------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 954 1dvp_A) ( 16 1a17 ) 0.6248 0.7139 4.7138 ( 0 2 10) 0 0.7392 0.8366 8 7 ( 954 1dvp_A) ( 287 1b3u_A) 0.8748 0.1628 3.2037 ( 0 12 21) 0 0.8748 0.1860 8 43 ( 954 1dvp_A) ( 314 1b89_A) 0.8731 0.3182 5.5965 ( 0 3 21) 0 0.8731 0.3620 8 22 ( 954 1dvp_A) ( 444 1bpo_A) 0.6071 0.5382 6.9077 ( 1 7 15) 0 0.6071 0.5382 8 10 ( 954 1dvp_A) ( 789 1dce_A) 0.7481 0.3999 6.7710 ( 0 5 15) 0 0.7481 0.3999 8 15 ( 954 1dvp_A) ( 954 1dvp_A) 1.0000 1.0000 0.0000 ( 0 21 28) 0 1.0000 1.0000 8 8 ( 954 1dvp_A) ( 1069 1e7u_A) 0.8026 0.5720 6.0657 ( 1 11 21) 0 0.8026 0.5720 8 12 ( 954 1dvp_A) ( 1118 1ee4_A) 0.9782 0.2857 5.6498 ( 1 19 28) 0 0.9782 0.2857 8 28 ( 954 1dvp_A) ( 1205 1elk_A) 0.9998 0.8888 2.7358 ( 0 17 28) 0 0.9998 0.8888 8 9 ( 954 1dvp_A) ( 1206 1elr_A) 0.6248 0.7140 4.5972 ( 0 1 10) 0 0.6248 0.7140 8 7 ( 954 1dvp_A) ( 1210 1elw_A) 0.6249 0.7141 4.2182 ( 0 2 10) 0 0.7479 0.8531 8 7 ( 954 1dvp_A) ( 1315 1eyh_A) 0.8512 0.8512 3.1477 ( 1 15 21) 0 0.8512 0.8512 8 8 ( 954 1dvp_A) ( 1470 1fch_A) 0.6248 0.2941 4.5505 ( 0 2 10) 0 0.7488 0.3529 8 17 ( 954 1dvp_A) ( 1983 1gw5_A) 0.8741 0.2187 4.6441 ( 0 10 21) 0 0.8741 0.2221 8 32 ( 954 1dvp_A) ( 1984 1gw5_B) 0.6250 0.1562 3.2888 ( 0 4 10) 0 0.8716 0.2496 8 32 ( 954 1dvp_A) ( 2101 1h6k_A) 0.8722 0.5382 6.1655 ( 0 6 21) 0 0.8722 0.5382 8 13 ( 954 1dvp_A) ( 2102 1h6k_A) 0.6796 0.5735 3.5777 ( 1 9 15) 0 0.6796 0.5735 8 10 ( 954 1dvp_A) ( 2103 1h6k_A) 0.6978 0.4537 8.2563 ( 1 8 21) 0 0.6978 0.4720 8 15 ( 954 1dvp_A) ( 2197 1hf8_A) 0.7499 0.9998 2.7793 ( 0 11 15) 0 0.7499 0.9998 8 6 ( 954 1dvp_A) ( 2213 1hh8_A) 0.6249 0.4167 4.2839 ( 0 2 10) 0 0.6249 0.4717 8 12 ( 954 1dvp_A) ( 2252 1ho8_A) 0.8709 0.2592 6.7795 ( 0 13 21) 0 0.8709 0.2928 8 27 ( 954 1dvp_A) ( 2276 1hs6_A) 0.7481 0.5994 6.7818 ( 0 4 15) 0 0.7481 0.6462 8 10 ( 954 1dvp_A) ( 2292 1hu3_A) 0.7795 0.6632 3.6877 ( 1 10 21) 0 0.7795 0.6632 8 10 ( 954 1dvp_A) ( 2342 1hz4_A) 0.6249 0.2778 4.4849 ( 0 2 10) 0 0.6982 0.3677 8 18 ( 954 1dvp_A) ( 2493 1ihg_A) 0.6243 0.7129 6.6492 ( 0 2 10) 0 0.6243 0.7129 8 7 ( 954 1dvp_A) ( 2698 1j1j_A) 0.6245 0.5553 6.1622 ( 0 4 10) 0 0.7354 0.6584 8 9 ( 954 1dvp_A) ( 2829 1jdh_A) 0.8738 0.2059 4.9315 ( 0 11 21) 0 0.8738 0.2351 8 34 ( 954 1dvp_A) ( 3216 1k8k_G) 0.6244 0.7132 6.3222 ( 0 4 10) 0 0.6244 0.7132 8 7 ( 954 1dvp_A) ( 3353 1klx_A) 0.6242 0.6242 6.8076 ( 0 5 10) 0 0.6242 0.6242 8 8 ( 954 1dvp_A) ( 3392 1kps_B) 0.6795 0.6241 4.5378 ( 1 9 15) 0 0.6795 0.6241 8 9 ( 954 1dvp_A) ( 3424 1kt1_A) 0.6244 0.7131 6.4061 ( 0 2 10) 0 0.6244 0.7131 8 7 ( 954 1dvp_A) ( 3434 1ku1_A) 0.6244 0.4998 6.4570 ( 0 6 10) 0 0.6246 0.4999 8 10 ( 954 1dvp_A) ( 3540 1l5j_A) 0.7492 0.5997 5.4288 ( 0 5 15) 0 0.7492 0.5997 8 10 ( 954 1dvp_A) ( 3599 1ld8_A) 0.8741 0.4375 4.6521 ( 0 3 21) 0 0.8741 0.4375 8 16 ( 954 1dvp_A) ( 3602 1ldj_A) 0.8006 0.3672 7.3819 ( 1 11 21) 0 0.8006 0.4132 8 19 ( 954 1dvp_A) ( 3711 1lrv ) 0.8736 0.3889 5.1691 ( 0 6 21) 0 0.8736 0.3889 8 18 ( 954 1dvp_A) ( 3718 1lsh_A) 0.8702 0.3888 7.0490 ( 0 4 21) 0 0.8743 0.3889 8 18 ( 954 1dvp_A) ( 3882 1m8z_A) 0.8743 0.2500 4.3198 ( 0 11 21) 0 0.8743 0.2851 8 28 ( 954 1dvp_A) ( 4123 1n4k_A) 0.6491 0.6491 6.6673 ( 1 8 15) 0 0.6491 0.6491 8 8 ( 954 1dvp_A) ( 4166 1n8v_A) 0.6242 0.8300 6.8603 ( 0 6 10) 0 0.6242 0.8300 8 6 ( 954 1dvp_A) ( 4456 1nzn_A) 0.6247 0.8319 5.4871 ( 0 2 10) 0 0.6247 0.8319 8 6 ( 954 1dvp_A) ( 4792 1ouv_A) 0.7493 0.4000 5.2904 ( 0 7 15) 0 0.7493 0.4000 8 15 ( 954 1dvp_A) ( 4817 1oxj_A) 0.6249 0.7141 3.9405 ( 0 3 10) 0 0.7487 0.8546 8 7 ( 954 1dvp_A) ( 4841 1oyz_A) 0.8746 0.4118 3.7104 ( 0 8 21) 0 0.8746 0.4342 8 17 ( 954 1dvp_A) ( 4952 1paq_A) 0.5145 0.4531 3.8263 ( 1 6 10) 0 0.5145 0.4531 8 10 ( 954 1dvp_A) ( 5190 1q2z_A) 0.6246 0.8315 5.8788 ( 0 4 10) 0 0.6246 0.8315 8 6 ( 954 1dvp_A) ( 5284 1qbk_B) 0.8743 0.1489 4.4090 ( 0 10 21) 0 0.8743 0.1702 8 47 ( 954 1dvp_A) ( 5285 1qc7_A) 0.3848 0.3948 4.5503 ( 2 8 10) 0 0.3848 0.3948 8 6 ( 954 1dvp_A) ( 5326 1qgr_A) 0.8432 0.1429 5.3127 ( 1 14 21) 0 0.8745 0.1630 8 49 ( 954 1dvp_A) ( 5354 1qjb_A) 0.6247 0.5554 5.3649 ( 0 2 10) 0 0.7434 0.6630 8 9 ( 954 1dvp_A) ( 5417 1qqe_A) 0.7490 0.4000 5.7186 ( 0 4 15) 0 0.7490 0.4000 8 15 ( 954 1dvp_A) ( 5441 1qsa_A) 0.7486 0.2222 6.2914 ( 0 3 15) 0 0.8177 0.2591 8 27 ( 954 1dvp_A) ( 5595 1r8s_E) 0.7138 0.5872 4.9687 ( 1 11 15) 0 0.7138 0.5872 8 10 ( 954 1dvp_A) ( 6033 1ujk_A) 0.9775 0.9775 2.0242 ( 1 18 28) 0 0.9775 0.9775 8 8 ( 954 1dvp_A) ( 6077 1upk_A) 0.7638 0.3952 6.1854 ( 2 17 28) 0 0.7638 0.3952 8 20 ( 954 1dvp_A) ( 6128 1uw4_B) 0.8741 0.6362 4.5737 ( 0 10 21) 0 0.8741 0.6362 8 11 ( 954 1dvp_A) ( 6176 1v54_E) 0.6248 0.8327 4.5694 ( 0 0 10) 0 0.6248 0.8327 8 6 ( 954 1dvp_A) ( 6212 1vdu_A) 0.7492 0.5997 5.4703 ( 0 2 15) 0 0.7492 0.6231 8 10 -------------------------------------------------------------------------------------------------------------------------