-------------------------------------------------------------------------------------------------------------------------
Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:
HELIX min length: 5 STRAND min length: 3
shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100
anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12
Legend:
( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2
-------------------------------------------------------------------------------------------------------------------------
( 2631 1ivw_A) ( 554 1cb8_A) 0.2762 0.2795 6.6851 ( 26 73 120) 1 0.3987 0.4159 29 21
( 2631 1ivw_A) ( 1197 1ekm_A) 0.7586 0.6666 1.4178 ( 3 182 231) 0 0.7586 0.6666 29 33
( 2631 1ivw_A) ( 2084 1h54_A) 0.1724 0.2381 5.9889 ( 0 6 10) 0 0.3786 0.5205 29 21
( 2631 1ivw_A) ( 2243 1hn0_A) 0.2903 0.2933 6.7807 ( 26 77 120) 0 0.5111 0.6098 29 24
( 2631 1ivw_A) ( 2631 1ivw_A) 1.0000 1.0000 0.0000 ( 0 330 406) 0 1.0000 1.0000 29 29
( 2631 1ivw_A) ( 2689 1j0m_A) 0.2576 0.2602 6.7462 ( 28 73 120) 0 0.5840 0.9216 29 18
( 2631 1ivw_A) ( 2976 1jmm_A) 0.2069 0.2857 9.0087 ( 0 9 15) 0 0.3331 0.3417 29 21
( 2631 1ivw_A) ( 3006 1jov_A) 0.1963 0.1987 7.6078 ( 11 22 55) 1 0.3792 0.4997 29 22
( 2631 1ivw_A) ( 3102 1jz7_A) 0.5848 0.7671 6.1179 ( 4 80 136) 0 0.5848 0.7671 29 22
( 2631 1ivw_A) ( 3133 1k1x_A) 0.2902 0.2952 9.2904 ( 26 77 120) 1 0.5253 0.7099 29 18
( 2631 1ivw_A) ( 3420 1ksi_A) 0.6551 0.6551 2.4770 ( 2 128 171) 0 0.8124 0.8124 29 29
( 2631 1ivw_A) ( 3612 1lf6_A) 0.2069 0.3000 6.2328 ( 0 7 15) 0 0.5853 0.8440 29 20
( 2631 1ivw_A) ( 3741 1lur_A) 0.2414 0.3333 4.9108 ( 0 16 21) 0 0.5014 0.6475 29 21
( 2631 1ivw_A) ( 4153 1n7o_A) 0.2851 0.2883 7.1242 ( 28 81 136) 0 0.4481 0.6492 29 20
( 2631 1ivw_A) ( 4176 1n9e_A) 0.5862 0.5667 2.1195 ( 1 96 136) 0 0.6509 0.6435 29 30
( 2631 1ivw_A) ( 4380 1nsz_A) 0.2414 0.3181 7.3424 ( 0 14 21) 0 0.4394 0.4752 29 22
( 2631 1ivw_A) ( 4577 1oac_A) 0.6896 0.6451 2.5206 ( 1 151 190) 0 0.6896 0.6451 29 31
( 2631 1ivw_A) ( 5479 1qwn_A) 0.2092 0.2072 9.4594 ( 27 57 91) 2 0.4743 0.4435 29 35
( 2631 1ivw_A) ( 5711 1rwh_A) 0.2089 0.2096 7.7023 ( 41 86 136) 0 0.4841 0.5491 29 18
( 2631 1ivw_A) ( 5831 1snz_A) 0.2414 0.2800 7.0364 ( 0 12 21) 0 0.5155 0.5964 29 25
( 2631 1ivw_A) ( 6011 1ug9_A) 0.2411 0.2424 6.1882 ( 35 85 136) 1 0.4788 0.6763 29 20
-------------------------------------------------------------------------------------------------------------------------