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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

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( 4618 1oew_A)  (  908 1dpj_A)     0.8801   0.8551   3.2317 (  20  315  378)   0     0.8801   0.8551   31  32
( 4618 1oew_A)  ( 1541 1fkn_A)     0.8088   0.8318   4.4501 (  20  268  325)   0     0.8088   0.8318   31  30
( 4618 1oew_A)  ( 1559 1fmb  )     0.2258   0.7703   5.3019 (   1   18   21)   0     0.2258   0.7703   31   9
( 4618 1oew_A)  ( 2272 1hrn_A)     0.8442   0.8688   3.1485 (  20  289  351)   0     0.8442   0.8688   31  30
( 4618 1oew_A)  ( 2751 1j71_A)     0.9179   0.8658   2.5336 (  19  336  406)   0     0.9179   0.8658   31  33
( 4618 1oew_A)  ( 3611 1lf2_A)     0.8769   0.9295   2.8434 (  21  319  378)   0     0.8769   0.9295   31  29
( 4618 1oew_A)  ( 4005 1mpp  )     0.9383   0.8406   2.4447 (  23  370  435)   0     0.9383   0.8406   31  35
( 4618 1oew_A)  ( 4246 1nh0_A)     0.2244   0.5441   4.2575 (   3   17   21)   0     0.2443   0.6981   31   8
( 4618 1oew_A)  ( 4378 1nso_A)     0.1900   0.3636   4.6148 (   3   11   15)   0     0.1900   0.5714   31   7
( 4618 1oew_A)  ( 4618 1oew_A)     1.0000   1.0000   0.0000 (   0  408  465)   0     1.0000   1.0000   31  31
( 4618 1oew_A)  ( 6394 2apr  )     0.9305   0.9305   2.3790 (  14  344  406)   0     0.9305   0.9305   31  31
( 4618 1oew_A)  ( 6525 2rsp_A)     0.3074   0.4632   4.7050 (   8   38   45)   0     0.3785   0.6632   31  12
( 4618 1oew_A)  ( 6610 4fiv  )     0.2579   0.9059   3.6743 (   2   24   28)   0     0.2579   0.9059   31   8

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