------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 1323 1ezf_A) ( 844 1di1_A) 0.2999 0.4282 8.8373 ( 0 6 15) 0 0.3911 0.4449 20 14 ( 1323 1ezf_A) ( 1323 1ezf_A) 1.0000 1.0000 0.0000 ( 0 138 190) 0 1.0000 1.0000 20 20 ( 1323 1ezf_A) ( 3317 1kiy_A) 0.2500 0.2941 7.9691 ( 0 3 10) 0 0.4958 0.5791 20 17 ( 1323 1ezf_A) ( 4102 1n1b_A) 0.4859 0.6149 5.7530 ( 2 17 45) 0 0.5069 0.6149 20 15 ( 1323 1ezf_A) ( 5092 1ps1_A) 0.5344 0.6140 5.4660 ( 3 28 55) 0 0.5344 0.6140 20 17 ( 1323 1ezf_A) ( 5689 1rqj_A) 0.3000 0.3750 4.1963 ( 0 7 15) 0 0.3935 0.4813 20 16 ( 1323 1ezf_A) ( 5702 1rtr_A) 0.2500 0.3571 4.6390 ( 0 5 10) 0 0.4715 0.5931 20 14 ( 1323 1ezf_A) ( 5964 1uby ) 0.4943 0.6440 8.1624 ( 2 22 45) 0 0.4943 0.6440 20 15 ( 1323 1ezf_A) ( 6169 1v4e_A) 0.2801 0.2856 7.1499 ( 8 23 45) 0 0.4498 0.6415 20 14 ( 1323 1ezf_A) ( 6623 5eau ) 0.4859 0.5859 5.8003 ( 2 17 45) 0 0.4859 0.5859 20 16 -------------------------------------------------------------------------------------------------------------------------