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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

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( 2193 1het_A)  ( 1435 1f8f_A)     0.8459   0.8459   1.5115 (   1   45   55)   0     0.8459   0.8459   13  13
( 2193 1het_A)  ( 1707 1g31_A)     0.3077   0.5706   7.7852 (   0    5    6)   0     0.3455   0.5706   13   7
( 2193 1het_A)  ( 1955 1gu7_A)     0.8242   0.8847   1.8171 (   3   44   55)   0     0.8242   0.8847   13  12
( 2193 1het_A)  ( 2045 1h2b_A)     0.8199   0.8199   3.1477 (   3   42   55)   0     0.8199   0.8199   13  13
( 2193 1het_A)  ( 2193 1het_A)     1.0000   1.0000   0.0000 (   0   68   78)   0     1.0000   1.0000   13  13
( 2193 1het_A)  ( 2673 1iz0_A)     0.4439   0.4523   3.0609 (   7   32   45)   0     0.4439   0.4523   13  10
( 2193 1het_A)  ( 3016 1jqb_A)     0.5922   0.6074   3.6380 (   5   33   45)   0     0.5922   0.6074   13  12
( 2193 1het_A)  ( 3071 1jvb_A)     0.8456   0.8456   3.0801 (   1   41   55)   0     0.8456   0.8456   13  13
( 2193 1het_A)  ( 3384 1kol_A)     0.7592   0.7592   3.2842 (   2   32   45)   0     0.7592   0.7592   13  13
( 2193 1het_A)  ( 4548 1o89_A)     0.7592   0.9647   3.2961 (   2   32   45)   0     0.7592   0.9647   13  10
( 2193 1het_A)  ( 4881 1p3h_A)     0.3077   0.5713   5.0970 (   0    3    6)   0     0.4172   0.5713   13   7
( 2193 1het_A)  ( 5044 1pl7_A)     0.7000   0.7245   3.2989 (   5   41   55)   0     0.7000   0.7245   13  12
( 2193 1het_A)  ( 5405 1qor_A)     0.8460   0.9998   2.8196 (   0   44   55)   0     0.8460   0.9998   13  11
( 2193 1het_A)  ( 6113 1uuf_A)     0.7688   0.8327   2.1141 (   1   36   45)   0     0.7688   0.8327   13  12
( 2193 1het_A)  ( 6273 1vj0_A)     0.8461   0.8461   2.5505 (   0   41   55)   0     0.8461   0.8461   13  13
( 2193 1het_A)  ( 6275 1vj1_A)     0.7250   0.7546   2.3802 (   5   44   55)   0     0.7250   0.7546   13  12

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