------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 6050 1umh_A) ( 387 1bhg_A) 0.6659 0.8857 6.2638 ( 0 6 28) 0 0.6659 0.8857 12 9 ( 6050 1umh_A) ( 607 1ciy ) 0.4999 0.5998 4.7662 ( 0 2 15) 0 0.6369 0.7335 12 10 ( 6050 1umh_A) ( 700 1cx1_A) 0.7297 0.8529 5.6696 ( 1 13 36) 0 0.7297 0.8529 12 10 ( 6050 1umh_A) ( 765 1d7p_M) 0.5000 0.4615 4.3561 ( 0 1 15) 0 0.5000 0.4739 12 13 ( 6050 1umh_A) ( 1271 1eut ) 0.6663 0.8873 5.2673 ( 0 6 28) 0 0.6663 0.8873 12 9 ( 6050 1umh_A) ( 1884 1gny_A) 0.7835 0.7345 4.7360 ( 2 23 45) 0 0.7835 0.7345 12 13 ( 6050 1umh_A) ( 1918 1gqp_A) 0.6662 0.5332 5.6196 ( 0 6 28) 0 0.6662 0.5332 12 15 ( 6050 1umh_A) ( 1954 1gu3_A) 0.7235 0.9054 4.4263 ( 1 12 36) 0 0.7235 0.9054 12 9 ( 6050 1umh_A) ( 1959 1gui_A) 0.8261 0.8980 5.1809 ( 1 20 45) 0 0.8261 0.8980 12 11 ( 6050 1umh_A) ( 1989 1gwm_A) 0.7660 0.8125 4.7441 ( 2 21 45) 0 0.7660 0.8125 12 11 ( 6050 1umh_A) ( 2116 1h6y_A) 0.5287 0.5287 3.2071 ( 1 7 21) 0 0.6665 0.6665 12 12 ( 6050 1umh_A) ( 2241 1hn0_A) 0.6600 0.6600 4.9569 ( 1 15 28) 0 0.6640 0.6640 12 12 ( 6050 1umh_A) ( 2408 1i5p_A) 0.6665 0.6665 4.3694 ( 0 11 28) 0 0.6665 0.6665 12 12 ( 6050 1umh_A) ( 2762 1j83_A) 0.7487 0.8968 6.1342 ( 0 18 36) 0 0.7487 0.8968 12 10 ( 6050 1umh_A) ( 2872 1jhj_A) 0.6664 0.5713 4.7403 ( 0 6 28) 0 0.6664 0.5713 12 14 ( 6050 1umh_A) ( 2886 1ji6_A) 0.4166 0.4999 5.3633 ( 0 2 10) 0 0.6370 0.7335 12 10 ( 6050 1umh_A) ( 3063 1ju3_A) 0.4999 0.4615 5.3950 ( 0 3 15) 0 0.4999 0.4615 12 13 ( 6050 1umh_A) ( 3098 1jz7_A) 0.7824 0.5782 6.2260 ( 2 23 45) 0 0.7824 0.5782 12 17 ( 6050 1umh_A) ( 3124 1k12_A) 0.6663 0.6151 5.3192 ( 0 6 28) 0 0.6663 0.6151 12 13 ( 6050 1umh_A) ( 3157 1k3i_A) 0.6661 0.8863 5.9126 ( 0 6 28) 0 0.6661 0.8863 12 9 ( 6050 1umh_A) ( 3170 1k45_A) 0.8318 0.9068 5.6005 ( 0 19 45) 0 0.8318 0.9068 12 11 ( 6050 1umh_A) ( 3280 1kex_A) 0.6664 0.7995 4.5645 ( 0 6 28) 0 0.6664 0.7995 12 10 ( 6050 1umh_A) ( 3297 1kgy_A) 0.7494 0.8985 5.0451 ( 0 18 36) 0 0.7494 0.8985 12 10 ( 6050 1umh_A) ( 3562 1l7l_A) 0.5831 0.9968 5.3941 ( 0 5 21) 0 0.5831 0.9970 12 7 ( 6050 1umh_A) ( 3680 1lns_A) 0.4166 0.2632 5.1940 ( 0 2 10) 0 0.6651 0.4209 12 19 ( 6050 1umh_A) ( 4423 1nx9_A) 0.4164 0.3124 8.8086 ( 0 3 10) 0 0.5806 0.5029 12 16 ( 6050 1umh_A) ( 4496 1o59_A) 0.6664 0.7268 4.8725 ( 0 5 28) 0 0.6664 0.7268 12 11 ( 6050 1umh_A) ( 4497 1o59_A) 0.6664 0.8879 4.6286 ( 0 6 28) 0 0.6664 0.8879 12 9 ( 6050 1umh_A) ( 4599 1od3_A) 0.8329 0.9988 4.1835 ( 0 23 45) 0 0.8329 0.9988 12 10 ( 6050 1umh_A) ( 4654 1oh4_A) 0.8321 0.6662 5.3783 ( 0 21 45) 0 0.8321 0.6662 12 15 ( 6050 1umh_A) ( 4929 1p8j_A) 0.5833 0.8746 3.7946 ( 0 4 21) 0 0.5833 0.8746 12 8 ( 6050 1umh_A) ( 5569 1r64_A) 0.6905 0.7327 5.0471 ( 2 19 36) 0 0.6905 0.7327 12 11 ( 6050 1umh_A) ( 6050 1umh_A) 1.0000 1.0000 0.0000 ( 0 42 66) 0 1.0000 1.0000 12 12 ( 6050 1umh_A) ( 6140 1uxz_A) 0.8293 0.7665 4.1765 ( 1 23 45) 0 0.8293 0.7665 12 13 ( 6050 1umh_A) ( 6347 1xna_A) 0.6666 0.7271 3.8111 ( 0 6 28) 0 0.6666 0.7271 12 11 -------------------------------------------------------------------------------------------------------------------------