------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 3144 1k2w_A) ( 42 1a4i_A) 0.2941 0.4999 5.1581 ( 0 4 10) 0 0.4706 0.7998 17 10 ( 3144 1k2w_A) ( 265 1b16_A) 0.8805 0.9349 2.8461 ( 2 59 105) 0 0.8805 0.9349 17 16 ( 3144 1k2w_A) ( 312 1b7g_O) 0.5882 0.7690 3.7748 ( 0 19 45) 0 0.6464 0.8437 17 13 ( 3144 1k2w_A) ( 319 1b8p_A) 0.6468 0.9978 4.9233 ( 0 28 55) 0 0.6468 0.9978 17 11 ( 3144 1k2w_A) ( 352 1bdb ) 0.9401 0.8881 2.8809 ( 2 76 120) 0 0.9401 0.8881 17 18 ( 3144 1k2w_A) ( 377 1bg6 ) 0.5283 0.4992 5.2237 ( 1 18 36) 0 0.5881 0.5554 17 18 ( 3144 1k2w_A) ( 506 1c1d_A) 0.3529 0.4998 6.3948 ( 0 2 15) 0 0.5291 0.7484 17 12 ( 3144 1k2w_A) ( 707 1cyd_A) 0.9990 0.9437 2.7436 ( 2 85 136) 0 0.9990 0.9437 17 18 ( 3144 1k2w_A) ( 781 1db3_A) 0.7647 0.5909 2.6463 ( 0 43 78) 0 0.8224 0.6360 17 22 ( 3144 1k2w_A) ( 847 1dih ) 0.4118 0.9989 4.1023 ( 0 2 21) 0 0.4118 0.9991 17 7 ( 3144 1k2w_A) ( 873 1dlj_A) 0.4116 0.4373 7.9235 ( 0 10 21) 0 0.5290 0.5619 17 16 ( 3144 1k2w_A) ( 906 1dpg_A) 0.7057 0.9222 4.2688 ( 0 35 66) 0 0.7057 0.9222 17 13 ( 3144 1k2w_A) ( 972 1dxy ) 0.3529 0.3750 4.1644 ( 0 7 15) 0 0.7040 0.7474 17 16 ( 3144 1k2w_A) ( 1053 1e6u_A) 0.7033 0.5447 3.5269 ( 2 41 66) 0 0.7033 0.5447 17 22 ( 3144 1k2w_A) ( 1071 1e7w_A) 0.9411 0.9411 1.8245 ( 1 75 120) 0 0.9411 0.9411 17 17 ( 3144 1k2w_A) ( 1094 1ebf_A) 0.3528 0.4994 8.4065 ( 0 2 15) 0 0.5173 0.6238 17 12 ( 3144 1k2w_A) ( 1117 1edz_A) 0.3529 0.5000 3.7210 ( 0 2 15) 0 0.5191 0.6984 17 12 ( 3144 1k2w_A) ( 1189 1ek6_A) 0.8206 0.6355 4.0111 ( 2 49 91) 0 0.8206 0.6355 17 22 ( 3144 1k2w_A) ( 1219 1enp ) 0.9410 0.8888 2.7283 ( 0 82 120) 0 0.9410 0.8888 17 18 ( 3144 1k2w_A) ( 1221 1eny ) 0.9060 0.9060 3.1280 ( 5 74 120) 0 0.9060 0.9060 17 17 ( 3144 1k2w_A) ( 1242 1eq2_A) 0.8211 0.6357 4.7119 ( 2 54 91) 0 0.8211 0.6613 17 22 ( 3144 1k2w_A) ( 1355 1f14_A) 0.3529 0.4000 5.8539 ( 0 3 15) 0 0.5320 0.5591 17 15 ( 3144 1k2w_A) ( 1436 1f8f_A) 0.4706 0.5714 2.9157 ( 0 9 28) 0 0.7040 0.8522 17 14 ( 3144 1k2w_A) ( 1487 1ff9_A) 0.7643 0.8659 4.4949 ( 0 41 78) 0 0.7643 0.8659 17 15 ( 3144 1k2w_A) ( 1531 1fjh_A) 0.7059 0.7500 2.5103 ( 0 36 66) 0 0.7628 0.8099 17 16 ( 3144 1k2w_A) ( 1560 1fmc_A) 0.9953 0.9953 2.9984 ( 3 82 136) 0 0.9953 0.9953 17 17 ( 3144 1k2w_A) ( 1804 1gdh_A) 0.3529 0.4286 4.3111 ( 0 8 15) 0 0.7048 0.8542 17 14 ( 3144 1k2w_A) ( 1807 1gee_A) 0.9763 0.8392 2.8439 ( 5 89 136) 0 0.9763 0.8392 17 20 ( 3144 1k2w_A) ( 1809 1geg_A) 0.9886 0.9886 1.7389 ( 4 86 136) 0 0.9886 0.9886 17 17 ( 3144 1k2w_A) ( 1899 1gpj_A) 0.3529 0.5000 2.4278 ( 0 6 15) 0 0.6468 0.9154 17 12 ( 3144 1k2w_A) ( 1922 1gr0_A) 0.6456 0.7818 5.0586 ( 1 22 55) 0 0.6456 0.7818 17 14 ( 3144 1k2w_A) ( 1948 1gtm_A) 0.3529 0.3750 5.4143 ( 0 5 15) 0 0.6730 0.7068 17 16 ( 3144 1k2w_A) ( 1956 1gu7_A) 0.3529 0.3529 4.6129 ( 0 6 15) 0 0.7005 0.7005 17 17 ( 3144 1k2w_A) ( 2004 1gy8_A) 0.7643 0.5651 4.4057 ( 0 45 78) 0 0.7643 0.5651 17 23 ( 3144 1k2w_A) ( 2016 1gz3_A) 0.4117 0.4117 4.4201 ( 0 5 21) 0 0.6511 0.6511 17 17 ( 3144 1k2w_A) ( 2017 1gz6_A) 0.9335 0.7965 3.5613 ( 3 67 120) 0 0.9335 0.7965 17 20 ( 3144 1k2w_A) ( 2046 1h2b_A) 0.4704 0.5709 6.7575 ( 0 6 28) 0 0.7053 0.8556 17 14 ( 3144 1k2w_A) ( 2090 1h5q_A) 0.9878 0.8445 2.9538 ( 4 85 136) 0 0.9878 0.8445 17 20 ( 3144 1k2w_A) ( 2095 1h6d_A) 0.6468 0.7852 4.7075 ( 0 23 55) 0 0.6495 0.7852 17 14 ( 3144 1k2w_A) ( 2180 1hdc_A) 0.9355 0.9355 3.0536 ( 3 72 120) 0 0.9355 0.9355 17 17 ( 3144 1k2w_A) ( 2189 1hdo_A) 0.7058 0.7999 2.6907 ( 0 35 66) 0 0.7058 0.7999 17 15 ( 3144 1k2w_A) ( 2194 1het_A) 0.4706 0.5333 2.6379 ( 0 10 28) 0 0.7053 0.7990 17 15 ( 3144 1k2w_A) ( 2270 1hrd_A) 0.4116 0.4373 7.6458 ( 0 4 21) 0 0.6231 0.6558 17 16 ( 3144 1k2w_A) ( 2309 1hwx_A) 0.2941 0.2941 2.6304 ( 0 2 10) 0 0.5880 0.5880 17 17 ( 3144 1k2w_A) ( 2316 1hxh_A) 0.9201 0.9719 2.8905 ( 4 68 120) 0 0.9201 0.9719 17 16 ( 3144 1k2w_A) ( 2328 1hye_A) 0.6467 0.9971 5.2450 ( 0 28 55) 0 0.6467 0.9971 17 11 ( 3144 1k2w_A) ( 2330 1hyh_A) 0.6462 0.9927 5.1809 ( 1 27 55) 0 0.6462 0.9927 17 11 ( 3144 1k2w_A) ( 2368 1i24_A) 0.7645 0.4815 3.7835 ( 0 44 78) 0 0.7828 0.5140 17 27 ( 3144 1k2w_A) ( 2376 1i36_A) 0.2941 0.3333 2.9292 ( 0 2 10) 0 0.4765 0.4914 17 15 ( 3144 1k2w_A) ( 2463 1id1_A) 0.6470 0.8459 3.5355 ( 0 27 55) 0 0.6470 0.8459 17 13 ( 3144 1k2w_A) ( 2615 1iuk_A) 0.4705 0.6664 4.7556 ( 0 9 28) 0 0.5856 0.8190 17 12 ( 3144 1k2w_A) ( 2657 1iy8_A) 0.9991 0.9991 2.3626 ( 2 84 136) 0 0.9991 0.9991 17 17 ( 3144 1k2w_A) ( 2674 1iz0_A) 0.4706 0.5333 3.0248 ( 0 9 28) 0 0.7054 0.7991 17 15 ( 3144 1k2w_A) ( 2725 1j3v_A) 0.4705 0.5712 5.4506 ( 0 9 28) 0 0.5879 0.7133 17 14 ( 3144 1k2w_A) ( 2736 1j5p_A) 0.5293 0.8990 4.6137 ( 0 11 36) 0 0.5294 0.8993 17 10 ( 3144 1k2w_A) ( 2781 1ja9_A) 0.9997 0.9997 2.9698 ( 0 92 136) 0 0.9997 0.9997 17 17 ( 3144 1k2w_A) ( 2789 1jax_A) 0.3529 0.3000 2.6241 ( 0 7 15) 0 0.5797 0.4962 17 20 ( 3144 1k2w_A) ( 3017 1jqb_A) 0.4706 0.5333 3.2639 ( 0 11 28) 0 0.6470 0.7332 17 15 ( 3144 1k2w_A) ( 3059 1jtv_A) 0.8626 0.8183 3.9990 ( 4 64 105) 0 0.8626 0.8183 17 18 ( 3144 1k2w_A) ( 3072 1jvb_A) 0.4118 0.5385 2.7127 ( 0 6 21) 0 0.6469 0.8454 17 13 ( 3144 1k2w_A) ( 3144 1k2w_A) 1.0000 1.0000 0.0000 ( 0 98 136) 0 1.0000 1.0000 17 17 ( 3144 1k2w_A) ( 3192 1k6j_A) 0.8232 0.5833 2.9992 ( 1 48 91) 0 0.8232 0.5833 17 24 ( 3144 1k2w_A) ( 3257 1kbz_A) 0.7057 0.6315 3.9239 ( 0 29 66) 0 0.7057 0.6315 17 19 ( 3144 1k2w_A) ( 3385 1kol_A) 0.4117 0.4374 6.7776 ( 0 12 21) 0 0.7055 0.7495 17 16 ( 3144 1k2w_A) ( 3414 1ks9_A) 0.3529 0.3529 5.2079 ( 0 9 15) 0 0.5393 0.5393 17 17 ( 3144 1k2w_A) ( 3481 1kyq_A) 0.4575 0.6727 3.1305 ( 1 8 28) 0 0.4706 0.7996 17 10 ( 3144 1k2w_A) ( 3561 1l7d_A) 0.4117 0.4666 5.2149 ( 0 5 21) 0 0.5880 0.6663 17 15 ( 3144 1k2w_A) ( 3593 1lc0_A) 0.5860 0.8210 4.7739 ( 1 17 45) 0 0.6464 0.9130 17 12 ( 3144 1k2w_A) ( 3606 1ldn_A) 0.6463 0.9122 4.9062 ( 1 27 55) 0 0.6463 0.9122 17 12 ( 3144 1k2w_A) ( 3610 1leh_A) 0.3529 0.4614 6.0529 ( 0 3 15) 0 0.5292 0.6914 17 13 ( 3144 1k2w_A) ( 3633 1li4_A) 0.3529 0.4615 5.5548 ( 0 1 15) 0 0.5844 0.7549 17 13 ( 3144 1k2w_A) ( 3637 1lj8_A) 0.6469 0.5499 4.6437 ( 0 28 55) 0 0.6469 0.5499 17 20 ( 3144 1k2w_A) ( 3677 1lnq_A) 0.6470 0.6110 3.8108 ( 0 27 55) 0 0.6470 0.6110 17 18 ( 3144 1k2w_A) ( 3722 1lss_A) 0.6470 0.9164 3.2708 ( 0 25 55) 0 0.6470 0.9164 17 12 ( 3144 1k2w_A) ( 3724 1lsu_A) 0.6470 0.9163 3.4190 ( 0 25 55) 0 0.6470 0.9163 17 12 ( 3144 1k2w_A) ( 3734 1lu9_A) 0.4118 0.5000 2.7557 ( 0 8 21) 0 0.6470 0.7855 17 14 ( 3144 1k2w_A) ( 3854 1m66_A) 0.3529 0.3750 5.5598 ( 0 10 15) 0 0.6210 0.6532 17 16 ( 3144 1k2w_A) ( 4047 1mv8_A) 0.4117 0.4117 5.4120 ( 0 5 21) 0 0.7008 0.7008 17 17 ( 3144 1k2w_A) ( 4067 1mx3_A) 0.4116 0.4997 7.1655 ( 0 10 21) 0 0.7055 0.8562 17 14 ( 3144 1k2w_A) ( 4131 1n5d_A) 0.8235 0.8235 2.1174 ( 0 49 91) 0 0.8810 0.8810 17 17 ( 3144 1k2w_A) ( 4341 1np3_A) 0.3529 0.3529 2.8344 ( 0 6 15) 0 0.5281 0.5281 17 17 ( 3144 1k2w_A) ( 4351 1npy_A) 0.4706 0.6153 3.9414 ( 0 12 28) 0 0.6956 0.8862 17 13 ( 3144 1k2w_A) ( 4404 1nvm_B) 0.5882 0.8330 3.8112 ( 0 18 45) 0 0.6465 0.9138 17 12 ( 3144 1k2w_A) ( 4409 1nvt_A) 0.4706 0.6666 3.8631 ( 0 13 28) 0 0.6462 0.9117 17 12 ( 3144 1k2w_A) ( 4417 1nwc_A) 0.5258 0.7886 4.0870 ( 1 13 36) 0 0.6468 0.9976 17 11 ( 3144 1k2w_A) ( 4430 1nxq_A) 0.9897 0.9367 3.0949 ( 4 89 136) 0 0.9897 0.9367 17 18 ( 3144 1k2w_A) ( 4447 1nyt_A) 0.4118 0.5384 2.8984 ( 0 10 21) 0 0.6470 0.8458 17 13 ( 3144 1k2w_A) ( 4499 1o5i_A) 0.9987 0.9987 3.1760 ( 2 81 136) 0 0.9987 0.9987 17 17 ( 3144 1k2w_A) ( 4520 1o6z_A) 0.6463 0.9934 5.1424 ( 1 28 55) 0 0.6463 0.9934 17 11 ( 3144 1k2w_A) ( 4549 1o89_A) 0.4118 0.5385 2.7536 ( 0 10 21) 0 0.6467 0.8448 17 13 ( 3144 1k2w_A) ( 4573 1oaa ) 0.8819 0.9369 3.0559 ( 1 49 105) 0 0.8819 0.9369 17 16 ( 3144 1k2w_A) ( 4585 1obb_A) 0.6676 0.8047 4.6996 ( 3 30 66) 0 0.6676 0.8440 17 13 ( 3144 1k2w_A) ( 4588 1obf_O) 0.5882 0.8330 3.9569 ( 0 25 45) 0 0.5882 0.8330 17 12 ( 3144 1k2w_A) ( 4668 1oi7_A) 0.5882 0.9991 3.9566 ( 0 21 45) 0 0.5882 0.9992 17 10 ( 3144 1k2w_A) ( 4730 1ono_A) 0.5848 0.8144 3.3282 ( 1 15 45) 0 0.6922 0.9316 17 12 ( 3144 1k2w_A) ( 4739 1ooe_A) 0.7616 0.9205 4.9351 ( 2 45 78) 0 0.7616 0.9205 17 14 ( 3144 1k2w_A) ( 4765 1orr_A) 0.8459 0.5722 3.5493 ( 4 54 105) 0 0.8459 0.5722 17 26 ( 3144 1k2w_A) ( 4863 1p1j_A) 0.5881 0.4000 5.0933 ( 0 22 45) 0 0.6455 0.4478 17 25 ( 3144 1k2w_A) ( 4943 1p9l_A) 0.6468 0.9980 4.7701 ( 0 25 55) 0 0.6469 0.9986 17 11 ( 3144 1k2w_A) ( 5029 1pjq_A) 0.4932 0.6474 3.3877 ( 2 14 36) 0 0.5245 0.8396 17 10 ( 3144 1k2w_A) ( 5045 1pl7_A) 0.4704 0.6145 7.1317 ( 0 8 28) 0 0.7053 0.9209 17 13 ( 3144 1k2w_A) ( 5082 1pqw_A) 0.4706 0.5000 2.8941 ( 0 8 28) 0 0.7056 0.7496 17 16 ( 3144 1k2w_A) ( 5097 1psd_A) 0.3529 0.5000 4.2098 ( 0 7 15) 0 0.6467 0.9146 17 12 ( 3144 1k2w_A) ( 5140 1px0_A) 0.8822 0.9373 3.0324 ( 0 65 105) 0 0.8822 0.9373 17 16 ( 3144 1k2w_A) ( 5227 1q7c_A) 0.9773 0.9272 2.8735 ( 5 90 136) 0 0.9773 0.9272 17 18 ( 3144 1k2w_A) ( 5362 1qki_A) 0.5882 0.8329 4.0918 ( 0 19 45) 0 0.6454 0.9072 17 12 ( 3144 1k2w_A) ( 5387 1qmg_A) 0.3529 0.3158 3.0443 ( 0 6 15) 0 0.5777 0.5202 17 19 ( 3144 1k2w_A) ( 5406 1qor_A) 0.6468 0.8451 5.0174 ( 0 27 55) 0 0.7053 0.9209 17 13 ( 3144 1k2w_A) ( 5409 1qp8_A) 0.3529 0.4615 4.8849 ( 0 5 15) 0 0.6945 0.8827 17 13 ( 3144 1k2w_A) ( 5444 1qsg_A) 0.9988 0.9436 3.3704 ( 2 87 136) 0 0.9988 0.9436 17 18 ( 3144 1k2w_A) ( 5493 1qyc_A) 0.8231 0.5833 3.7879 ( 1 50 91) 0 0.8231 0.5948 17 24 ( 3144 1k2w_A) ( 5571 1r6d_A) 0.8205 0.5828 3.4792 ( 2 48 91) 0 0.8205 0.5828 17 24 ( 3144 1k2w_A) ( 5654 1rjw_A) 0.4118 0.4667 2.7222 ( 0 6 21) 0 0.7045 0.7975 17 15 ( 3144 1k2w_A) ( 5665 1rkx_A) 0.7909 0.6547 3.8055 ( 4 51 91) 0 0.7909 0.6547 17 21 ( 3144 1k2w_A) ( 5786 1say_A) 0.4117 0.5830 5.9810 ( 0 7 21) 0 0.6465 0.9134 17 12 ( 3144 1k2w_A) ( 5838 1spx_A) 0.9411 0.9411 2.2698 ( 0 74 120) 0 0.9411 0.9411 17 17 ( 3144 1k2w_A) ( 5877 1t2d_A) 0.6462 0.9926 4.8165 ( 1 26 55) 0 0.6462 0.9926 17 11 ( 3144 1k2w_A) ( 5942 1u8x_X) 0.6944 0.9412 5.4943 ( 2 28 66) 0 0.6944 0.9412 17 12 ( 3144 1k2w_A) ( 5954 1uay_A) 0.8235 0.8750 1.6066 ( 0 55 91) 0 0.8813 0.9361 17 16 ( 3144 1k2w_A) ( 6085 1ur5_A) 0.6464 0.9129 4.6655 ( 1 28 55) 0 0.6464 0.9129 17 12 ( 3144 1k2w_A) ( 6114 1uuf_A) 0.4703 0.5707 7.5603 ( 0 10 28) 0 0.6989 0.8393 17 14 ( 3144 1k2w_A) ( 6257 1vi2_A) 0.4706 0.6153 3.7324 ( 0 11 28) 0 0.6466 0.8444 17 13 ( 3144 1k2w_A) ( 6274 1vj0_A) 0.4706 0.5000 2.8409 ( 0 10 28) 0 0.6708 0.7040 17 16 ( 3144 1k2w_A) ( 6276 1vj1_A) 0.4705 0.5711 6.0234 ( 0 8 28) 0 0.7055 0.8562 17 14 ( 3144 1k2w_A) ( 6292 1vjp_A) 0.6468 0.7851 4.8950 ( 0 27 55) 0 0.6837 0.8033 17 14 ( 3144 1k2w_A) ( 6341 1xcb_A) 0.4117 0.8743 4.3685 ( 0 8 21) 0 0.4118 0.8745 17 8 ( 3144 1k2w_A) ( 6388 2ae1 ) 0.9411 0.9411 1.6730 ( 1 74 120) 0 0.9411 0.9411 17 17 ( 3144 1k2w_A) ( 6420 2cmd ) 0.6463 0.9121 4.5414 ( 1 26 55) 0 0.6463 0.9121 17 12 ( 3144 1k2w_A) ( 6426 2dap ) 0.5881 0.9981 4.7434 ( 0 19 45) 0 0.5881 0.9982 17 10 ( 3144 1k2w_A) ( 6497 2nac_A) 0.3529 0.4615 4.5619 ( 0 6 15) 0 0.6452 0.8392 17 13 ( 3144 1k2w_A) ( 6505 2pgd ) 0.3529 0.4286 4.4061 ( 0 9 15) 0 0.5293 0.6425 17 14 ( 3144 1k2w_A) ( 6627 6ldh ) 0.7056 0.9220 4.5799 ( 0 29 66) 0 0.7056 0.9220 17 13 -------------------------------------------------------------------------------------------------------------------------