------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 1415 1f68_A) ( 1051 1e6i_A) 0.8333 0.8333 1.4299 ( 0 6 10) 0 0.8333 0.8333 6 6 ( 1415 1f68_A) ( 1246 1eqf_A) 0.8333 0.8333 1.6614 ( 0 5 10) 0 0.8333 0.8333 6 6 ( 1415 1f68_A) ( 1247 1eqf_A) 0.8333 0.8333 1.9502 ( 0 5 10) 0 0.8333 0.8333 6 6 ( 1415 1f68_A) ( 1415 1f68_A) 1.0000 1.0000 0.0000 ( 0 11 15) 0 1.0000 1.0000 6 6 ( 1415 1f68_A) ( 2590 1is2_A) 0.6576 0.4978 11.7057 ( 0 2 6) 0 0.6576 0.4978 6 8 ( 1415 1f68_A) ( 2591 1is2_A) 0.0999 0.0999 12.5121 ( 2 2 6) 0 0.0999 0.0999 6 10 ( 1415 1f68_A) ( 2967 1jm6_A) 0.3876 0.3787 10.6856 ( 1 4 6) 0 0.3876 0.3787 6 7 ( 1415 1f68_A) ( 5016 1pi1_A) 0.1996 0.1987 8.0755 ( 2 4 6) 0 0.1996 0.1987 6 8 ( 1415 1f68_A) ( 5648 1rj1_A) 0.6645 0.4995 8.1057 ( 0 0 6) 0 0.6645 0.4995 6 8 -------------------------------------------------------------------------------------------------------------------------