------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 917 1dqe_A) ( 152 1alv_A) 0.5713 0.4444 5.1772 ( 0 5 6) 0 0.7122 0.5550 7 9 ( 917 1dqe_A) ( 209 1aui_B) 0.8535 0.6656 6.7555 ( 0 11 15) 0 0.8535 0.6656 7 9 ( 917 1dqe_A) ( 520 1c3y_A) 0.8562 0.9980 4.7780 ( 0 9 15) 0 0.8562 0.9980 7 6 ( 917 1dqe_A) ( 835 1dgu_A) 0.8516 0.5991 7.5132 ( 0 11 15) 0 0.8516 0.5991 7 10 ( 917 1dqe_A) ( 917 1dqe_A) 1.0000 1.0000 0.0000 ( 0 15 21) 0 1.0000 1.0000 7 7 ( 917 1dqe_A) ( 1142 1eg3_A) 0.5672 0.4978 11.6416 ( 0 2 6) 0 0.5672 0.5142 7 8 ( 917 1dqe_A) ( 1143 1eg3_A) 0.5713 0.6664 4.9736 ( 0 6 6) 0 0.5713 0.6664 7 6 ( 917 1dqe_A) ( 1306 1exr_A) 0.5711 0.5711 6.1009 ( 0 5 6) 0 0.5711 0.5711 7 7 ( 917 1dqe_A) ( 1508 1fi6_A) 0.5714 0.6666 3.7350 ( 0 5 6) 0 0.5714 0.6666 7 6 ( 917 1dqe_A) ( 2262 1hqv_A) 0.5714 0.5000 4.0269 ( 0 6 6) 0 0.5714 0.5000 7 8 ( 917 1dqe_A) ( 2512 1ij5_A) 0.5713 0.2857 5.1549 ( 0 6 6) 0 0.7128 0.3571 7 14 ( 917 1dqe_A) ( 2808 1jba_A) 0.8516 0.5991 7.5282 ( 0 11 15) 0 0.8516 0.5991 7 10 ( 917 1dqe_A) ( 2851 1jfk_A) 0.5713 0.3333 4.6936 ( 0 6 6) 0 0.5713 0.3333 7 12 ( 917 1dqe_A) ( 3221 1k8u_A) nil ( 917 1dqe_A) ( 3227 1k94_A) 0.5712 0.4444 5.3888 ( 0 6 6) 0 0.6305 0.5268 7 9 ( 917 1dqe_A) ( 3816 1m39_A) 0.4915 0.4915 7.0805 ( 1 6 6) 0 0.4915 0.4915 7 7 ( 917 1dqe_A) ( 3829 1m45_A) 0.5713 0.3333 4.8664 ( 0 6 6) 0 0.8540 0.4998 7 12 ( 917 1dqe_A) ( 4437 1nya_A) 0.5932 0.4715 8.2089 ( 1 7 10) 0 0.7136 0.4999 7 10 ( 917 1dqe_A) ( 4715 1omr_A) 0.8060 0.4267 6.8952 ( 1 12 15) 0 0.8060 0.4267 7 14 ( 917 1dqe_A) ( 4740 1ooh_A) 0.8562 0.9979 4.8320 ( 0 11 15) 0 0.8562 0.9979 7 6 ( 917 1dqe_A) ( 4870 1p28_A) 0.8560 0.9975 5.0794 ( 0 12 15) 0 0.8560 0.9975 7 6 ( 917 1dqe_A) ( 5465 1qv0_A) 0.6309 0.5270 6.4903 ( 1 8 10) 0 0.7132 0.5552 7 9 ( 917 1dqe_A) ( 5565 1r5r_A) 0.9532 0.9532 5.4730 ( 1 15 21) 0 0.9532 0.9532 7 7 ( 917 1dqe_A) ( 5774 1s6c_A) 0.8536 0.5994 6.7119 ( 0 11 15) 0 0.8536 0.5994 7 10 ( 917 1dqe_A) ( 5845 1sra ) 0.5286 0.5286 6.5939 ( 2 11 15) 0 0.5286 0.5286 7 7 ( 917 1dqe_A) ( 6021 1uhn_A) 0.8520 0.5449 7.3776 ( 0 10 15) 0 0.8520 0.5449 7 11 ( 917 1dqe_A) ( 6327 1wdc_B) 0.5713 0.4999 4.6172 ( 0 6 6) 0 0.5713 0.4999 7 8 ( 917 1dqe_A) ( 6416 2cbl_A) 0.5712 0.5712 5.4505 ( 0 5 6) 0 0.5712 0.5712 7 7 ( 917 1dqe_A) ( 6521 2pvb_A) 0.5713 0.6663 5.0966 ( 0 6 6) 0 0.5713 0.6663 7 6 ( 917 1dqe_A) ( 6527 2sas ) 0.7138 0.5554 5.2148 ( 0 9 10) 0 0.7138 0.5554 7 9 ( 917 1dqe_A) ( 6528 2scp_A) 0.7136 0.5553 5.6663 ( 0 9 10) 0 0.8535 0.6656 7 9 -------------------------------------------------------------------------------------------------------------------------