------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 1351 1f0l_A) ( 34 1a3q_A) 0.2500 0.3999 6.6377 ( 0 4 6) 0 0.2573 0.3999 16 10 ( 1351 1f0l_A) ( 159 1amx ) 0.7382 0.8347 5.0615 ( 2 30 66) 0 0.7382 0.8347 16 14 ( 1351 1f0l_A) ( 169 1aoh_A) 0.3749 0.5450 7.1603 ( 0 7 15) 0 0.4995 0.7244 16 11 ( 1351 1f0l_A) ( 245 1ayo_A) 0.5611 0.8093 4.1406 ( 1 18 36) 0 0.5611 0.8093 16 11 ( 1351 1f0l_A) ( 374 1bg1_A) 0.3124 0.2777 8.7142 ( 0 6 10) 0 0.6656 0.5986 16 18 ( 1351 1f0l_A) ( 1008 1e2w_A) 0.4374 0.6993 5.7975 ( 0 10 21) 0 0.4374 0.6993 16 10 ( 1351 1f0l_A) ( 1040 1e5c_A) 0.4719 0.6631 4.7390 ( 2 14 28) 0 0.4999 0.9965 16 8 ( 1351 1f0l_A) ( 1087 1eaq_A) 0.3750 0.5453 5.5099 ( 0 11 15) 0 0.4996 0.7245 16 11 ( 1351 1f0l_A) ( 1300 1exh ) 0.6247 0.9964 4.4530 ( 1 33 45) 0 0.6247 0.9964 16 10 ( 1351 1f0l_A) ( 1351 1f0l_A) 1.0000 1.0000 0.0000 ( 0 95 120) 0 1.0000 1.0000 16 16 ( 1351 1f0l_A) ( 1689 1g1k_A) 0.4999 0.6151 5.5317 ( 0 12 28) 0 0.5033 0.6151 16 13 ( 1351 1f0l_A) ( 1760 1g87_A) 0.3125 0.4544 6.8959 ( 0 5 10) 0 0.3750 0.5452 16 11 ( 1351 1f0l_A) ( 2097 1h6f_A) 0.2500 0.2857 8.3816 ( 0 3 6) 0 0.3569 0.3958 16 14 ( 1351 1f0l_A) ( 2375 1i31_A) 0.4008 0.3962 8.5130 ( 5 21 45) 0 0.4902 0.4842 16 17 ( 1351 1f0l_A) ( 2769 1j8r_A) 0.3124 0.3569 10.3061 ( 0 6 10) 0 0.4587 0.4825 16 14 ( 1351 1f0l_A) ( 3343 1klf_B) 0.3125 0.3846 4.8398 ( 0 7 10) 0 0.4888 0.5187 16 13 ( 1351 1f0l_A) ( 3344 1klf_B) 0.3125 0.6245 6.0258 ( 0 4 10) 0 0.4970 0.9219 16 8 ( 1351 1f0l_A) ( 3803 1m2o_A) 0.5605 0.7417 6.2827 ( 1 17 36) 0 0.5605 0.7417 16 12 ( 1351 1f0l_A) ( 3986 1mnn_A) 0.5930 0.4474 4.7444 ( 3 27 45) 0 0.5930 0.4474 16 22 ( 1351 1f0l_A) ( 4098 1n12_A) 0.3125 0.6234 8.1130 ( 0 8 10) 0 0.4604 0.8634 16 8 ( 1351 1f0l_A) ( 4141 1n67_A) 0.3749 0.5448 7.8433 ( 0 7 15) 0 0.5021 0.6339 16 11 ( 1351 1f0l_A) ( 4142 1n67_A) 0.3750 0.4615 3.8721 ( 0 12 15) 0 0.6821 0.8313 16 13 ( 1351 1f0l_A) ( 4187 1nbc_A) 0.6871 0.9975 5.0799 ( 0 43 55) 0 0.6871 0.9975 16 11 ( 1351 1f0l_A) ( 4232 1nfi_A) 0.2500 0.4998 6.5840 ( 0 3 6) 0 0.4368 0.8534 16 8 ( 1351 1f0l_A) ( 4570 1o9w_A) 0.3124 0.3333 8.1480 ( 0 6 10) 0 0.4583 0.4661 16 15 ( 1351 1f0l_A) ( 4910 1p5v_B) 0.3125 0.7132 6.2009 ( 0 5 10) 0 0.4374 0.9912 16 7 ( 1351 1f0l_A) ( 4922 1p7h_L) 0.3731 0.5336 7.2569 ( 1 10 15) 0 0.3731 0.5336 16 11 ( 1351 1f0l_A) ( 4976 1pd1_A) 0.3093 0.4038 11.4900 ( 1 7 10) 0 0.3749 0.4995 16 12 ( 1351 1f0l_A) ( 4985 1pdk_B) 0.3750 0.6663 5.2095 ( 0 4 15) 0 0.3750 0.6663 16 9 ( 1351 1f0l_A) ( 5278 1qba ) 0.4994 0.7236 5.0607 ( 1 20 28) 0 0.4999 0.7269 16 11 ( 1351 1f0l_A) ( 5520 1r17_A) 0.4372 0.5821 8.4107 ( 0 8 21) 0 0.4454 0.5821 16 12 ( 1351 1f0l_A) ( 5521 1r17_A) 0.6246 0.9063 5.8515 ( 0 26 45) 0 0.6246 0.9063 16 11 ( 1351 1f0l_A) ( 6068 1uol_A) 0.3125 0.3846 5.0175 ( 0 7 10) 0 0.5030 0.6150 16 13 ( 1351 1f0l_A) ( 6119 1uur_A) 0.3094 0.3291 8.1634 ( 1 7 10) 0 0.4367 0.4655 16 15 -------------------------------------------------------------------------------------------------------------------------