------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 4722 1on3_A) ( 794 1dci_A) 0.6625 0.5801 4.1367 ( 4 45 78) 0 0.6625 0.5801 19 22 ( 4722 1on3_A) ( 1132 1ef8_A) 0.6684 0.6093 3.3112 ( 4 49 78) 0 0.6790 0.6158 19 21 ( 4722 1on3_A) ( 1311 1ey3_A) 0.6684 0.5590 3.4062 ( 4 49 78) 0 0.6684 0.5590 19 23 ( 4722 1on3_A) ( 1463 1fc6_A) 0.4161 0.4161 3.6543 ( 1 9 28) 0 0.5253 0.5253 19 19 ( 4722 1on3_A) ( 2251 1hnu_A) 0.5818 0.6041 4.1223 ( 4 32 66) 0 0.5818 0.6041 19 18 ( 4722 1on3_A) ( 2344 1hzd_A) 0.6829 0.5413 3.1901 ( 2 47 78) 0 0.6829 0.5413 19 24 ( 4722 1on3_A) ( 2761 1j7x_A) 0.4210 0.4000 4.0314 ( 0 13 28) 0 0.5522 0.5289 19 20 ( 4722 1on3_A) ( 3149 1k32_A) 0.4650 0.5146 4.6481 ( 1 9 36) 0 0.4734 0.5289 19 17 ( 4722 1on3_A) ( 4459 1nzy_A) 0.6221 0.6221 3.6092 ( 3 38 66) 0 0.6221 0.6221 19 19 ( 4722 1on3_A) ( 4554 1o8u_A) 0.5787 0.6466 3.8845 ( 1 29 55) 0 0.5787 0.6466 19 17 ( 4722 1on3_A) ( 4722 1on3_A) 1.0000 1.0000 0.0000 ( 0 134 171) 0 1.0000 1.0000 19 19 ( 4722 1on3_A) ( 4723 1on3_A) 0.7892 0.8330 3.6399 ( 1 66 105) 0 0.7892 0.8330 19 18 ( 4722 1on3_A) ( 5023 1pix_A) 0.8128 0.4313 2.9293 ( 6 81 120) 0 0.8128 0.4313 19 37 ( 4722 1on3_A) ( 5210 1q52_A) 0.7338 0.6349 3.5893 ( 3 62 91) 0 0.7338 0.6349 19 22 ( 4722 1on3_A) ( 5939 1tyf_A) 0.4732 0.6407 2.9621 ( 1 19 36) 0 0.4732 0.6407 19 14 ( 4722 1on3_A) ( 6030 1uiy_A) 0.6296 0.5985 3.6828 ( 2 38 66) 0 0.6296 0.5985 19 20 ( 4722 1on3_A) ( 6144 1uyr_A) 0.8395 0.6946 3.4227 ( 3 77 120) 0 0.8395 0.6946 19 23 ( 4722 1on3_A) ( 6145 1uyr_A) 0.7817 0.5542 3.7336 ( 4 71 105) 0 0.7835 0.5810 19 27 -------------------------------------------------------------------------------------------------------------------------