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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

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( 2063 1h3g_A)  (  335 1bag  )     0.7776   0.9994   3.4841 (   0   13   21)   0     0.7776   0.9994    9   7
( 2063 1h3g_A)  (  367 1bf2  )     0.8760   0.7923   2.6755 (   1   18   28)   0     0.8760   0.7923    9  10
( 2063 1h3g_A)  ( 1028 1e43_A)     0.7775   0.7775   3.8978 (   0   14   21)   0     0.7775   0.7775    9   9
( 2063 1h3g_A)  ( 1729 1g5a_A)     0.7643   0.9559   2.0309 (   1   15   21)   0     0.7643   0.9559    9   7
( 2063 1h3g_A)  ( 1839 1gjw_A)     0.6666   0.8571   2.6017 (   0    9   15)   0     0.6666   0.8571    9   7
( 2063 1h3g_A)  ( 2063 1h3g_A)     1.0000   1.0000   0.0000 (   0   28   36)   0     1.0000   1.0000    9   9
( 2063 1h3g_A)  ( 2232 1hl9_A)     0.7777   0.7777   3.1725 (   0   16   21)   0     0.7777   0.7777    9   9
( 2063 1h3g_A)  ( 2311 1hx0_A)     0.8886   0.9994   3.4837 (   0   16   28)   0     0.8886   0.9994    9   8
( 2063 1h3g_A)  ( 2622 1iv8_A)     0.8804   0.9849   2.0918 (   1   20   28)   0     0.8804   0.9849    9   8
( 2063 1h3g_A)  ( 2687 1j0h_A)     0.8888   0.9999   2.4159 (   0   20   28)   0     0.8888   0.9999    9   8
( 2063 1h3g_A)  ( 2879 1ji1_A)     0.9932   0.9932   3.3584 (   1   25   36)   0     0.9932   0.9932    9   9
( 2063 1h3g_A)  ( 2882 1ji2_A)     0.8887   0.9996   3.1364 (   0   22   28)   0     0.8887   0.9996    9   8
( 2063 1h3g_A)  ( 3426 1ktb_A)     0.7520   0.7933   3.0628 (   2   18   28)   0     0.7520   0.7933    9   8
( 2063 1h3g_A)  ( 3839 1m53_A)     0.7778   0.9999   1.7907 (   0   13   21)   0     0.7778   0.9999    9   7
( 2063 1h3g_A)  ( 3878 1m7x_A)     0.7777   0.9998   2.7843 (   0   13   21)   0     0.7777   0.9998    9   7
( 2063 1h3g_A)  ( 4072 1mxg_A)     0.6666   0.8570   2.8030 (   0   10   15)   0     0.6666   0.8570    9   7
( 2063 1h3g_A)  ( 4335 1nof_A)     0.8885   0.7998   3.7060 (   0   17   28)   0     0.8885   0.7998    9  10
( 2063 1h3g_A)  ( 4646 1ogs_A)     0.4444   0.3333   6.0893 (   0    1    6)   0     0.8883   0.6665    9  12
( 2063 1h3g_A)  ( 5341 1qho_A)     0.7467   0.8221   3.0155 (   1   12   21)   0     0.8590   0.9486    9   8
( 2063 1h3g_A)  ( 5472 1qw9_A)     0.7777   0.6363   2.9435 (   0   11   21)   0     0.7777   0.6363    9  11
( 2063 1h3g_A)  ( 5546 1r46_A)     0.8799   0.8799   4.0551 (   1   20   28)   0     0.8799   0.8799    9   9
( 2063 1h3g_A)  ( 5953 1uas_A)     0.8884   0.9991   3.9081 (   0   20   28)   0     0.8884   0.9991    9   8
( 2063 1h3g_A)  ( 6023 1uhv_A)     0.8880   0.7269   4.5421 (   0   11   28)   0     0.8880   0.7269    9  11
( 2063 1h3g_A)  ( 6067 1uok  )     0.7778   0.9999   2.0684 (   0   10   21)   0     0.7778   0.9999    9   7
( 2063 1h3g_A)  ( 6644 7taa  )     0.8887   0.8887   3.1485 (   0   23   28)   0     0.8887   0.8887    9   9

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