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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

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( 1995 1gxc_A)  (  887 1dmz_A)     0.7000   0.7778   1.4290 (   0    8   21)   0     0.7000   0.7778   10   9
( 1995 1gxc_A)  ( 1741 1g6g_A)     0.7000   0.7777   2.9304 (   0    6   21)   0     0.7000   0.7777   10   9
( 1995 1gxc_A)  ( 1995 1gxc_A)     1.0000   1.0000   0.0000 (   0   29   45)   0     1.0000   1.0000   10  10
( 1995 1gxc_A)  ( 3625 1lgp_A)     0.5000   0.7143   2.5891 (   0    3   10)   0     0.5000   0.7143   10   7
( 1995 1gxc_A)  ( 3947 1mjs_A)     0.8999   0.5625   2.1924 (   0   17   36)   0     0.8999   0.5625   10  16
( 1995 1gxc_A)  ( 4084 1mzk_A)     0.7000   0.9998   2.7594 (   0    6   21)   0     0.7000   0.9999   10   7
( 1995 1gxc_A)  ( 5481 1qwt_A)     0.8996   0.5294   3.6748 (   0   17   36)   0     0.8996   0.5294   10  17
( 1995 1gxc_A)  ( 5527 1r21_A)     0.5999   0.8568   3.8298 (   0    5   15)   0     0.5999   0.8568   10   7
( 1995 1gxc_A)  ( 6022 1uht_A)     0.7000   0.9999   2.1564 (   0    8   21)   0     0.7000   0.9999   10   7
( 1995 1gxc_A)  ( 6040 1ujx_A)     0.6000   0.9994   3.5914 (   0    6   15)   0     0.6000   0.9994   10   6

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