------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 2477 1ig0_A) ( 701 1cx4_A) 0.6473 0.5600 4.5358 ( 1 9 21) 0 0.6632 0.5675 10 12 ( 2477 1ig0_A) ( 702 1cx4_A) 0.3999 0.3333 7.4659 ( 0 4 6) 0 0.6633 0.5675 10 12 ( 2477 1ig0_A) ( 799 1dcs ) 0.4000 0.1739 5.3927 ( 0 1 6) 0 0.6632 0.3326 10 23 ( 2477 1ig0_A) ( 836 1dgw_A) 0.7998 0.5333 3.7288 ( 0 11 28) 0 0.7998 0.5333 10 15 ( 2477 1ig0_A) ( 930 1ds1_A) 0.4394 0.3327 4.5218 ( 2 9 28) 0 0.7085 0.3612 10 22 ( 2477 1ig0_A) ( 1045 1e5s_A) 0.7085 0.4887 4.0325 ( 1 9 28) 0 0.7085 0.4887 10 16 ( 2477 1ig0_A) ( 1230 1ep0_A) 0.7997 0.5333 3.9741 ( 0 11 28) 0 0.7999 0.5333 10 15 ( 2477 1ig0_A) ( 1312 1eyb_A) 0.7999 0.2759 3.2349 ( 0 11 28) 0 0.7999 0.2759 10 29 ( 2477 1ig0_A) ( 1505 1fi2_A) 0.7999 0.5714 3.2970 ( 0 10 28) 0 0.7999 0.5714 10 14 ( 2477 1ig0_A) ( 1624 1ft9_A) 0.7995 0.7270 4.4639 ( 0 13 28) 0 0.7995 0.7270 10 11 ( 2477 1ig0_A) ( 1894 1gp6_A) 0.3999 0.1818 6.1809 ( 0 2 6) 0 0.5992 0.3930 10 22 ( 2477 1ig0_A) ( 1946 1gtf_A) 0.4999 0.7135 5.7990 ( 0 0 10) 0 0.6999 0.9996 10 7 ( 2477 1ig0_A) ( 2049 1h2k_A) 0.7338 0.3192 4.7369 ( 1 10 28) 0 0.7566 0.3577 10 25 ( 2477 1ig0_A) ( 2409 1i5z_A) 0.6998 0.6998 4.2394 ( 0 9 21) 0 0.6998 0.6998 10 10 ( 2477 1ig0_A) ( 2477 1ig0_A) 1.0000 1.0000 0.0000 ( 0 29 45) 0 1.0000 1.0000 10 10 ( 2477 1ig0_A) ( 2479 1ig3_A) 0.7999 0.9997 2.9222 ( 0 9 28) 0 0.7999 0.9997 10 8 ( 2477 1ig0_A) ( 2699 1j1l_A) 0.7999 0.3200 2.6370 ( 0 11 28) 0 0.7999 0.3200 10 25 ( 2477 1ig0_A) ( 2735 1j58_A) 0.7998 0.2857 3.3598 ( 0 11 28) 0 0.7998 0.2857 10 28 ( 2477 1ig0_A) ( 3004 1jop_A) 0.4999 0.4166 5.3544 ( 0 5 10) 0 0.7997 0.6665 10 12 ( 2477 1ig0_A) ( 3032 1jr7_A) 0.4000 0.1739 5.6775 ( 0 3 6) 0 0.5229 0.3352 10 23 ( 2477 1ig0_A) ( 3066 1juh_A) 0.6999 0.2692 3.6721 ( 0 8 21) 0 0.7518 0.3190 10 26 ( 2477 1ig0_A) ( 3708 1lrh_A) 0.7998 0.6153 3.5859 ( 0 11 28) 0 0.7998 0.6153 10 13 ( 2477 1ig0_A) ( 3833 1m4o_A) 0.4529 0.3953 7.9231 ( 1 6 10) 0 0.4529 0.3953 10 12 ( 2477 1ig0_A) ( 4207 1ne6_A) 0.3999 0.3077 7.3756 ( 0 4 6) 0 0.3999 0.3077 10 13 ( 2477 1ig0_A) ( 4421 1nx4_A) 0.4000 0.2105 3.4901 ( 0 2 6) 0 0.6235 0.4083 10 19 ( 2477 1ig0_A) ( 4429 1nxm_A) 0.7562 0.5428 5.0421 ( 2 18 36) 0 0.7998 0.5428 10 16 ( 2477 1ig0_A) ( 4484 1o4t_A) 0.6727 0.6385 2.8390 ( 1 8 28) 0 0.7987 0.7264 10 11 ( 2477 1ig0_A) ( 4501 1o5l_A) 0.6998 0.6362 4.1578 ( 0 9 21) 0 0.6998 0.6362 10 11 ( 2477 1ig0_A) ( 4503 1o5u_A) 0.4000 0.4000 2.7815 ( 0 2 6) 0 0.7645 0.7645 10 10 ( 2477 1ig0_A) ( 4536 1o7f_A) 0.5000 0.3846 3.3484 ( 0 5 10) 0 0.6633 0.5277 10 13 ( 2477 1ig0_A) ( 4538 1o7f_A) 0.6474 0.6018 3.3974 ( 1 9 21) 0 0.6633 0.6126 10 11 ( 2477 1ig0_A) ( 4600 1od5_A) 0.7999 0.5000 2.9630 ( 0 11 28) 0 0.7999 0.5000 10 16 ( 2477 1ig0_A) ( 4601 1od5_A) 0.7999 0.5000 2.9861 ( 0 11 28) 0 0.7999 0.5000 10 16 ( 2477 1ig0_A) ( 4606 1odm_A) 0.7644 0.3988 4.2764 ( 1 12 28) 0 0.7644 0.3988 10 20 ( 2477 1ig0_A) ( 4631 1ofn_A) 0.7998 0.4706 3.3437 ( 0 11 28) 0 0.8873 0.5285 10 17 ( 2477 1ig0_A) ( 4671 1oih_A) 0.6237 0.3309 3.9656 ( 1 8 21) 0 0.6237 0.3475 10 21 ( 2477 1ig0_A) ( 4713 1omi_A) 0.5000 0.5000 3.3547 ( 0 4 10) 0 0.6999 0.6999 10 10 ( 2477 1ig0_A) ( 4782 1otj_A) 0.6998 0.3333 3.9673 ( 0 8 21) 0 0.6998 0.3333 10 21 ( 2477 1ig0_A) ( 5002 1pg6_A) 0.5000 0.2273 4.3345 ( 0 5 10) 0 0.7997 0.3636 10 22 ( 2477 1ig0_A) ( 5054 1pmi ) 0.7999 0.2286 2.9379 ( 0 11 28) 0 0.8879 0.2571 10 35 ( 2477 1ig0_A) ( 5193 1q3e_A) 0.4000 0.2500 5.6401 ( 0 4 6) 0 0.6633 0.4336 10 16 ( 2477 1ig0_A) ( 5480 1qwr_A) 0.4999 0.1786 4.7555 ( 0 4 10) 0 0.7998 0.2857 10 28 ( 2477 1ig0_A) ( 5489 1qxr_A) 0.6999 0.5000 3.5514 ( 0 8 21) 0 0.8807 0.6391 10 14 ( 2477 1ig0_A) ( 5604 1rc6_A) 0.7999 0.3809 3.0236 ( 0 11 28) 0 0.7999 0.3809 10 21 ( 2477 1ig0_A) ( 5840 1sq4_A) 0.7998 0.4210 3.7006 ( 0 9 28) 0 0.7998 0.4210 10 19 ( 2477 1ig0_A) ( 5856 1su4_A) 0.5000 0.8331 3.5251 ( 0 4 10) 0 0.5000 0.8331 10 6 ( 2477 1ig0_A) ( 6277 1vj2_A) 0.4000 0.3636 3.4883 ( 0 3 6) 0 0.7340 0.6836 10 11 ( 2477 1ig0_A) ( 6395 2arc_A) 0.7341 0.5951 3.4410 ( 1 10 28) 0 0.7645 0.6051 10 13 -------------------------------------------------------------------------------------------------------------------------