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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

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( 6268 1vin  )  (  461 1bu2_A)     0.7141   0.8329   4.1421 (   0    8   10)   0     0.7141   0.8329    7   6
( 6268 1vin  )  (  462 1bu2_A)     0.8570   0.9997   3.0279 (   0   12   15)   0     0.8570   0.9997    7   6
( 6268 1vin  )  ( 1405 1f5q_B)     0.7142   0.7142   3.4226 (   0    8   10)   0     0.7142   0.7142    7   7
( 6268 1vin  )  ( 1406 1f5q_B)     0.8088   0.8088   3.3447 (   1   12   15)   0     0.8088   0.8088    7   7
( 6268 1vin  )  ( 1710 1g3n_C)     0.7142   0.7142   3.5052 (   0    8   10)   0     0.7142   0.7142    7   7
( 6268 1vin  )  ( 1963 1gux_A)     0.7139   0.4999   4.7057 (   0    8   10)   0     0.7139   0.4999    7  10
( 6268 1vin  )  ( 1964 1gux_B)     0.8541   0.7484   6.4788 (   0   12   15)   0     0.8541   0.7484    7   8
( 6268 1vin  )  ( 2077 1h4l_D)     0.6315   0.6315   4.2736 (   1    8   10)   0     0.6315   0.6315    7   7
( 6268 1vin  )  ( 2949 1jkw  )     0.7136   0.8318   5.6368 (   0    8   10)   0     0.7136   0.8318    7   6
( 6268 1vin  )  ( 2950 1jkw  )     0.8570   0.8570   3.1478 (   0   11   15)   0     0.8570   0.8570    7   7
( 6268 1vin  )  ( 6267 1vin  )     0.7142   0.7142   3.3520 (   0    8   10)   0     0.7142   0.7142    7   7
( 6268 1vin  )  ( 6268 1vin  )     1.0000   1.0000   0.0000 (   0   17   21)   0     1.0000   1.0000    7   7

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