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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:
HELIX min length: 5 STRAND min length: 3
shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100
anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12
Legend:
( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2
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( 4654 1oh4_A) ( 387 1bhg_A) 0.3333 0.5550 7.0841 ( 0 8 10) 0 0.5326 0.8800 15 9
( 4654 1oh4_A) ( 607 1ciy ) 0.6662 0.9965 5.5310 ( 0 38 45) 0 0.6662 0.9965 15 10
( 4654 1oh4_A) ( 700 1cx1_A) 0.4665 0.6991 6.1092 ( 0 15 21) 0 0.5987 0.8904 15 10
( 4654 1oh4_A) ( 765 1d7p_M) 0.4666 0.5383 5.6079 ( 0 16 21) 0 0.4892 0.5383 15 13
( 4654 1oh4_A) ( 1271 1eut ) 0.4665 0.7758 6.5357 ( 0 15 21) 0 0.4666 0.7770 15 9
( 4654 1oh4_A) ( 1884 1gny_A) 0.7329 0.8453 4.7419 ( 0 46 55) 0 0.7329 0.8453 15 13
( 4654 1oh4_A) ( 1918 1gqp_A) 0.5995 0.5995 6.3922 ( 0 24 36) 0 0.6780 0.6780 15 15
( 4654 1oh4_A) ( 1954 1gu3_A) 0.5998 0.9977 4.9809 ( 0 22 36) 0 0.5998 0.9977 15 9
( 4654 1oh4_A) ( 1959 1gui_A) 0.4000 0.5453 5.4456 ( 0 8 15) 0 0.5959 0.7995 15 11
( 4654 1oh4_A) ( 1989 1gwm_A) 0.7327 0.9969 5.3499 ( 0 39 55) 0 0.7327 0.9969 15 11
( 4654 1oh4_A) ( 2116 1h6y_A) 0.5761 0.6140 5.6916 ( 6 39 55) 0 0.6656 0.8300 15 12
( 4654 1oh4_A) ( 2241 1hn0_A) 0.4666 0.5832 4.4469 ( 0 16 21) 0 0.6013 0.6806 15 12
( 4654 1oh4_A) ( 2408 1i5p_A) 0.3999 0.4997 7.0816 ( 0 8 15) 0 0.6654 0.8296 15 12
( 4654 1oh4_A) ( 2762 1j83_A) 0.5996 0.8967 6.2113 ( 0 30 36) 0 0.5997 0.8976 15 10
( 4654 1oh4_A) ( 2872 1jhj_A) 0.5997 0.6425 5.5379 ( 0 25 36) 0 0.5997 0.6425 15 14
( 4654 1oh4_A) ( 2886 1ji6_A) 0.5332 0.7992 5.0032 ( 0 22 28) 0 0.5332 0.7992 15 10
( 4654 1oh4_A) ( 3063 1ju3_A) 0.4665 0.5380 7.1058 ( 0 14 21) 0 0.5331 0.6150 15 13
( 4654 1oh4_A) ( 3098 1jz7_A) 0.7311 0.6459 7.2399 ( 0 46 55) 0 0.7311 0.6459 15 17
( 4654 1oh4_A) ( 3124 1k12_A) 0.4666 0.5384 4.2054 ( 0 18 21) 0 0.4956 0.5468 15 13
( 4654 1oh4_A) ( 3157 1k3i_A) 0.4000 0.6661 5.6854 ( 0 9 15) 0 0.5536 0.8873 15 9
( 4654 1oh4_A) ( 3170 1k45_A) 0.6652 0.9021 7.4022 ( 0 28 45) 0 0.6652 0.9021 15 11
( 4654 1oh4_A) ( 3280 1kex_A) 0.5330 0.7978 6.4512 ( 0 21 28) 0 0.5330 0.7978 15 10
( 4654 1oh4_A) ( 3297 1kgy_A) 0.6663 0.9973 5.1469 ( 0 36 45) 0 0.6663 0.9973 15 10
( 4654 1oh4_A) ( 3562 1l7l_A) 0.2667 0.5712 5.2804 ( 0 2 6) 0 0.3332 0.7069 15 7
( 4654 1oh4_A) ( 3680 1lns_A) 0.3333 0.2632 4.5257 ( 0 7 10) 0 0.4958 0.4307 15 19
( 4654 1oh4_A) ( 4423 1nx9_A) 0.3998 0.3748 8.9323 ( 0 12 15) 0 0.5733 0.5523 15 16
( 4654 1oh4_A) ( 4496 1o59_A) 0.5332 0.7266 5.3394 ( 0 18 28) 0 0.5332 0.7267 15 11
( 4654 1oh4_A) ( 4497 1o59_A) 0.5331 0.8861 6.0103 ( 0 22 28) 0 0.5994 0.9924 15 9
( 4654 1oh4_A) ( 4599 1od3_A) 0.3333 0.4999 5.0420 ( 0 6 10) 0 0.5324 0.7933 15 10
( 4654 1oh4_A) ( 4654 1oh4_A) 1.0000 1.0000 0.0000 ( 0 94 105) 0 1.0000 1.0000 15 15
( 4654 1oh4_A) ( 4929 1p8j_A) 0.5329 0.9911 6.9795 ( 0 20 28) 0 0.5331 0.9941 15 8
( 4654 1oh4_A) ( 5569 1r64_A) 0.5998 0.8171 5.2431 ( 0 29 36) 0 0.5998 0.8171 15 11
( 4654 1oh4_A) ( 6050 1umh_A) 0.5997 0.7492 5.4620 ( 0 18 36) 0 0.5997 0.7492 15 12
( 4654 1oh4_A) ( 6140 1uxz_A) 0.7326 0.8447 5.4520 ( 0 43 55) 0 0.7326 0.8447 15 13
( 4654 1oh4_A) ( 6347 1xna_A) 0.5332 0.7268 4.9351 ( 0 16 28) 0 0.5332 0.7268 15 11
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