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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:
HELIX min length: 5 STRAND min length: 3
shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100
anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12
Legend:
( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2
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( 3562 1l7l_A) ( 387 1bhg_A) 0.7134 0.5553 5.9068 ( 0 3 10) 0 0.9952 0.7764 7 9
( 3562 1l7l_A) ( 607 1ciy ) 0.7139 0.4999 4.6757 ( 0 3 10) 0 0.8391 0.6628 7 10
( 3562 1l7l_A) ( 700 1cx1_A) 0.7133 0.4998 6.1608 ( 0 5 10) 0 0.9980 0.6997 7 10
( 3562 1l7l_A) ( 765 1d7p_M) 0.7137 0.3846 5.4014 ( 0 0 10) 0 0.7137 0.3846 7 13
( 3562 1l7l_A) ( 1271 1eut ) 0.5712 0.4444 5.4890 ( 0 0 6) 0 0.8546 0.6659 7 9
( 3562 1l7l_A) ( 1884 1gny_A) 0.7929 0.5224 4.3494 ( 1 9 21) 0 0.8554 0.5224 7 13
( 3562 1l7l_A) ( 1918 1gqp_A) 0.7134 0.3333 6.0227 ( 0 2 10) 0 0.8552 0.4540 7 15
( 3562 1l7l_A) ( 1954 1gu3_A) 0.8558 0.6663 5.2702 ( 0 2 15) 0 0.9969 0.7769 7 9
( 3562 1l7l_A) ( 1959 1gui_A) 0.7101 0.4541 8.8100 ( 0 0 10) 0 0.8549 0.5452 7 11
( 3562 1l7l_A) ( 1989 1gwm_A) 0.7927 0.6017 4.8714 ( 1 9 21) 0 0.9981 0.6362 7 11
( 3562 1l7l_A) ( 2116 1h6y_A) 0.7927 0.5600 4.8748 ( 1 9 21) 0 0.8568 0.5600 7 12
( 3562 1l7l_A) ( 2241 1hn0_A) 0.7922 0.5599 5.5951 ( 1 9 21) 0 0.9924 0.5828 7 12
( 3562 1l7l_A) ( 2408 1i5p_A) 0.9976 0.5832 5.0115 ( 0 7 21) 0 0.9976 0.5832 7 12
( 3562 1l7l_A) ( 2762 1j83_A) 0.5712 0.4000 5.8005 ( 0 1 6) 0 0.7125 0.4997 7 10
( 3562 1l7l_A) ( 2872 1jhj_A) 0.9946 0.4998 6.1594 ( 0 4 21) 0 0.9946 0.4998 7 14
( 3562 1l7l_A) ( 2886 1ji6_A) 0.5714 0.4000 3.1056 ( 0 0 6) 0 0.9950 0.6992 7 10
( 3562 1l7l_A) ( 3063 1ju3_A) 0.5712 0.3077 5.3985 ( 0 2 6) 0 0.5712 0.3077 7 13
( 3562 1l7l_A) ( 3098 1jz7_A) 0.7137 0.2941 5.4703 ( 0 3 10) 0 0.9974 0.4117 7 17
( 3562 1l7l_A) ( 3124 1k12_A) 0.9957 0.5383 5.8138 ( 0 8 21) 0 0.9957 0.5383 7 13
( 3562 1l7l_A) ( 3157 1k3i_A) 0.9964 0.7767 5.5586 ( 0 5 21) 0 0.9964 0.7767 7 9
( 3562 1l7l_A) ( 3170 1k45_A) 0.9979 0.6361 4.8711 ( 0 5 21) 0 0.9979 0.6361 7 11
( 3562 1l7l_A) ( 3280 1kex_A) 0.7137 0.4999 5.3610 ( 0 1 10) 0 0.7137 0.4999 7 10
( 3562 1l7l_A) ( 3297 1kgy_A) 0.7126 0.4997 7.0082 ( 0 5 10) 0 0.7126 0.5045 7 10
( 3562 1l7l_A) ( 3562 1l7l_A) 1.0000 1.0000 0.0000 ( 0 10 21) 0 1.0000 1.0000 7 7
( 3562 1l7l_A) ( 3680 1lns_A) 0.5714 0.2105 4.2011 ( 0 1 6) 0 0.8535 0.3158 7 19
( 3562 1l7l_A) ( 4423 1nx9_A) 0.7103 0.3124 8.6983 ( 0 3 10) 0 0.8567 0.4282 7 16
( 3562 1l7l_A) ( 4496 1o59_A) 0.7130 0.4544 6.5720 ( 0 0 10) 0 0.9958 0.6359 7 11
( 3562 1l7l_A) ( 4497 1o59_A) 0.7133 0.5553 6.1036 ( 0 3 10) 0 0.7133 0.5553 7 9
( 3562 1l7l_A) ( 4599 1od3_A) 0.5707 0.3999 7.4630 ( 0 2 6) 0 0.7132 0.4998 7 10
( 3562 1l7l_A) ( 4654 1oh4_A) 0.5706 0.2666 7.8124 ( 0 2 6) 0 0.7069 0.3332 7 15
( 3562 1l7l_A) ( 4929 1p8j_A) 0.8554 0.7491 5.6442 ( 0 7 15) 0 0.8554 0.7491 7 8
( 3562 1l7l_A) ( 5569 1r64_A) 0.5712 0.3636 5.5128 ( 0 0 6) 0 0.7924 0.6016 7 11
( 3562 1l7l_A) ( 6050 1umh_A) 0.9968 0.5831 5.3941 ( 0 5 21) 0 0.9970 0.5831 7 12
( 3562 1l7l_A) ( 6140 1uxz_A) 0.7917 0.5223 6.0945 ( 1 9 21) 0 0.9941 0.5382 7 13
( 3562 1l7l_A) ( 6347 1xna_A) 0.7138 0.4545 5.0023 ( 0 0 10) 0 0.7138 0.5186 7 11
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