------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 2408 1i5p_A) ( 387 1bhg_A) 0.4823 0.6035 6.8292 ( 1 8 15) 0 0.5829 0.7761 12 9 ( 2408 1i5p_A) ( 607 1ciy ) 0.8332 0.9996 3.1845 ( 0 35 45) 0 0.8332 0.9996 12 10 ( 2408 1i5p_A) ( 700 1cx1_A) 0.5833 0.6999 3.7542 ( 0 11 21) 0 0.8132 0.9530 12 10 ( 2408 1i5p_A) ( 765 1d7p_M) 0.4999 0.4615 5.3409 ( 0 8 15) 0 0.5736 0.5472 12 13 ( 2408 1i5p_A) ( 1271 1eut ) 0.6637 0.8766 5.6298 ( 1 19 28) 0 0.6637 0.8766 12 9 ( 2408 1i5p_A) ( 1884 1gny_A) 0.6644 0.6138 4.8012 ( 1 20 28) 0 0.6644 0.6138 12 13 ( 2408 1i5p_A) ( 1918 1gqp_A) 0.4999 0.4000 4.9387 ( 0 7 15) 0 0.4999 0.4000 12 15 ( 2408 1i5p_A) ( 1954 1gu3_A) 0.6656 0.8846 6.7331 ( 0 13 28) 0 0.6664 0.8879 12 9 ( 2408 1i5p_A) ( 1959 1gui_A) 0.7474 0.8142 2.8711 ( 1 22 36) 0 0.8312 0.9058 12 11 ( 2408 1i5p_A) ( 1989 1gwm_A) 0.8315 0.9063 4.0106 ( 1 29 45) 0 0.8315 0.9063 12 11 ( 2408 1i5p_A) ( 2116 1h6y_A) 0.8142 0.8142 4.0572 ( 2 30 45) 0 0.8316 0.8316 12 12 ( 2408 1i5p_A) ( 2241 1hn0_A) 0.4999 0.4999 5.0955 ( 0 8 15) 0 0.8685 0.8685 12 12 ( 2408 1i5p_A) ( 2408 1i5p_A) 1.0000 1.0000 0.0000 ( 0 54 66) 0 1.0000 1.0000 12 12 ( 2408 1i5p_A) ( 2762 1j83_A) 0.7495 0.8988 4.8459 ( 0 26 36) 0 0.7495 0.8988 12 10 ( 2408 1i5p_A) ( 2872 1jhj_A) 0.5832 0.4999 4.8598 ( 0 10 21) 0 0.6662 0.5712 12 14 ( 2408 1i5p_A) ( 2886 1ji6_A) 0.8331 0.9995 3.3223 ( 0 35 45) 0 0.8331 0.9995 12 10 ( 2408 1i5p_A) ( 3063 1ju3_A) 0.4167 0.3846 4.1379 ( 0 4 10) 0 0.6625 0.6126 12 13 ( 2408 1i5p_A) ( 3098 1jz7_A) 0.4997 0.3529 7.2077 ( 0 11 15) 0 0.8309 0.5878 12 17 ( 2408 1i5p_A) ( 3124 1k12_A) 0.5831 0.5383 5.2302 ( 0 12 21) 0 0.7265 0.6762 12 13 ( 2408 1i5p_A) ( 3157 1k3i_A) 0.6662 0.8871 5.3905 ( 0 15 28) 0 0.6662 0.8871 12 9 ( 2408 1i5p_A) ( 3170 1k45_A) 0.7499 0.8181 3.0874 ( 0 22 36) 0 0.7499 0.8181 12 11 ( 2408 1i5p_A) ( 3280 1kex_A) 0.4999 0.5999 4.7379 ( 0 8 15) 0 0.6237 0.7077 12 10 ( 2408 1i5p_A) ( 3297 1kgy_A) 0.8328 0.9986 4.3662 ( 0 32 45) 0 0.8328 0.9986 12 10 ( 2408 1i5p_A) ( 3562 1l7l_A) 0.5832 0.9976 5.0115 ( 0 7 21) 0 0.5832 0.9976 12 7 ( 2408 1i5p_A) ( 3680 1lns_A) 0.7489 0.4736 5.9664 ( 0 25 36) 0 0.7489 0.4736 12 19 ( 2408 1i5p_A) ( 4423 1nx9_A) 0.4165 0.3125 8.0397 ( 0 8 10) 0 0.8178 0.6212 12 16 ( 2408 1i5p_A) ( 4496 1o59_A) 0.6612 0.7190 5.6696 ( 1 16 28) 0 0.6664 0.7269 12 11 ( 2408 1i5p_A) ( 4497 1o59_A) 0.4998 0.6660 6.0878 ( 0 10 15) 0 0.5832 0.7774 12 9 ( 2408 1i5p_A) ( 4599 1od3_A) 0.7500 0.8999 2.2057 ( 0 27 36) 0 0.7500 0.8999 12 10 ( 2408 1i5p_A) ( 4654 1oh4_A) 0.4999 0.4000 5.9135 ( 0 12 15) 0 0.8296 0.6654 12 15 ( 2408 1i5p_A) ( 4929 1p8j_A) 0.6666 0.9995 3.3141 ( 0 17 28) 0 0.6666 0.9995 12 8 ( 2408 1i5p_A) ( 5569 1r64_A) 0.7495 0.8175 4.7544 ( 0 25 36) 0 0.7495 0.8175 12 11 ( 2408 1i5p_A) ( 6050 1umh_A) 0.6665 0.6665 4.3694 ( 0 11 28) 0 0.6665 0.6665 12 12 ( 2408 1i5p_A) ( 6140 1uxz_A) 0.8324 0.7686 3.5020 ( 1 34 45) 0 0.9085 0.8406 12 13 ( 2408 1i5p_A) ( 6347 1xna_A) 0.6664 0.7268 4.8661 ( 0 13 28) 0 0.6664 0.7268 12 11 -------------------------------------------------------------------------------------------------------------------------