------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 6157 1v2a_A) ( 225 1aw9 ) 0.9905 0.7477 7.1060 ( 0 6 15) 0 0.9905 0.7477 6 8 ( 6157 1v2a_A) ( 1124 1eem_A) 0.6631 0.6077 4.5209 ( 1 7 15) 0 0.6631 0.6077 6 8 ( 6157 1v2a_A) ( 1371 1f2e_A) 0.8317 0.7135 5.7379 ( 0 5 10) 0 0.8317 0.7135 6 7 ( 6157 1v2a_A) ( 1754 1g7o_A) 0.6659 0.6659 6.2520 ( 0 4 6) 0 0.6659 0.6659 6 6 ( 6157 1v2a_A) ( 1868 1glq_A) 0.6659 0.5711 6.2366 ( 0 2 6) 0 0.8302 0.7128 6 7 ( 6157 1v2a_A) ( 1883 1gnw_A) 0.8331 0.6249 3.5468 ( 0 6 10) 0 0.8331 0.6794 6 8 ( 6157 1v2a_A) ( 1987 1gwc_A) 0.9974 0.7494 5.1228 ( 0 8 15) 0 0.9974 0.7494 6 8 ( 6157 1v2a_A) ( 2662 1iyh_A) 0.6651 0.6651 7.4847 ( 0 2 6) 0 0.6660 0.6660 6 6 ( 6157 1v2a_A) ( 2962 1jlv_A) 0.6628 0.6628 9.4283 ( 0 3 6) 0 0.6628 0.6628 6 6 ( 6157 1v2a_A) ( 3110 1k0d_A) 0.6646 0.6646 7.9916 ( 0 2 6) 0 0.6646 0.6646 6 6 ( 6157 1v2a_A) ( 3116 1k0m_A) 0.9982 0.7496 4.6344 ( 0 8 15) 0 0.9982 0.7496 6 8 ( 6157 1v2a_A) ( 3169 1k3y_A) 0.6656 0.5709 6.7601 ( 0 2 6) 0 0.6656 0.5709 6 7 ( 6157 1v2a_A) ( 3642 1ljr_A) 0.6644 0.4995 8.2053 ( 0 1 6) 0 0.6644 0.6078 6 8 ( 6157 1v2a_A) ( 3774 1m0u_A) 0.6664 0.6664 4.9985 ( 0 3 6) 0 0.6664 0.6664 6 6 ( 6157 1v2a_A) ( 4114 1n2a_A) 0.6632 0.6632 3.8702 ( 1 7 15) 0 0.6632 0.6632 6 6 ( 6157 1v2a_A) ( 4261 1nhy_A) 0.8332 0.6250 2.7809 ( 0 5 10) 0 0.8332 0.6250 6 8 ( 6157 1v2a_A) ( 4613 1oe8_A) 0.6639 0.6639 8.6225 ( 0 3 6) 0 0.6639 0.6639 6 6 ( 6157 1v2a_A) ( 4699 1okt_A) 0.6657 0.6657 6.6973 ( 0 2 6) 0 0.6657 0.6657 6 6 ( 6157 1v2a_A) ( 4837 1oyj_A) 0.6618 0.5692 9.9679 ( 0 3 6) 0 0.6618 0.5692 6 7 ( 6157 1v2a_A) ( 5558 1r5a_A) 0.6632 0.6632 9.1535 ( 0 3 6) 0 0.6632 0.6632 6 6 ( 6157 1v2a_A) ( 6157 1v2a_A) 1.0000 1.0000 0.0000 ( 0 9 15) 0 1.0000 1.0000 6 6 -------------------------------------------------------------------------------------------------------------------------