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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

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( 5953 1uas_A)  (  335 1bag  )     0.8746   0.9992   3.7824 (   0   10   21)   0     0.8746   0.9992    8   7
( 5953 1uas_A)  (  367 1bf2  )     0.9771   0.7922   3.2572 (   1   18   28)   0     0.9771   0.7922    8  10
( 5953 1uas_A)  ( 1028 1e43_A)     0.8748   0.7777   3.0586 (   0   11   21)   0     0.8748   0.7777    8   9
( 5953 1uas_A)  ( 1729 1g5a_A)     0.8444   0.9437   2.6542 (   1   14   21)   0     0.8444   0.9437    8   7
( 5953 1uas_A)  ( 1839 1gjw_A)     0.7498   0.8567   3.9741 (   0    9   15)   0     0.8204   0.9034    8   7
( 5953 1uas_A)  ( 2063 1h3g_A)     0.9991   0.8884   3.9081 (   0   20   28)   0     0.9991   0.8884    8   9
( 5953 1uas_A)  ( 2232 1hl9_A)     0.9986   0.8881   4.3551 (   0   19   28)   0     0.9986   0.8881    8   9
( 5953 1uas_A)  ( 2311 1hx0_A)     0.9998   0.9998   2.7629 (   0   15   28)   0     0.9998   0.9998    8   8
( 5953 1uas_A)  ( 2622 1iv8_A)     0.9845   0.9845   3.3111 (   1   20   28)   0     0.9845   0.9845    8   8
( 5953 1uas_A)  ( 2687 1j0h_A)     0.9996   0.9996   3.2171 (   0   19   28)   0     0.9996   0.9996    8   8
( 5953 1uas_A)  ( 2879 1ji1_A)     0.9997   0.8887   2.8914 (   0   20   28)   0     0.9997   0.8887    8   9
( 5953 1uas_A)  ( 2882 1ji2_A)     0.9997   0.9997   3.0265 (   0   19   28)   0     0.9997   0.9997    8   8
( 5953 1uas_A)  ( 3426 1ktb_A)     0.8750   0.8750   1.8183 (   0   12   21)   0     0.8750   0.8750    8   8
( 5953 1uas_A)  ( 3839 1m53_A)     0.8745   0.9990   4.0412 (   0   13   21)   0     0.8745   0.9990    8   7
( 5953 1uas_A)  ( 3878 1m7x_A)     0.8749   0.9997   2.9243 (   0   11   21)   0     0.8749   0.9997    8   7
( 5953 1uas_A)  ( 4072 1mxg_A)     0.7500   0.8571   2.5989 (   0    7   15)   0     0.7500   0.8571    8   7
( 5953 1uas_A)  ( 4335 1nof_A)     0.9989   0.7996   4.1410 (   0   16   28)   0     0.9989   0.7996    8  10
( 5953 1uas_A)  ( 4646 1ogs_A)     0.6248   0.4166   4.6236 (   0    3   10)   0     0.9992   0.6666    8  12
( 5953 1uas_A)  ( 5341 1qho_A)     0.9641   0.9641   4.2023 (   1   16   28)   0     0.9641   0.9641    8   8
( 5953 1uas_A)  ( 5472 1qw9_A)     0.9984   0.7270   4.5084 (   0   17   28)   0     0.9984   0.7270    8  11
( 5953 1uas_A)  ( 5546 1r46_A)     0.9814   0.8784   3.1331 (   1   19   28)   0     0.9814   0.8784    8   9
( 5953 1uas_A)  ( 5953 1uas_A)     1.0000   1.0000   0.0000 (   0   20   28)   0     1.0000   1.0000    8   8
( 5953 1uas_A)  ( 6023 1uhv_A)     0.9992   0.7271   3.8273 (   0   11   28)   0     0.9992   0.7271    8  11
( 5953 1uas_A)  ( 6067 1uok  )     0.8746   0.9992   3.8563 (   0   10   21)   0     0.8746   0.9992    8   7
( 5953 1uas_A)  ( 6644 7taa  )     0.9999   0.8888   2.2801 (   0   20   28)   0     0.9999   0.8888    8   9

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