------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 1008 1e2w_A) ( 34 1a3q_A) 0.5999 0.5999 4.3443 ( 0 8 15) 0 0.6989 0.6989 10 10 ( 1008 1e2w_A) ( 159 1amx ) 0.7990 0.5712 5.3009 ( 0 6 28) 0 0.7990 0.5712 10 14 ( 1008 1e2w_A) ( 169 1aoh_A) 0.6998 0.6362 4.1281 ( 0 9 21) 0 0.6998 0.6362 10 11 ( 1008 1e2w_A) ( 245 1ayo_A) 0.7995 0.7270 4.4319 ( 0 8 28) 0 0.7995 0.7270 10 11 ( 1008 1e2w_A) ( 374 1bg1_A) 0.6972 0.3887 8.1406 ( 0 10 21) 0 0.7792 0.4433 10 18 ( 1008 1e2w_A) ( 1008 1e2w_A) 1.0000 1.0000 0.0000 ( 0 27 45) 0 1.0000 1.0000 10 10 ( 1008 1e2w_A) ( 1040 1e5c_A) 0.4000 0.5000 4.1606 ( 0 1 6) 0 0.4000 0.5000 10 8 ( 1008 1e2w_A) ( 1087 1eaq_A) 0.3999 0.3636 6.0027 ( 0 1 6) 0 0.4999 0.4545 10 11 ( 1008 1e2w_A) ( 1300 1exh ) 0.6997 0.6997 4.7041 ( 0 11 21) 0 0.6997 0.6997 10 10 ( 1008 1e2w_A) ( 1351 1f0l_A) 0.6993 0.4374 5.7975 ( 0 10 21) 0 0.6993 0.4374 10 16 ( 1008 1e2w_A) ( 1689 1g1k_A) 0.6995 0.5383 5.3070 ( 0 8 21) 0 0.6995 0.5383 10 13 ( 1008 1e2w_A) ( 1760 1g87_A) 0.4999 0.4545 5.1883 ( 0 4 10) 0 0.4999 0.4545 10 11 ( 1008 1e2w_A) ( 2097 1h6f_A) 0.3998 0.2857 8.2883 ( 0 3 6) 0 0.3998 0.2857 10 14 ( 1008 1e2w_A) ( 2375 1i31_A) 0.6991 0.4117 6.0859 ( 0 5 21) 0 0.6991 0.4117 10 17 ( 1008 1e2w_A) ( 2769 1j8r_A) 0.6975 0.4995 7.9414 ( 0 8 21) 0 0.6975 0.4995 10 14 ( 1008 1e2w_A) ( 3343 1klf_B) 0.4000 0.3077 5.8122 ( 0 1 6) 0 0.6973 0.5377 10 13 ( 1008 1e2w_A) ( 3344 1klf_B) 0.5993 0.7478 7.0619 ( 0 6 15) 0 0.5993 0.7478 10 8 ( 1008 1e2w_A) ( 3803 1m2o_A) 0.6999 0.5833 3.7908 ( 0 7 21) 0 0.6999 0.5833 10 12 ( 1008 1e2w_A) ( 3986 1mnn_A) 0.5994 0.2727 6.6891 ( 0 8 15) 0 0.5994 0.2727 10 22 ( 1008 1e2w_A) ( 4098 1n12_A) 0.5991 0.7472 7.4545 ( 0 8 15) 0 0.5991 0.7472 10 8 ( 1008 1e2w_A) ( 4141 1n67_A) 0.6995 0.6361 5.2720 ( 0 6 21) 0 0.6995 0.6361 10 11 ( 1008 1e2w_A) ( 4142 1n67_A) 0.6999 0.5384 3.1103 ( 0 8 21) 0 0.6999 0.5384 10 13 ( 1008 1e2w_A) ( 4187 1nbc_A) 0.6984 0.6354 7.0603 ( 0 11 21) 0 0.6984 0.6354 10 11 ( 1008 1e2w_A) ( 4232 1nfi_A) 0.4999 0.6248 4.7224 ( 0 6 10) 0 0.4999 0.6248 10 8 ( 1008 1e2w_A) ( 4570 1o9w_A) 0.6997 0.4666 4.6216 ( 0 9 21) 0 0.6997 0.4666 10 15 ( 1008 1e2w_A) ( 4910 1p5v_B) 0.5997 0.8552 5.7864 ( 0 6 15) 0 0.5997 0.8552 10 7 ( 1008 1e2w_A) ( 4922 1p7h_L) 0.6996 0.6361 5.0485 ( 0 10 21) 0 0.6996 0.6361 10 11 ( 1008 1e2w_A) ( 4976 1pd1_A) 0.6998 0.5833 4.2101 ( 0 9 21) 0 0.6998 0.5833 10 12 ( 1008 1e2w_A) ( 4985 1pdk_B) 0.5991 0.6652 7.3756 ( 0 6 15) 0 0.5991 0.6652 10 9 ( 1008 1e2w_A) ( 5278 1qba ) 0.5995 0.5451 6.3913 ( 0 8 15) 0 0.5999 0.5454 10 11 ( 1008 1e2w_A) ( 5520 1r17_A) 0.6989 0.5829 6.4875 ( 0 5 21) 0 0.6989 0.5829 10 12 ( 1008 1e2w_A) ( 5521 1r17_A) 0.6998 0.6362 4.1620 ( 0 7 21) 0 0.6998 0.6362 10 11 ( 1008 1e2w_A) ( 6068 1uol_A) 0.6999 0.5384 3.8331 ( 0 11 21) 0 0.6999 0.5384 10 13 ( 1008 1e2w_A) ( 6119 1uur_A) 0.4000 0.2667 5.4286 ( 0 2 6) 0 0.4000 0.2667 10 15 -------------------------------------------------------------------------------------------------------------------------