------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 2094 1h67_A) ( 165 1aoa ) 0.9999 0.9999 2.5015 ( 0 13 15) 0 0.9999 0.9999 6 6 ( 2094 1h67_A) ( 166 1aoa ) 0.8332 0.8332 2.9922 ( 0 8 10) 0 0.8332 0.8332 6 6 ( 2094 1h67_A) ( 2094 1h67_A) 1.0000 1.0000 0.0000 ( 0 14 15) 0 1.0000 1.0000 6 6 ( 2094 1h67_A) ( 3678 1lns_A) 0.6665 0.5713 4.4089 ( 0 4 6) 0 0.6665 0.5713 6 7 ( 2094 1h67_A) ( 4906 1p5s_A) 0.9429 0.8289 4.2410 ( 1 14 15) 0 0.9429 0.8289 6 7 ( 2094 1h67_A) ( 4950 1pa7_A) 0.9999 0.9999 2.2336 ( 0 13 15) 0 0.9999 0.9999 6 6 -------------------------------------------------------------------------------------------------------------------------