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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

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( 3878 1m7x_A)  (  335 1bag  )     0.7138   0.7138   5.0641 (   0    5   10)   0     0.7138   0.7138    7   7
( 3878 1m7x_A)  (  367 1bf2  )     0.9998   0.7000   2.6050 (   0    9   21)   0     0.9998   0.7000    7  10
( 3878 1m7x_A)  ( 1028 1e43_A)     0.9990   0.7775   4.0058 (   0   12   21)   0     0.9990   0.7775    7   9
( 3878 1m7x_A)  ( 1729 1g5a_A)     0.8571   0.8571   2.3368 (   0    7   15)   0     0.8571   0.8571    7   7
( 3878 1m7x_A)  ( 1839 1gjw_A)     0.0999   0.0999   5.3881 (   2    2    6)   0     0.0999   0.0999    7   7
( 3878 1m7x_A)  ( 2063 1h3g_A)     0.9998   0.7777   2.7843 (   0   13   21)   0     0.9998   0.7777    7   9
( 3878 1m7x_A)  ( 2232 1hl9_A)     0.9993   0.7776   3.7225 (   0   13   21)   0     0.9993   0.7776    7   9
( 3878 1m7x_A)  ( 2311 1hx0_A)     0.9993   0.8747   3.6387 (   0    8   21)   0     0.9993   0.8747    7   8
( 3878 1m7x_A)  ( 2622 1iv8_A)     0.9997   0.8749   2.8910 (   0   11   21)   0     0.9997   0.8749    7   8
( 3878 1m7x_A)  ( 2687 1j0h_A)     0.9998   0.8749   2.6174 (   0   12   21)   0     0.9998   0.8749    7   8
( 3878 1m7x_A)  ( 2879 1ji1_A)     0.9998   0.7777   2.6741 (   0   11   21)   0     0.9998   0.7777    7   9
( 3878 1m7x_A)  ( 2882 1ji2_A)     0.9997   0.8748   2.9750 (   0   12   21)   0     0.9997   0.8748    7   8
( 3878 1m7x_A)  ( 3426 1ktb_A)     0.9999   0.8749   2.4853 (   0   12   21)   0     0.9999   0.8749    7   8
( 3878 1m7x_A)  ( 3839 1m53_A)     0.9998   0.9998   2.7097 (   0   11   21)   0     0.9998   0.9998    7   7
( 3878 1m7x_A)  ( 3878 1m7x_A)     1.0000   1.0000   0.0000 (   0   13   21)   0     1.0000   1.0000    7   7
( 3878 1m7x_A)  ( 4072 1mxg_A)     0.7131   0.7131   6.3410 (   0    5   10)   0     0.8560   0.8560    7   7
( 3878 1m7x_A)  ( 4335 1nof_A)     0.9988   0.6998   4.1906 (   0   10   21)   0     0.9988   0.6998    7  10
( 3878 1m7x_A)  ( 4646 1ogs_A)     0.5712   0.3333   5.5124 (   0    2    6)   0     0.9991   0.5833    7  12
( 3878 1m7x_A)  ( 5341 1qho_A)     0.9996   0.8748   3.1068 (   0   10   21)   0     0.9996   0.8748    7   8
( 3878 1m7x_A)  ( 5472 1qw9_A)     0.9988   0.6362   4.2505 (   0    9   21)   0     0.9988   0.6362    7  11
( 3878 1m7x_A)  ( 5546 1r46_A)     0.9992   0.7775   3.8416 (   0   12   21)   0     0.9992   0.7775    7   9
( 3878 1m7x_A)  ( 5953 1uas_A)     0.9997   0.8749   2.9243 (   0   11   21)   0     0.9997   0.8749    7   8
( 3878 1m7x_A)  ( 6023 1uhv_A)     0.9990   0.6363   4.0693 (   0    5   21)   0     0.9990   0.6363    7  11
( 3878 1m7x_A)  ( 6067 1uok  )     0.9998   0.9998   2.6902 (   0    8   21)   0     0.9998   0.9998    7   7
( 3878 1m7x_A)  ( 6644 7taa  )     0.9998   0.7777   2.5125 (   0   13   21)   0     0.9998   0.7777    7   9

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