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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

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( 4541 1o7n_A)  ( 1607 1fqt_A)     0.6923   0.9999   2.0468 (   0   30   36)   0     0.6923   0.9999   13   9
( 4541 1o7n_A)  ( 1768 1g8k_B)     0.7691   0.9087   3.5485 (   0   35   45)   0     0.7691   0.9087   13  11
( 4541 1o7n_A)  ( 2966 1jm1_A)     0.7691   0.5882   3.1734 (   0   39   45)   0     0.7691   0.5882   13  17
( 4541 1o7n_A)  ( 4440 1nyk_A)     0.7691   0.8331   3.5233 (   0   37   45)   0     0.7691   0.8331   13  12
( 4541 1o7n_A)  ( 4541 1o7n_A)     1.0000   1.0000   0.0000 (   0   67   78)   0     1.0000   1.0000   13  13
( 4541 1o7n_A)  ( 5622 1rfs  )     0.6154   0.8888   2.2751 (   0   21   28)   0     0.6154   0.8888   13   9
( 4541 1o7n_A)  ( 5644 1rie  )     0.6923   0.9000   1.9379 (   0   25   36)   0     0.7674   0.9932   13  10

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