704 8 17 ( 3353 1klx_A) ( 1983 1gw5_A) 0.9923 0.2500 6.7273 ( 0 15 28) 0 0.9923 0.2500 8 32 ( 3353 1klx_A) ( 1984 1gw5_B) 0.9978 0.2500 4.9306 ( 0 18 28) 0 0.9978 0.2500 8 32 ( 3353 1klx_A) ( 2101 1h6k_A) 0.7481 0.4614 6.7356 ( 0 1 15) 0 0.7481 0.4614 8 13 ( 3353 1klx_A) ( 2102 1h6k_A) 0.5143 0.4530 6.5049 ( 1 6 10) 0 0.5143 0.4530 8 10 ( 3353 1klx_A) ( 2103 1h6k_A) 0.4993 0.2666 8.8421 ( 0 4 6) 0 0.4993 0.2666 8 15 ( 3353 1klx_A) ( 2197 1hf8_A) 0.4987 0.6611 10.3164 ( 0 1 6) 0 0.4987 0.6611 8 6 ( 3353 1klx_A) ( 2213 1hh8_A) 0.9972 0.6663 5.2169 ( 0 15 28) 0 0.9972 0.6663 8 12 ( 3353 1klx_A) ( 2252 1ho8_A) 0.8698 0.2592 7.2102 ( 0 14 21) 0 0.8700 0.2739 8 27 ( 3353 1klx_A) ( 2276 1hs6_A) 0.6246 0.4999 5.7272 ( 0 3 10) 0 0.6246 0.4999 8 10 ( 3353 1klx_A) ( 2292 1hu3_A) 0.7488 0.5996 6.0822 ( 0 6 15) 0 0.7488 0.5996 8 10 ( 3353 1klx_A) ( 2342 1hz4_A) 0.9958 0.4444 5.7858 ( 0 17 28) 0 0.9958 0.4444 8 18 ( 3353 1klx_A) ( 2493 1ihg_A) 0.7476 0.8525 7.2053 ( 0 9 15) 0 0.7476 0.8525 8 7 ( 3353 1klx_A) ( 2698 1j1j_A) 0.4999 0.4444 5.8229 ( 0 4 6) 0 0.4999 0.4444 8 9 ( 3353 1klx_A) ( 2829 1jdh_A) 0.7489 0.1765 5.8740 ( 0 12 15) 0 0.8673 0.2201 8 34 ( 3353 1klx_A) ( 3216 1k8k_G) 0.2484 0.2491 7.3896 ( 2 5 10) 0 0.4999 0.5712 8 7 ( 3353 1klx_A) ( 3353 1klx_A) 1.0000 1.0000 0.0000 ( 0 23 28) 0 1.0000 1.0000 8 8 ( 3353 1klx_A) ( 3392 1kps_B) 0.6245 0.5553 6.1420 ( 0 5 10) 0 0.6770 0.6225 8 9 ( 3353 1klx_A) ( 3424 1kt1_A) 0.7413 0.8406 9.9668 ( 0 7 15) 0 0.7413 0.8406 8 7 ( 3353 1klx_A) ( 3434 1ku1_A) 0.6243 0.4998 6.5772 ( 0 6 10) 0 0.6243 0.4998 8 10 ( 3353 1klx_A) ( 3540 1l5j_A) 0.6248 0.4999 4.7710 ( 0 4 10) 0 0.6248 0.5385 8 10 ( 3353 1klx_A) ( 3599 1ld8_A) 0.7499 0.3750 3.4699 ( 0 6 15) 0 0.7499 0.3750 8 16 ( 3353 1klx_A) ( 3602 1ldj_A) 0.4997 0.2105 7.1536 ( 0 3 6) 0 0.4997 0.2908 8 19 ( 3353 1klx_A) ( 3711 1lrv ) 0.7494 0.3333 5.0711 ( 0 5 15) 0 0.7494 0.3333 8 18 ( 3353 1klx_A) ( 3718 1lsh_A) 0.7488 0.3333 5.9947 ( 0 1 15) 0 0.7488 0.3333 8 18 ( 3353 1klx_A) ( 3882 1m8z_A) 0.8719 0.2500 6.3147 ( 0 8 21) 0 0.8734 0.2500 8 28 ( 3353 1klx_A) ( 4123 1n4k_A) 0.4999 0.4999 5.6926 ( 0 3 6) 0 0.4999 0.4999 8 8 ( 3353 1klx_A) ( 4166 1n8v_A) 0.3670 0.3879 7.2307 ( 1 4 6) 0 0.4997 0.6656 8 6 ( 3353 1klx_A) ( 4456 1nzn_A) 0.7477 0.9903 7.1434 ( 0 9 15) 0 0.7477 0.9903 8 6 ( 3353 1klx_A) ( 4792 1ouv_A) 0.9988 0.5333 4.2230 ( 0 22 28) 0 0.9988 0.5333 8 15 ( 3353 1klx_A) ( 4817 1oxj_A) 0.4999 0.5713 4.5400 ( 0 3 6) 0 0.7461 0.8495 8 7 ( 3353 1klx_A) ( 4841 1oyz_A) 0.8723 0.4117 6.0883 ( 0 13 21) 0 0.8723 0.4491 8 17 ( 3353 1klx_A) ( 4952 1paq_A) 0.4995 0.3998 8.2394 ( 0 4 6) 0 0.4995 0.3998 8 10 ( 3353 1klx_A) ( 5190 1q2z_A) 0.4999 0.6663 5.2216 ( 0 0 6) 0 0.4999 0.6663 8 6 ( 3353 1klx_A) ( 5284 1qbk_B) 0.8723 0.1489 6.0970 ( 0 11 21) 0 0.8723 0.1661 8 47 ( 3353 1klx_A) ( 5285 1qc7_A) 0.4999 0.6664 4.8931 ( 0 3 6) 0 0.4999 0.6664 8 6 ( 3353 1klx_A) ( 5326 1qgr_A) 0.8708 0.1429 6.8091 ( 0 10 21) 0 0.9916 0.1633 8 49 ( 3353 1klx_A) ( 5354 1qjb_A) 0.8655 0.7725 8.4006 ( 0 9 21) 0 0.8655 0.7725 8 9 ( 3353 1klx_A) ( 5417 1qqe_A) 0.7494 0.4000 5.1376 ( 0 7 15) 0 0.7494 0.4000 8 15 ( 3353 1klx_A) ( 5441 1qsa_A) 0.7497 0.2222 4.2082 ( 0 12 15) 0 0.7497 0.2580 8 27 ( 3353 1klx_A) ( 5595 1r8s_E) 0.4999 0.4000 5.1551 ( 0 4 6) 0 0.6241 0.4997 8 10 ( 3353 1klx_A) ( 6033 1ujk_A) 0.5000 0.5000 3.5205 ( 0 3 6) 0 0.6247 0.6247 8 8 ( 3353 1klx_A) ( 6077 1upk_A) 0.7489 0.3000 5.9346 ( 0 7 15) 0 0.7489 0.3316 8 20 ( 3353 1klx_A) ( 6128 1uw4_B) 0.7492 0.5453 5.3883 ( 0 3 15) 0 0.7492 0.5453 8 11 ( 3353 1klx_A) ( 6176 1v54_E) 0.5000 0.6666 3.6907 ( 0 0 6) 0 0.5000 0.6666 8 6 ( 3353 1klx_A) ( 6212 1vdu_A) 0.6249 0.5000 3.8470 ( 0 6 10) 0 0.8708 0.6986 8 10 -------------------------------------------------------------------------------------------------------------------------