------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 324 1b8z_A) ( 324 1b8z_A) 1.0000 1.0000 0.0000 ( 0 12 15) 0 1.0000 1.0000 6 6 ( 324 1b8z_A) ( 4804 1owf_A) 0.8775 0.7140 3.9367 ( 1 11 15) 0 0.8775 0.7140 6 8 ( 324 1b8z_A) ( 4805 1owf_B) 0.9991 0.7498 3.9402 ( 0 11 15) 0 0.9991 0.7498 6 8 -------------------------------------------------------------------------------------------------------------------------