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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:
HELIX min length: 5 STRAND min length: 3
shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100
anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12
Legend:
( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2
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( 607 1ciy ) ( 387 1bhg_A) 0.5999 0.6664 4.6929 ( 0 10 15) 0 0.6995 0.7769 10 9
( 607 1ciy ) ( 607 1ciy ) 1.0000 1.0000 0.0000 ( 0 40 45) 0 1.0000 1.0000 10 10
( 607 1ciy ) ( 700 1cx1_A) 0.7960 0.7960 4.6840 ( 1 22 28) 0 0.7960 0.7960 10 10
( 607 1ciy ) ( 765 1d7p_M) 0.5999 0.4615 4.7319 ( 0 11 15) 0 0.6909 0.5562 10 13
( 607 1ciy ) ( 1271 1eut ) 0.6996 0.7772 4.8645 ( 0 15 21) 0 0.6996 0.7772 10 9
( 607 1ciy ) ( 1884 1gny_A) 0.9968 0.7684 4.9303 ( 1 40 45) 0 0.9968 0.7684 10 13
( 607 1ciy ) ( 1918 1gqp_A) 0.8927 0.5990 5.5884 ( 1 23 36) 0 0.8927 0.5990 10 15
( 607 1ciy ) ( 1954 1gu3_A) 0.7902 0.8725 3.9945 ( 1 17 28) 0 0.7981 0.8856 10 9
( 607 1ciy ) ( 1959 1gui_A) 0.8931 0.8139 4.2372 ( 1 22 36) 0 0.8931 0.8139 10 11
( 607 1ciy ) ( 1989 1gwm_A) 0.9972 0.9074 3.2223 ( 1 32 45) 0 0.9972 0.9074 10 11
( 607 1ciy ) ( 2116 1h6y_A) 0.9682 0.8200 3.8251 ( 2 33 45) 0 0.9682 0.8200 10 12
( 607 1ciy ) ( 2241 1hn0_A) 0.9665 0.8193 5.2124 ( 2 33 45) 0 0.9665 0.8193 10 12
( 607 1ciy ) ( 2408 1i5p_A) 0.9996 0.8332 3.1845 ( 0 35 45) 0 0.9996 0.8332 10 12
( 607 1ciy ) ( 2762 1j83_A) 0.8987 0.8987 4.9432 ( 0 29 36) 0 0.8987 0.8987 10 10
( 607 1ciy ) ( 2872 1jhj_A) 0.7996 0.5714 4.2418 ( 0 18 28) 0 0.8952 0.6420 10 14
( 607 1ciy ) ( 2886 1ji6_A) 0.9999 0.9999 2.1598 ( 0 39 45) 0 0.9999 0.9999 10 10
( 607 1ciy ) ( 3063 1ju3_A) 0.4994 0.3845 8.2730 ( 0 4 10) 0 0.7988 0.6151 10 13
( 607 1ciy ) ( 3098 1jz7_A) 0.8641 0.5266 4.9142 ( 2 28 36) 0 0.9778 0.5866 10 17
( 607 1ciy ) ( 3124 1k12_A) 0.8963 0.6913 5.4084 ( 1 30 36) 0 0.8963 0.6913 10 13
( 607 1ciy ) ( 3157 1k3i_A) 0.7980 0.8855 6.3468 ( 0 18 28) 0 0.7980 0.8855 10 9
( 607 1ciy ) ( 3170 1k45_A) 0.8986 0.8173 5.0241 ( 0 22 36) 0 0.8986 0.8173 10 11
( 607 1ciy ) ( 3280 1kex_A) 0.6991 0.6991 6.2007 ( 0 14 21) 0 0.6991 0.6991 10 10
( 607 1ciy ) ( 3297 1kgy_A) 0.9984 0.9984 4.4989 ( 0 35 45) 0 0.9984 0.9984 10 10
( 607 1ciy ) ( 3562 1l7l_A) 0.4999 0.7139 4.6757 ( 0 3 10) 0 0.6628 0.8391 10 7
( 607 1ciy ) ( 3680 1lns_A) 0.8993 0.4737 4.2094 ( 0 30 36) 0 0.8993 0.4737 10 19
( 607 1ciy ) ( 4423 1nx9_A) 0.8974 0.5622 4.3623 ( 1 30 36) 0 0.8974 0.5622 10 16
( 607 1ciy ) ( 4496 1o59_A) 0.7989 0.7266 5.4772 ( 0 18 28) 0 0.7989 0.7266 10 11
( 607 1ciy ) ( 4497 1o59_A) 0.7984 0.8861 6.0328 ( 0 22 28) 0 0.7992 0.8875 10 9
( 607 1ciy ) ( 4599 1od3_A) 0.8998 0.8998 3.2441 ( 0 30 36) 0 0.8998 0.8998 10 10
( 607 1ciy ) ( 4654 1oh4_A) 0.9965 0.6662 5.5310 ( 0 38 45) 0 0.9965 0.6662 10 15
( 607 1ciy ) ( 4929 1p8j_A) 0.7999 0.9997 3.0154 ( 0 21 28) 0 0.7999 0.9997 10 8
( 607 1ciy ) ( 5569 1r64_A) 0.8990 0.8176 4.5634 ( 0 29 36) 0 0.8990 0.8176 10 11
( 607 1ciy ) ( 6050 1umh_A) 0.6997 0.5832 4.4492 ( 0 4 21) 0 0.7335 0.6369 10 12
( 607 1ciy ) ( 6140 1uxz_A) 0.9978 0.7686 3.9413 ( 1 37 45) 0 0.9978 0.7686 10 13
( 607 1ciy ) ( 6347 1xna_A) 0.7997 0.7271 4.0773 ( 0 16 28) 0 0.7997 0.7271 10 11
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