------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 2634 1iw0_A) ( 2634 1iw0_A) 1.0000 1.0000 0.0000 ( 0 26 45) 0 1.0000 1.0000 10 10 ( 2634 1iw0_A) ( 2753 1j77_A) 0.5989 0.5989 7.7654 ( 0 8 15) 0 0.7971 0.7971 10 10 ( 2634 1iw0_A) ( 4120 1n45_A) 0.9999 0.9091 1.5596 ( 0 26 45) 0 0.9999 0.9091 10 11 ( 2634 1iw0_A) ( 4786 1otv_A) 0.8996 0.8179 3.6746 ( 0 21 36) 0 0.9480 0.8755 10 11 ( 2634 1iw0_A) ( 5207 1q4m_A) 0.7983 0.6660 6.0878 ( 0 12 28) 0 0.7983 0.6660 10 12 ( 2634 1iw0_A) ( 5608 1rcw_A) 0.9979 0.9078 4.8720 ( 0 22 45) 0 0.9979 0.9078 10 11 ( 2634 1iw0_A) ( 5704 1rtw_A) 0.8676 0.8676 7.2815 ( 1 15 36) 0 0.8676 0.8676 10 10 -------------------------------------------------------------------------------------------------------------------------