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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

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( 1887 1go3_F)  (  834 1dgs_A)     0.4916   0.3026   6.0918 (   1    6    6)   0     0.4916   0.3026    7  13
( 1887 1go3_F)  ( 1552 1flo_A)     0.4452   0.3935   8.2725 (   1    5    6)   0     0.4452   0.3935    7   9
( 1887 1go3_F)  ( 1887 1go3_F)     1.0000   1.0000   0.0000 (   0   19   21)   0     1.0000   1.0000    7   7
( 1887 1go3_F)  ( 3866 1m6y_A)     0.5714   0.6666   3.2139 (   0    5    6)   0     0.5714   0.6666    7   6
( 1887 1go3_F)  ( 5722 1rxw_A)     0.5713   0.6663   5.1319 (   0    5    6)   0     0.5714   0.6666    7   6
( 1887 1go3_F)  ( 5905 1tfr  )     0.5714   0.5000   4.1055 (   0    5    6)   0     0.5714   0.5000    7   8
( 1887 1go3_F)  ( 6349 1xo1_A)     0.4453   0.4453   7.6663 (   1    5    6)   0     0.4453   0.4453    7   7

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