------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 2116 1h6y_A) ( 387 1bhg_A) 0.4999 0.6664 4.9531 ( 0 4 15) 0 0.5832 0.7771 12 9 ( 2116 1h6y_A) ( 607 1ciy ) 0.8200 0.9682 3.8251 ( 2 33 45) 0 0.8200 0.9682 12 10 ( 2116 1h6y_A) ( 700 1cx1_A) 0.5833 0.6999 3.2427 ( 0 12 21) 0 0.6664 0.7993 12 10 ( 2116 1h6y_A) ( 765 1d7p_M) 0.4999 0.4615 4.9593 ( 0 7 15) 0 0.4999 0.4615 12 13 ( 2116 1h6y_A) ( 1271 1eut ) 0.5832 0.7774 4.3329 ( 0 12 21) 0 0.5832 0.7774 12 9 ( 2116 1h6y_A) ( 1884 1gny_A) 0.7499 0.6923 3.0879 ( 0 31 36) 0 0.7499 0.7144 12 13 ( 2116 1h6y_A) ( 1918 1gqp_A) 0.5830 0.4666 6.0692 ( 0 5 21) 0 0.8311 0.6659 12 15 ( 2116 1h6y_A) ( 1954 1gu3_A) 0.7498 0.9994 3.5900 ( 0 22 36) 0 0.7498 0.9994 12 9 ( 2116 1h6y_A) ( 1959 1gui_A) 0.8331 0.9087 3.6102 ( 0 25 45) 0 0.8331 0.9087 12 11 ( 2116 1h6y_A) ( 1989 1gwm_A) 0.9053 0.9826 3.9100 ( 2 39 55) 0 0.9053 0.9826 12 11 ( 2116 1h6y_A) ( 2116 1h6y_A) 1.0000 1.0000 0.0000 ( 0 49 66) 0 1.0000 1.0000 12 12 ( 2116 1h6y_A) ( 2241 1hn0_A) 0.6666 0.6666 2.8076 ( 0 20 28) 0 0.6666 0.6666 12 12 ( 2116 1h6y_A) ( 2408 1i5p_A) 0.8142 0.8142 4.0572 ( 2 30 45) 0 0.8316 0.8316 12 12 ( 2116 1h6y_A) ( 2762 1j83_A) 0.7498 0.8995 3.8218 ( 0 22 36) 0 0.7498 0.8995 12 10 ( 2116 1h6y_A) ( 2872 1jhj_A) 0.5832 0.4999 4.7268 ( 0 8 21) 0 0.6663 0.5713 12 14 ( 2116 1h6y_A) ( 2886 1ji6_A) 0.8198 0.9676 4.4405 ( 2 33 45) 0 0.8198 0.9676 12 10 ( 2116 1h6y_A) ( 3063 1ju3_A) 0.4166 0.3846 6.5583 ( 0 7 10) 0 0.4166 0.3846 12 13 ( 2116 1h6y_A) ( 3098 1jz7_A) 0.4992 0.3528 9.1225 ( 0 9 15) 0 0.8156 0.5850 12 17 ( 2116 1h6y_A) ( 3124 1k12_A) 0.7493 0.6918 5.2664 ( 0 23 36) 0 0.7493 0.6918 12 13 ( 2116 1h6y_A) ( 3157 1k3i_A) 0.5833 0.7774 4.1694 ( 0 6 21) 0 0.6663 0.8872 12 9 ( 2116 1h6y_A) ( 3170 1k45_A) 0.8329 0.9085 4.0273 ( 0 24 45) 0 0.8329 0.9085 12 11 ( 2116 1h6y_A) ( 3280 1kex_A) 0.5833 0.6998 4.0555 ( 0 14 21) 0 0.5833 0.6998 12 10 ( 2116 1h6y_A) ( 3297 1kgy_A) 0.7498 0.8995 3.9032 ( 0 20 36) 0 0.7498 0.8995 12 10 ( 2116 1h6y_A) ( 3562 1l7l_A) 0.5600 0.7927 4.8748 ( 1 9 21) 0 0.5600 0.8568 12 7 ( 2116 1h6y_A) ( 3680 1lns_A) 0.4166 0.2632 5.4652 ( 0 6 10) 0 0.6599 0.4204 12 19 ( 2116 1h6y_A) ( 4423 1nx9_A) 0.4164 0.3124 8.3366 ( 0 6 10) 0 0.6660 0.5091 12 16 ( 2116 1h6y_A) ( 4496 1o59_A) 0.6664 0.7269 4.7867 ( 0 14 28) 0 0.6664 0.7269 12 11 ( 2116 1h6y_A) ( 4497 1o59_A) 0.6665 0.8883 4.1645 ( 0 15 28) 0 0.6665 0.8883 12 9 ( 2116 1h6y_A) ( 4599 1od3_A) 0.8198 0.9676 4.3974 ( 2 33 45) 0 0.8198 0.9676 12 10 ( 2116 1h6y_A) ( 4654 1oh4_A) 0.6665 0.5333 4.5020 ( 0 21 28) 0 0.8300 0.6656 12 15 ( 2116 1h6y_A) ( 4929 1p8j_A) 0.6665 0.9987 4.2852 ( 0 16 28) 0 0.6666 0.9993 12 8 ( 2116 1h6y_A) ( 5569 1r64_A) 0.7470 0.8135 5.6557 ( 1 23 36) 0 0.7470 0.8135 12 11 ( 2116 1h6y_A) ( 6050 1umh_A) 0.5287 0.5287 3.2071 ( 1 7 21) 0 0.6665 0.6665 12 12 ( 2116 1h6y_A) ( 6140 1uxz_A) 0.5833 0.5384 3.5148 ( 0 13 21) 0 0.7409 0.6869 12 13 ( 2116 1h6y_A) ( 6347 1xna_A) 0.6665 0.7271 3.9237 ( 0 14 28) 0 0.6665 0.7271 12 11 -------------------------------------------------------------------------------------------------------------------------