------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 2311 1hx0_A) ( 335 1bag ) 0.8750 0.9999 1.7406 ( 0 11 21) 0 0.8750 0.9999 8 7 ( 2311 1hx0_A) ( 367 1bf2 ) 0.9557 0.7845 2.9683 ( 1 15 28) 0 0.9557 0.7845 8 10 ( 2311 1hx0_A) ( 1028 1e43_A) 0.8750 0.7778 1.8984 ( 0 10 21) 0 0.8750 0.7778 8 9 ( 2311 1hx0_A) ( 1729 1g5a_A) 0.8222 0.9062 2.3754 ( 1 12 21) 0 0.8745 0.9990 8 7 ( 2311 1hx0_A) ( 1839 1gjw_A) 0.7498 0.8568 3.6942 ( 0 7 15) 0 0.7498 0.8568 8 7 ( 2311 1hx0_A) ( 2063 1h3g_A) 0.9994 0.8886 3.4837 ( 0 16 28) 0 0.9994 0.8886 8 9 ( 2311 1hx0_A) ( 2232 1hl9_A) 0.9989 0.8883 4.1675 ( 0 16 28) 0 0.9989 0.8883 8 9 ( 2311 1hx0_A) ( 2311 1hx0_A) 1.0000 1.0000 0.0000 ( 0 17 28) 0 1.0000 1.0000 8 8 ( 2311 1hx0_A) ( 2622 1iv8_A) 0.9557 0.9557 2.8120 ( 1 15 28) 0 0.9986 0.9986 8 8 ( 2311 1hx0_A) ( 2687 1j0h_A) 0.9991 0.9991 3.8696 ( 0 15 28) 0 0.9991 0.9991 8 8 ( 2311 1hx0_A) ( 2879 1ji1_A) 0.9999 0.8888 2.3150 ( 0 15 28) 0 0.9999 0.8888 8 9 ( 2311 1hx0_A) ( 2882 1ji2_A) 0.9998 0.9998 2.5049 ( 0 16 28) 0 0.9998 0.9998 8 8 ( 2311 1hx0_A) ( 3426 1ktb_A) 0.8748 0.8748 2.9754 ( 0 9 21) 0 0.8748 0.8748 8 8 ( 2311 1hx0_A) ( 3839 1m53_A) 0.8745 0.9990 4.0232 ( 0 9 21) 0 0.8745 0.9990 8 7 ( 2311 1hx0_A) ( 3878 1m7x_A) 0.8747 0.9993 3.6387 ( 0 8 21) 0 0.8747 0.9993 8 7 ( 2311 1hx0_A) ( 4072 1mxg_A) 0.7500 0.8571 1.8440 ( 0 8 15) 0 0.7500 0.8571 8 7 ( 2311 1hx0_A) ( 4335 1nof_A) 0.8747 0.6999 3.6375 ( 0 9 21) 0 0.8747 0.6999 8 10 ( 2311 1hx0_A) ( 4646 1ogs_A) 0.7497 0.5000 4.4146 ( 0 4 15) 0 0.9992 0.6666 8 12 ( 2311 1hx0_A) ( 5341 1qho_A) 0.6632 0.6632 3.8427 ( 2 14 28) 0 0.9975 0.9975 8 8 ( 2311 1hx0_A) ( 5472 1qw9_A) 0.7495 0.5454 4.8165 ( 0 4 15) 0 0.8727 0.6651 8 11 ( 2311 1hx0_A) ( 5546 1r46_A) 0.9435 0.8558 3.3302 ( 1 14 28) 0 0.9955 0.8864 8 9 ( 2311 1hx0_A) ( 5953 1uas_A) 0.9998 0.9998 2.7629 ( 0 15 28) 0 0.9998 0.9998 8 8 ( 2311 1hx0_A) ( 6023 1uhv_A) 0.6246 0.4545 5.6909 ( 0 2 10) 0 0.8743 0.6362 8 11 ( 2311 1hx0_A) ( 6067 1uok ) 0.8745 0.9990 4.0075 ( 0 8 21) 0 0.8745 0.9990 8 7 ( 2311 1hx0_A) ( 6644 7taa ) 0.9999 0.8888 2.1820 ( 0 16 28) 0 0.9999 0.8888 8 9 -------------------------------------------------------------------------------------------------------------------------