------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 1087 1eaq_A) ( 34 1a3q_A) 0.6362 0.6998 4.3796 ( 0 17 21) 0 0.6362 0.6998 11 10 ( 1087 1eaq_A) ( 159 1amx ) 0.5453 0.4285 5.3064 ( 0 1 15) 0 0.6882 0.5587 11 14 ( 1087 1eaq_A) ( 169 1aoh_A) 0.4544 0.4544 6.0967 ( 0 3 10) 0 0.6360 0.6360 11 11 ( 1087 1eaq_A) ( 245 1ayo_A) 0.4541 0.4541 8.9924 ( 0 5 10) 0 0.6361 0.6361 11 11 ( 1087 1eaq_A) ( 374 1bg1_A) 0.4543 0.2778 7.6772 ( 0 9 10) 0 0.6900 0.4409 11 18 ( 1087 1eaq_A) ( 1008 1e2w_A) 0.3636 0.3999 6.0027 ( 0 1 6) 0 0.4545 0.4999 11 10 ( 1087 1eaq_A) ( 1040 1e5c_A) 0.4545 0.6246 5.7122 ( 0 5 10) 0 0.4545 0.6246 11 8 ( 1087 1eaq_A) ( 1087 1eaq_A) 1.0000 1.0000 0.0000 ( 0 47 55) 0 1.0000 1.0000 11 11 ( 1087 1eaq_A) ( 1300 1exh ) 0.4544 0.4998 6.5145 ( 0 9 10) 0 0.6363 0.6999 11 10 ( 1087 1eaq_A) ( 1351 1f0l_A) 0.5453 0.3750 5.5099 ( 0 11 15) 0 0.7245 0.4996 11 16 ( 1087 1eaq_A) ( 1689 1g1k_A) 0.4544 0.3846 6.1509 ( 0 2 10) 0 0.6358 0.5382 11 13 ( 1087 1eaq_A) ( 1760 1g87_A) 0.4539 0.4539 9.7303 ( 0 8 10) 0 0.4539 0.4539 11 11 ( 1087 1eaq_A) ( 2097 1h6f_A) 0.3633 0.2856 11.0181 ( 0 3 6) 0 0.3633 0.2856 11 14 ( 1087 1eaq_A) ( 2375 1i31_A) 0.4543 0.2941 7.7484 ( 0 4 10) 0 0.6351 0.4116 11 17 ( 1087 1eaq_A) ( 2769 1j8r_A) 0.3635 0.2857 8.1646 ( 0 3 6) 0 0.5439 0.4281 11 14 ( 1087 1eaq_A) ( 3343 1klf_B) 0.3636 0.3077 6.2118 ( 0 5 6) 0 0.6344 0.5376 11 13 ( 1087 1eaq_A) ( 3344 1klf_B) 0.4230 0.5138 8.4738 ( 1 6 10) 0 0.5042 0.6244 11 8 ( 1087 1eaq_A) ( 3803 1m2o_A) 0.4361 0.4044 7.9019 ( 1 7 10) 0 0.4544 0.4166 11 12 ( 1087 1eaq_A) ( 3986 1mnn_A) 0.6321 0.3180 5.4290 ( 1 16 21) 0 0.6321 0.3180 11 22 ( 1087 1eaq_A) ( 4098 1n12_A) 0.4532 0.6184 11.6983 ( 0 7 10) 0 0.4542 0.6232 11 8 ( 1087 1eaq_A) ( 4141 1n67_A) 0.4545 0.4545 5.7456 ( 0 6 10) 0 0.6359 0.6359 11 11 ( 1087 1eaq_A) ( 4142 1n67_A) 0.4543 0.3845 7.5229 ( 0 7 10) 0 0.7238 0.6139 11 13 ( 1087 1eaq_A) ( 4187 1nbc_A) 0.3636 0.3636 4.2001 ( 0 4 6) 0 0.4543 0.4543 11 11 ( 1087 1eaq_A) ( 4232 1nfi_A) 0.5454 0.7495 4.8384 ( 0 12 15) 0 0.5454 0.7495 11 8 ( 1087 1eaq_A) ( 4570 1o9w_A) 0.7150 0.5306 7.7364 ( 1 15 28) 0 0.7150 0.5306 11 15 ( 1087 1eaq_A) ( 4910 1p5v_B) 0.4539 0.7083 9.6260 ( 0 7 10) 0 0.6357 0.9936 11 7 ( 1087 1eaq_A) ( 4922 1p7h_L) 0.7269 0.7269 4.7152 ( 0 21 28) 0 0.7269 0.7269 11 11 ( 1087 1eaq_A) ( 4976 1pd1_A) 0.6353 0.5827 7.1707 ( 0 12 21) 0 0.6353 0.5827 11 12 ( 1087 1eaq_A) ( 4985 1pdk_B) 0.3636 0.4443 7.2955 ( 0 2 6) 0 0.3636 0.4443 11 9 ( 1087 1eaq_A) ( 5278 1qba ) 0.4540 0.4540 9.3053 ( 0 7 10) 0 0.6363 0.6363 11 11 ( 1087 1eaq_A) ( 5520 1r17_A) 0.4545 0.4166 4.9488 ( 0 4 10) 0 0.8160 0.7486 11 12 ( 1087 1eaq_A) ( 5521 1r17_A) 0.4542 0.4542 8.1117 ( 0 5 10) 0 0.6361 0.6361 11 11 ( 1087 1eaq_A) ( 6068 1uol_A) 0.4544 0.3845 6.8103 ( 0 7 10) 0 0.6360 0.5383 11 13 ( 1087 1eaq_A) ( 6119 1uur_A) 0.6837 0.5230 3.5285 ( 2 20 28) 0 0.6837 0.5230 11 15 -------------------------------------------------------------------------------------------------------------------------