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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

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( 2054 1h32_A)  (  533 1c52  )     0.3333   0.5000   4.3962 (   0    5    6)   0     0.3776   0.5000   12   8
( 2054 1h32_A)  (  644 1cot  )     0.3185   0.4657  10.7456 (   1    5    6)   0     0.3953   0.5644   12   6
( 2054 1h32_A)  ( 1005 1e29_A)     0.4166   0.7140   4.4278 (   0    8   10)   0     0.4166   0.7140   12   7
( 2054 1h32_A)  ( 1333 1ezv_D)     0.3021   0.3671   5.4415 (   1    4    6)   0     0.3333   0.4999   12   8
( 2054 1h32_A)  ( 2054 1h32_A)     1.0000   1.0000   0.0000 (   0   56   66)   0     1.0000   1.0000   12  12
( 2054 1h32_A)  ( 2055 1h32_A)     0.4948   0.7925   1.5090 (   1   11   15)   0     0.4948   0.7925   12   7
( 2054 1h32_A)  ( 2566 1iqc_A)     0.3333   0.6649   7.6840 (   0    4    6)   0     0.3430   0.6649   12   6
( 2054 1h32_A)  ( 2567 1iqc_A)     0.4167   0.5000   1.4113 (   0    9   10)   0     0.4167   0.5000   12  10
( 2054 1h32_A)  ( 3450 1kv9_A)     0.4166   0.8325   4.7699 (   0    7   10)   0     0.4166   0.8325   12   6
( 2054 1h32_A)  ( 4964 1pby_A)     0.4166   0.7139   4.9491 (   0    8   10)   0     0.4166   0.7139   12   7
( 2054 1h32_A)  ( 4965 1pby_A)     0.3333   0.5712   5.5856 (   0    6    6)   0     0.4093   0.6311   12   7
( 2054 1h32_A)  ( 5367 1qks_A)     0.4167   0.7142   3.2498 (   0    9   10)   0     0.4167   0.7142   12   7
( 2054 1h32_A)  ( 6494 2mta_C)     0.3333   0.6666   2.8572 (   0    5    6)   0     0.3333   0.6666   12   6

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