-------------------------------------------------------------------------------------------------------------------------

Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

-------------------------------------------------------------------------------------------------------------------------
( 1839 1gjw_A)  (  335 1bag  )     0.5705   0.5705   7.9795 (   0    1    6)   0     0.5705   0.5705    7   7
( 1839 1gjw_A)  (  367 1bf2  )     0.8406   0.6633   3.6097 (   1   10   21)   0     0.8406   0.6633    7  10
( 1839 1gjw_A)  ( 1028 1e43_A)     0.5713   0.4444   4.3312 (   0    2    6)   0     0.8535   0.6656    7   9
( 1839 1gjw_A)  ( 1729 1g5a_A)     0.5714   0.5714   3.9868 (   0    3    6)   0     0.5714   0.5714    7   7
( 1839 1gjw_A)  ( 1839 1gjw_A)     1.0000   1.0000   0.0000 (   0   14   21)   0     1.0000   1.0000    7   7
( 1839 1gjw_A)  ( 2063 1h3g_A)     0.8571   0.6666   2.6017 (   0    9   15)   0     0.8571   0.6666    7   9
( 1839 1gjw_A)  ( 2232 1hl9_A)     0.7139   0.5554   4.7906 (   0    4   10)   0     0.7139   0.5554    7   9
( 1839 1gjw_A)  ( 2311 1hx0_A)     0.8568   0.7498   3.6942 (   0    7   15)   0     0.8568   0.7498    7   8
( 1839 1gjw_A)  ( 2622 1iv8_A)     0.7376   0.6797   3.0017 (   1    9   15)   0     0.7376   0.6797    7   8
( 1839 1gjw_A)  ( 2687 1j0h_A)     0.5819   0.5707   4.3367 (   2   12   21)   0     0.7128   0.6242    7   8
( 1839 1gjw_A)  ( 2879 1ji1_A)     0.7140   0.5555   4.5502 (   0    4   10)   0     0.7140   0.5555    7   9
( 1839 1gjw_A)  ( 2882 1ji2_A)     0.5701   0.4993   8.7418 (   0    1    6)   0     0.5713   0.5000    7   8
( 1839 1gjw_A)  ( 3426 1ktb_A)     0.2945   0.2909  10.6389 (   1    3    6)   0     0.9804   0.8648    7   8
( 1839 1gjw_A)  ( 3839 1m53_A)     0.7143   0.7143   1.4164 (   0    4   10)   0     0.7143   0.7143    7   7
( 1839 1gjw_A)  ( 3878 1m7x_A)     0.0999   0.0999   5.3881 (   2    2    6)   0     0.0999   0.0999    7   7
( 1839 1gjw_A)  ( 4072 1mxg_A)     0.5714   0.5714   4.0108 (   0    1    6)   0     0.7111   0.7111    7   7
( 1839 1gjw_A)  ( 4335 1nof_A)     0.7141   0.5000   3.9792 (   0    4   10)   0     0.7141   0.5000    7  10
( 1839 1gjw_A)  ( 4646 1ogs_A)     0.7142   0.4167   3.6700 (   0    4   10)   0     0.9988   0.5833    7  12
( 1839 1gjw_A)  ( 5341 1qho_A)     0.7142   0.6249   3.7147 (   0    4   10)   0     0.7142   0.6249    7   8
( 1839 1gjw_A)  ( 5472 1qw9_A)     0.7139   0.4545   4.7408 (   0    4   10)   0     0.7139   0.4545    7  11
( 1839 1gjw_A)  ( 5546 1r46_A)     0.7138   0.5554   5.0710 (   0    4   10)   0     0.8551   0.6661    7   9
( 1839 1gjw_A)  ( 5953 1uas_A)     0.8567   0.7498   3.9741 (   0    9   15)   0     0.9034   0.8204    7   8
( 1839 1gjw_A)  ( 6023 1uhv_A)     0.9977   0.6361   4.9393 (   0    8   21)   0     0.9977   0.6361    7  11
( 1839 1gjw_A)  ( 6067 1uok  )     0.7143   0.7143   1.9872 (   0    4   10)   0     0.7143   0.7143    7   7
( 1839 1gjw_A)  ( 6644 7taa  )     0.8568   0.6666   3.8006 (   0    9   15)   0     0.8568   0.6666    7   9

-------------------------------------------------------------------------------------------------------------------------