-------------------------------------------------------------------------------------------------------------------------

Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

-------------------------------------------------------------------------------------------------------------------------
( 2000 1gxr_A)  (   15 1a12_A)     0.2581   0.2581   4.7458 (   0   17   28)   0     0.8382   0.8382   31  31
( 2000 1gxr_A)  ( 1250 1erj_A)     0.9032   0.9333   1.7276 (   0  274  378)   0     0.9675   0.9997   31  30
( 2000 1gxr_A)  ( 1643 1fwx_A)     0.2258   0.1892   3.9734 (   0   10   21)   0     0.9027   0.7565   31  37
( 2000 1gxr_A)  ( 2000 1gxr_A)     1.0000   1.0000   0.0000 (   0  363  465)   0     1.0000   1.0000   31  31
( 2000 1gxr_A)  ( 2988 1jmx_B)     0.3226   0.3333   4.3081 (   0   31   45)   0     0.8701   0.8990   31  30
( 2000 1gxr_A)  ( 3002 1jof_A)     0.3871   0.4138   3.0112 (   0   43   66)   0     0.9030   0.9652   31  29
( 2000 1gxr_A)  ( 3055 1jtd_B)     0.2581   0.3809   3.6142 (   0    6   28)   0     0.6774   0.9998   31  21
( 2000 1gxr_A)  ( 3148 1k32_A)     0.8384   0.8663   3.8637 (   1  194  325)   0     0.8384   0.8663   31  30
( 2000 1gxr_A)  ( 3158 1k3i_A)     0.9026   0.9647   3.9907 (   0  277  378)   0     0.9026   0.9647   31  29
( 2000 1gxr_A)  ( 3211 1k8k_C)     0.8706   0.8706   3.7824 (   0  248  351)   0     0.9031   0.9031   31  31
( 2000 1gxr_A)  ( 3506 1l0q_A)     0.8387   0.9285   2.1103 (   0  229  325)   0     0.9031   0.9997   31  28
( 2000 1gxr_A)  ( 3790 1m1x_A)     0.8386   0.8124   3.0851 (   0  220  325)   0     0.8386   0.8124   31  32
( 2000 1gxr_A)  ( 3908 1mda_H)     0.4193   0.4193   3.9812 (   0   51   78)   0     0.8703   0.8703   31  31
( 2000 1gxr_A)  ( 4223 1nex_B)     0.6129   0.5937   2.8598 (   0  111  171)   0     0.6129   0.5937   31  32
( 2000 1gxr_A)  ( 4359 1nr0_A)     0.8064   0.9614   2.3787 (   0  199  300)   0     0.8386   0.9998   31  26
( 2000 1gxr_A)  ( 4360 1nr0_A)     0.8386   0.9284   2.9064 (   0  216  325)   0     0.8387   0.9285   31  28
( 2000 1gxr_A)  ( 4706 1olz_A)     0.2581   0.2353   3.3454 (   0   16   28)   0     0.7747   0.7284   31  34
( 2000 1gxr_A)  ( 4869 1p22_A)     0.8709   0.9642   2.4265 (   0  246  351)   0     0.8709   0.9642   31  28
( 2000 1gxr_A)  ( 4969 1pby_B)     0.2581   0.2759   3.1100 (   0   20   28)   0     0.8705   0.9303   31  29
( 2000 1gxr_A)  ( 5009 1pgu_A)     0.8708   0.9641   2.9142 (   0  238  351)   0     0.9031   0.9997   31  28
( 2000 1gxr_A)  ( 5010 1pgu_A)     0.8709   0.9641   2.6711 (   0  231  351)   0     0.8709   0.9641   31  28
( 2000 1gxr_A)  ( 5314 1qfm_A)     0.2581   0.2424   4.4765 (   0   15   28)   0     0.9020   0.8476   31  33
( 2000 1gxr_A)  ( 5640 1ri6_A)     0.4839   0.5357   3.0664 (   0   73  105)   0     0.8709   0.9641   31  28
( 2000 1gxr_A)  ( 5888 1tbg_A)     0.9031   0.9332   2.4350 (   0  272  378)   0     0.9032   0.9333   31  30
( 2000 1gxr_A)  ( 6107 1utc_A)     0.8698   0.9294   4.9462 (   0  242  351)   0     0.8698   0.9294   31  29
( 2000 1gxr_A)  ( 6399 2bbk_H)     0.3548   0.3793   2.9295 (   0   31   55)   0     0.8703   0.9301   31  29

-------------------------------------------------------------------------------------------------------------------------