------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 1461 1fc3_A) ( 288 1b4a_A) 0.4531 0.5288 4.6433 ( 1 6 6) 0 0.4531 0.5288 8 6 ( 1461 1fc3_A) ( 328 1b9m_A) 0.4998 0.3999 6.7055 ( 0 5 6) 0 0.4998 0.3999 8 10 ( 1461 1fc3_A) ( 410 1bja_A) 0.6246 0.7136 5.5771 ( 0 10 10) 0 0.6246 0.7136 8 7 ( 1461 1fc3_A) ( 424 1bm9_A) 0.4525 0.5276 9.5686 ( 1 6 6) 0 0.4525 0.5276 8 6 ( 1461 1fc3_A) ( 509 1c20_A) 0.7497 0.7497 4.4273 ( 0 14 15) 0 0.7497 0.7497 8 8 ( 1461 1fc3_A) ( 576 1cf7_A) nil ( 1461 1fc3_A) ( 904 1dp7_P) nil ( 1461 1fc3_A) ( 997 1e17_A) 0.4531 0.5288 4.7339 ( 1 6 6) 0 0.4531 0.5288 8 6 ( 1461 1fc3_A) ( 1461 1fc3_A) 1.0000 1.0000 0.0000 ( 0 24 28) 0 1.0000 1.0000 8 8 ( 1461 1fc3_A) ( 1576 1fnn_A) 0.4529 0.4915 7.4495 ( 1 6 6) 0 0.4531 0.4917 8 7 ( 1461 1fc3_A) ( 1595 1fp1_D) 0.4999 0.4999 5.8961 ( 0 5 6) 0 0.4999 0.4999 8 8 ( 1461 1fc3_A) ( 1597 1fp2_A) 0.4529 0.4529 7.2958 ( 1 6 6) 0 0.4529 0.4529 8 8 ( 1461 1fc3_A) ( 1664 1fzp_B) 0.3668 0.3876 10.3537 ( 1 4 6) 0 0.4997 0.6654 8 6 ( 1461 1fc3_A) ( 1973 1gvj_A) 0.6245 0.4544 6.1561 ( 0 8 10) 0 0.6245 0.4544 8 11 ( 1461 1fc3_A) ( 1999 1gxq_A) 0.4999 0.4444 4.7561 ( 0 5 6) 0 0.4999 0.4444 8 9 ( 1461 1fc3_A) ( 2162 1hbx_G) nil ( 1461 1fc3_A) ( 2224 1hkq_A) 0.4531 0.3824 4.4033 ( 1 6 6) 0 0.4531 0.3824 8 10 ( 1461 1fc3_A) ( 2278 1hsj_A) 0.6246 0.7134 5.8819 ( 0 9 10) 0 0.6246 0.7134 8 7 ( 1461 1fc3_A) ( 2410 1i5z_A) nil ( 1461 1fc3_A) ( 2482 1ig6_A) 0.6076 0.6629 5.4171 ( 2 14 15) 0 0.6076 0.7547 8 6 ( 1461 1fc3_A) ( 2544 1in4_A) 0.4999 0.5713 4.5993 ( 0 5 6) 0 0.4999 0.5713 8 7 ( 1461 1fc3_A) ( 2703 1j1v_A) 0.5929 0.7254 5.4734 ( 1 9 10) 0 0.5929 0.7254 8 6 ( 1461 1fc3_A) ( 2862 1jgs_A) 0.6242 0.6242 6.8161 ( 0 9 10) 0 0.6242 0.6242 8 8 ( 1461 1fc3_A) ( 2871 1jhg_A) 0.4999 0.6661 5.7573 ( 0 5 6) 0 0.4999 0.6661 8 6 ( 1461 1fc3_A) ( 3237 1ka8_A) 0.4998 0.4998 6.4084 ( 0 6 6) 0 0.4998 0.4998 8 8 ( 1461 1fc3_A) ( 3296 1kgs_A) nil ( 1461 1fc3_A) ( 3338 1kkx_A) 0.6246 0.8318 5.6524 ( 0 9 10) 0 0.6246 0.8318 8 6 ( 1461 1fc3_A) ( 3438 1ku9_A) 0.6234 0.6234 8.1763 ( 0 8 10) 0 0.6234 0.6234 8 8 ( 1461 1fc3_A) ( 3604 1ldj_A) nil ( 1461 1fc3_A) ( 3639 1lj9_A) 0.5770 0.5770 6.5235 ( 1 8 10) 0 0.5770 0.5770 8 8 ( 1461 1fc3_A) ( 3681 1lnw_A) 0.4998 0.4998 6.1556 ( 0 5 6) 0 0.4998 0.4998 8 8 ( 1461 1fc3_A) ( 3746 1lva_A) 0.4997 0.6652 7.3094 ( 0 4 6) 0 0.4997 0.6652 8 6 ( 1461 1fc3_A) ( 3748 1lva_A) 0.4998 0.6657 6.6761 ( 0 5 6) 0 0.4998 0.6657 8 6 ( 1461 1fc3_A) ( 3934 1mij_A) 0.4202 0.4663 8.5222 ( 1 5 6) 0 0.4202 0.4663 8 6 ( 1461 1fc3_A) ( 3960 1mkm_A) 0.4999 0.6661 5.7716 ( 0 6 6) 0 0.4999 0.6661 8 6 ( 1461 1fc3_A) ( 4082 1mzb_A) 0.5000 0.4000 4.3374 ( 0 6 6) 0 0.5000 0.4000 8 10 ( 1461 1fc3_A) ( 4537 1o7f_A) 0.4529 0.4160 7.8229 ( 1 6 6) 0 0.4529 0.4160 8 9 ( 1461 1fc3_A) ( 4697 1okr_A) 0.4982 0.4982 11.1062 ( 0 5 6) 0 0.4982 0.4982 8 8 ( 1461 1fc3_A) ( 4714 1omi_A) 0.4997 0.3999 7.1838 ( 0 5 6) 0 0.4997 0.3999 8 10 ( 1461 1fc3_A) ( 4745 1opc ) nil ( 1461 1fc3_A) ( 4840 1oyw_A) 0.5764 0.4822 7.9811 ( 1 8 10) 0 0.5764 0.4822 8 10 ( 1461 1fc3_A) ( 4872 1p2f_A) nil ( 1461 1fc3_A) ( 4894 1p4x_A) 0.6242 0.6242 6.8474 ( 0 9 10) 0 0.6242 0.6242 8 8 ( 1461 1fc3_A) ( 4895 1p4x_A) 0.6245 0.7133 6.1346 ( 0 9 10) 0 0.6245 0.7133 8 7 ( 1461 1fc3_A) ( 4986 1pdn_C) 0.4963 0.4963 13.3666 ( 0 6 6) 0 0.4963 0.4963 8 8 ( 1461 1fc3_A) ( 5074 1pp7_U) 0.4528 0.3822 8.5431 ( 1 6 6) 0 0.6245 0.4998 8 10 ( 1461 1fc3_A) ( 5110 1pue_E) nil ( 1461 1fc3_A) ( 5180 1q1h_A) 0.5774 0.6315 4.2254 ( 1 8 10) 0 0.5774 0.6315 8 7 ( 1461 1fc3_A) ( 5508 1qzz_A) 0.4530 0.5287 6.2609 ( 1 6 6) 0 0.4530 0.5287 8 6 ( 1461 1fc3_A) ( 5612 1rep_C) 0.4999 0.3636 4.6508 ( 0 5 6) 0 0.4999 0.3636 8 11 ( 1461 1fc3_A) ( 5613 1rep_C) 0.4994 0.4994 8.2642 ( 0 5 6) 0 0.4994 0.4994 8 8 ( 1461 1fc3_A) ( 5750 1s29_A) 0.4204 0.4204 5.6815 ( 1 5 6) 0 0.4204 0.4204 8 8 ( 1461 1fc3_A) ( 5764 1s3j_A) 0.6239 0.5550 7.3518 ( 0 9 10) 0 0.6239 0.5550 8 9 ( 1461 1fc3_A) ( 5776 1s7a_A) 0.4985 0.6603 10.6789 ( 0 4 6) 0 0.4985 0.6603 8 6 ( 1461 1fc3_A) ( 5829 1smt_A) 0.4203 0.4454 7.1142 ( 1 5 6) 0 0.4204 0.4455 8 7 ( 1461 1fc3_A) ( 5959 1ub9_A) 0.4999 0.4999 5.9341 ( 0 5 6) 0 0.4999 0.4999 8 8 ( 1461 1fc3_A) ( 5972 1ucr_A) 0.4204 0.4667 4.9026 ( 1 5 6) 0 0.4204 0.4667 8 6 ( 1461 1fc3_A) ( 6025 1uhw_A) 0.4997 0.6655 6.9462 ( 0 5 6) 0 0.4997 0.6655 8 6 ( 1461 1fc3_A) ( 6346 1xgs_A) nil ( 1461 1fc3_A) ( 6450 2fok_A) 0.4997 0.3999 6.8009 ( 0 4 6) 0 0.4997 0.3999 8 10 ( 1461 1fc3_A) ( 6451 2fok_A) 0.4525 0.3521 9.6471 ( 1 6 6) 0 0.4525 0.3521 8 11 ( 1461 1fc3_A) ( 6476 2hts ) 0.4531 0.4918 3.3575 ( 1 6 6) 0 0.4531 0.4918 8 7 ( 1461 1fc3_A) ( 6480 2irf_G) nil -------------------------------------------------------------------------------------------------------------------------