------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 2032 1h0o_A) ( 119 1afr_A) 0.4613 0.3529 7.7344 ( 0 5 15) 0 0.7860 0.6294 13 17 ( 2032 1h0o_A) ( 2032 1h0o_A) 1.0000 1.0000 0.0000 ( 0 50 78) 0 1.0000 1.0000 13 13 ( 2032 1h0o_A) ( 2948 1jkv_A) 0.3845 0.3845 7.2643 ( 0 1 10) 0 0.4613 0.4613 13 13 ( 2032 1h0o_A) ( 3294 1kgn_A) 0.9092 0.8475 2.5607 ( 2 37 66) 0 0.9092 0.8475 13 14 ( 2032 1h0o_A) ( 3587 1lb3_A) 0.3077 0.6659 6.1994 ( 0 1 6) 0 0.3846 0.8329 13 6 ( 2032 1h0o_A) ( 4030 1mty_B) 0.8431 0.6105 6.5859 ( 0 18 55) 0 0.8431 0.6438 13 18 ( 2032 1h0o_A) ( 4031 1mty_D) 0.6900 0.3749 7.8788 ( 0 7 36) 0 0.8583 0.4964 13 24 ( 2032 1h0o_A) ( 4077 1mxr_A) 0.9217 0.7055 3.5542 ( 1 36 66) 0 0.9217 0.7055 13 17 ( 2032 1h0o_A) ( 4270 1nig_A) 0.3842 0.6204 10.6502 ( 0 1 10) 0 0.4418 0.6204 13 8 ( 2032 1h0o_A) ( 4783 1otk_A) 0.6125 0.8715 5.2897 ( 1 17 28) 0 0.6150 0.8865 13 9 ( 2032 1h0o_A) ( 6297 1vjx_A) 0.3846 0.8318 5.5976 ( 0 3 10) 0 0.4495 0.8318 13 6 -------------------------------------------------------------------------------------------------------------------------