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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:
HELIX min length: 5 STRAND min length: 3
shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100
anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12
Legend:
( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2
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( 2241 1hn0_A) ( 387 1bhg_A) 0.5820 0.7723 8.4680 ( 0 12 21) 0 0.6368 0.7859 12 9
( 2241 1hn0_A) ( 607 1ciy ) 0.8193 0.9665 5.2124 ( 2 33 45) 0 0.8193 0.9665 12 10
( 2241 1hn0_A) ( 700 1cx1_A) 0.7487 0.8967 3.9086 ( 1 27 36) 0 0.7487 0.8967 12 10
( 2241 1hn0_A) ( 765 1d7p_M) 0.4996 0.4613 7.6338 ( 0 10 15) 0 0.6638 0.6135 12 13
( 2241 1hn0_A) ( 1271 1eut ) 0.5829 0.7758 6.5194 ( 0 13 21) 0 0.5829 0.7758 12 9
( 2241 1hn0_A) ( 1884 1gny_A) 0.8808 0.8215 4.7942 ( 3 43 55) 0 0.8808 0.8215 12 13
( 2241 1hn0_A) ( 1918 1gqp_A) 0.5833 0.4667 3.7191 ( 0 11 21) 0 0.6037 0.5096 12 15
( 2241 1hn0_A) ( 1954 1gu3_A) 0.5000 0.6665 3.9525 ( 0 9 15) 0 0.5832 0.7770 12 9
( 2241 1hn0_A) ( 1959 1gui_A) 0.5833 0.6363 3.6057 ( 0 10 21) 0 0.6652 0.7250 12 11
( 2241 1hn0_A) ( 1989 1gwm_A) 0.8312 0.9058 4.6878 ( 1 29 45) 0 0.8312 0.9058 12 11
( 2241 1hn0_A) ( 2116 1h6y_A) 0.6666 0.6666 2.8076 ( 0 20 28) 0 0.6666 0.6666 12 12
( 2241 1hn0_A) ( 2241 1hn0_A) 1.0000 1.0000 0.0000 ( 0 54 66) 0 1.0000 1.0000 12 12
( 2241 1hn0_A) ( 2408 1i5p_A) 0.8160 0.8160 4.8080 ( 2 31 45) 0 0.8685 0.8685 12 12
( 2241 1hn0_A) ( 2762 1j83_A) 0.7493 0.8984 5.1843 ( 0 26 36) 0 0.7493 0.8984 12 10
( 2241 1hn0_A) ( 2872 1jhj_A) 0.6581 0.5674 4.7178 ( 1 14 28) 0 0.6602 0.6141 12 14
( 2241 1hn0_A) ( 2886 1ji6_A) 0.7073 0.7649 4.4700 ( 4 34 45) 0 0.7073 0.7989 12 10
( 2241 1hn0_A) ( 3063 1ju3_A) 0.7073 0.6764 4.3784 ( 4 34 45) 0 0.8276 0.7654 12 13
( 2241 1hn0_A) ( 3098 1jz7_A) 0.4165 0.2941 7.8376 ( 0 8 10) 0 0.7349 0.5585 12 17
( 2241 1hn0_A) ( 3124 1k12_A) 0.5832 0.5384 4.3689 ( 0 15 21) 0 0.7317 0.6798 12 13
( 2241 1hn0_A) ( 3157 1k3i_A) 0.5828 0.7754 6.8284 ( 0 11 21) 0 0.7434 0.9733 12 9
( 2241 1hn0_A) ( 3170 1k45_A) 0.7496 0.8176 4.4656 ( 0 20 36) 0 0.7496 0.8176 12 11
( 2241 1hn0_A) ( 3280 1kex_A) 0.4996 0.5991 7.5021 ( 0 8 15) 0 0.7061 0.7631 12 10
( 2241 1hn0_A) ( 3297 1kgy_A) 0.4166 0.4999 5.0729 ( 0 6 10) 0 0.6663 0.7990 12 10
( 2241 1hn0_A) ( 3562 1l7l_A) 0.5599 0.7922 5.5951 ( 1 9 21) 0 0.5828 0.9924 12 7
( 2241 1hn0_A) ( 3680 1lns_A) 0.8198 0.5249 4.2348 ( 2 33 45) 0 0.8198 0.5249 12 19
( 2241 1hn0_A) ( 4423 1nx9_A) 0.8322 0.6247 3.5946 ( 1 33 45) 0 0.8322 0.6247 12 16
( 2241 1hn0_A) ( 4496 1o59_A) 0.5833 0.6363 3.3535 ( 0 11 21) 0 0.7483 0.8155 12 11
( 2241 1hn0_A) ( 4497 1o59_A) 0.5831 0.7770 5.2082 ( 0 14 21) 0 0.6662 0.8871 12 9
( 2241 1hn0_A) ( 4599 1od3_A) 0.7484 0.8960 4.8789 ( 1 27 36) 0 0.7484 0.8960 12 10
( 2241 1hn0_A) ( 4654 1oh4_A) 0.5830 0.4665 6.1346 ( 0 14 21) 0 0.6806 0.6013 12 15
( 2241 1hn0_A) ( 4929 1p8j_A) 0.6664 0.9978 4.9310 ( 0 18 28) 0 0.6664 0.9978 12 8
( 2241 1hn0_A) ( 5569 1r64_A) 0.6632 0.7219 6.7394 ( 1 19 28) 0 0.6652 0.7251 12 11
( 2241 1hn0_A) ( 6050 1umh_A) 0.6600 0.6600 4.9569 ( 1 15 28) 0 0.6640 0.6640 12 12
( 2241 1hn0_A) ( 6140 1uxz_A) 0.4165 0.3845 7.1239 ( 0 7 10) 0 0.9141 0.8444 12 13
( 2241 1hn0_A) ( 6347 1xna_A) 0.4999 0.5453 5.2500 ( 0 9 15) 0 0.6661 0.7264 12 11
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