------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 873 1dlj_A) ( 42 1a4i_A) 0.3125 0.4999 5.3769 ( 0 2 10) 0 0.4980 0.7802 16 10 ( 873 1dlj_A) ( 265 1b16_A) 0.5199 0.5199 5.0567 ( 9 49 78) 0 0.7276 0.7276 16 16 ( 873 1dlj_A) ( 312 1b7g_O) 0.6869 0.8444 5.2515 ( 1 38 55) 0 0.6869 0.8444 16 13 ( 873 1dlj_A) ( 319 1b8p_A) 0.6871 0.9975 3.1878 ( 1 33 55) 0 0.6871 0.9975 16 11 ( 873 1dlj_A) ( 352 1bdb ) 0.3750 0.3333 4.0600 ( 0 9 15) 0 0.6867 0.6106 16 18 ( 873 1dlj_A) ( 377 1bg6 ) 0.8748 0.7777 3.0378 ( 0 71 91) 0 0.8748 0.7777 16 18 ( 873 1dlj_A) ( 506 1c1d_A) 0.3750 0.5000 4.5144 ( 0 7 15) 0 0.4997 0.6653 16 12 ( 873 1dlj_A) ( 707 1cyd_A) 0.4374 0.3888 6.4732 ( 0 8 21) 0 0.6808 0.6073 16 18 ( 873 1dlj_A) ( 781 1db3_A) 0.3750 0.2727 6.0801 ( 0 4 15) 0 0.6380 0.4885 16 22 ( 873 1dlj_A) ( 847 1dih ) 0.4282 0.7342 2.4640 ( 1 8 21) 0 0.4375 0.9995 16 7 ( 873 1dlj_A) ( 873 1dlj_A) 1.0000 1.0000 0.0000 ( 0 103 120) 0 1.0000 1.0000 16 16 ( 873 1dlj_A) ( 906 1dpg_A) 0.4336 0.5277 3.8336 ( 1 10 21) 0 0.6245 0.7678 16 13 ( 873 1dlj_A) ( 972 1dxy ) 0.3750 0.3750 3.2563 ( 0 8 15) 0 0.6244 0.6244 16 16 ( 873 1dlj_A) ( 1053 1e6u_A) 0.3750 0.2727 6.0958 ( 0 7 15) 0 0.6235 0.4542 16 22 ( 873 1dlj_A) ( 1071 1e7w_A) 0.6238 0.5873 5.0217 ( 1 22 45) 0 0.6497 0.6267 16 17 ( 873 1dlj_A) ( 1094 1ebf_A) 0.3619 0.4531 4.0603 ( 1 6 15) 0 0.4921 0.6358 16 12 ( 873 1dlj_A) ( 1117 1edz_A) 0.4175 0.5148 2.6167 ( 2 13 21) 0 0.5269 0.6664 16 12 ( 873 1dlj_A) ( 1189 1ek6_A) 0.3125 0.2273 2.8678 ( 0 2 10) 0 0.6792 0.5283 16 22 ( 873 1dlj_A) ( 1219 1enp ) 0.4375 0.3889 4.9823 ( 0 7 21) 0 0.6387 0.5822 16 18 ( 873 1dlj_A) ( 1221 1eny ) 0.4371 0.4115 8.9833 ( 0 9 21) 0 0.6863 0.6462 16 17 ( 873 1dlj_A) ( 1242 1eq2_A) 0.3795 0.3597 5.5585 ( 9 35 55) 0 0.6241 0.4544 16 22 ( 873 1dlj_A) ( 1355 1f14_A) 0.8910 0.9379 4.3500 ( 6 82 105) 0 0.8910 0.9379 16 15 ( 873 1dlj_A) ( 1436 1f8f_A) 0.6235 0.7114 2.7237 ( 1 20 45) 0 0.6866 0.7840 16 14 ( 873 1dlj_A) ( 1487 1ff9_A) 0.7975 0.8462 5.2977 ( 3 47 78) 0 0.7975 0.8462 16 15 ( 873 1dlj_A) ( 1531 1fjh_A) 0.3607 0.3607 5.3628 ( 7 26 45) 0 0.6168 0.6168 16 16 ( 873 1dlj_A) ( 1560 1fmc_A) 0.3750 0.3529 4.2369 ( 0 8 15) 0 0.6862 0.6461 16 17 ( 873 1dlj_A) ( 1804 1gdh_A) 0.4375 0.5000 2.6554 ( 0 12 21) 0 0.6869 0.7846 16 14 ( 873 1dlj_A) ( 1807 1gee_A) 0.3858 0.3791 5.3550 ( 11 43 78) 0 0.7416 0.5972 16 20 ( 873 1dlj_A) ( 1809 1geg_A) 0.4372 0.4116 8.0945 ( 0 9 21) 0 0.7204 0.6836 16 17 ( 873 1dlj_A) ( 1899 1gpj_A) 0.4375 0.5833 3.6451 ( 0 9 21) 0 0.6871 0.9150 16 12 ( 873 1dlj_A) ( 1922 1gr0_A) 0.3677 0.4147 2.4451 ( 1 7 15) 0 0.5623 0.6424 16 14 ( 873 1dlj_A) ( 1948 1gtm_A) 0.4375 0.4375 3.6628 ( 0 9 21) 0 0.5383 0.5383 16 16 ( 873 1dlj_A) ( 1956 1gu7_A) 0.5625 0.5294 2.8788 ( 0 19 36) 0 0.6249 0.5882 16 17 ( 873 1dlj_A) ( 2004 1gy8_A) 0.3750 0.2609 5.4771 ( 0 2 15) 0 0.5221 0.3837 16 23 ( 873 1dlj_A) ( 2016 1gz3_A) 0.3125 0.2941 3.8053 ( 0 5 10) 0 0.6757 0.6383 16 17 ( 873 1dlj_A) ( 2017 1gz6_A) 0.4373 0.3499 7.9001 ( 0 7 21) 0 0.6653 0.5672 16 20 ( 873 1dlj_A) ( 2046 1h2b_A) 0.6240 0.7123 2.6424 ( 1 22 45) 0 0.6249 0.7141 16 14 ( 873 1dlj_A) ( 2090 1h5q_A) 0.4374 0.3500 5.7960 ( 0 5 21) 0 0.7138 0.5873 16 20 ( 873 1dlj_A) ( 2095 1h6d_A) 0.3729 0.3779 3.4099 ( 7 27 45) 0 0.6154 0.6961 16 14 ( 873 1dlj_A) ( 2180 1hdc_A) 0.4373 0.4116 7.8969 ( 0 10 21) 0 0.6211 0.5853 16 17 ( 873 1dlj_A) ( 2189 1hdo_A) 0.4374 0.4666 5.4140 ( 0 7 21) 0 0.6865 0.7319 16 15 ( 873 1dlj_A) ( 2194 1het_A) 0.4375 0.4666 4.8643 ( 0 9 21) 0 0.7416 0.7885 16 15 ( 873 1dlj_A) ( 2270 1hrd_A) 0.3501 0.3501 4.8466 ( 2 10 15) 0 0.5622 0.5622 16 16 ( 873 1dlj_A) ( 2309 1hwx_A) 0.3750 0.3529 3.3896 ( 0 4 15) 0 0.4990 0.4698 16 17 ( 873 1dlj_A) ( 2316 1hxh_A) 0.3750 0.3750 4.0761 ( 0 9 15) 0 0.6245 0.6245 16 16 ( 873 1dlj_A) ( 2328 1hye_A) 0.6873 0.9984 3.5946 ( 1 40 55) 0 0.6873 0.9984 16 11 ( 873 1dlj_A) ( 2330 1hyh_A) 0.6875 0.9997 2.9952 ( 0 41 55) 0 0.6875 0.9997 16 11 ( 873 1dlj_A) ( 2368 1i24_A) 0.3750 0.2222 4.9125 ( 0 8 15) 0 0.6239 0.3703 16 27 ( 873 1dlj_A) ( 2376 1i36_A) 0.8749 0.9332 2.8165 ( 0 66 91) 0 0.8749 0.9332 16 15 ( 873 1dlj_A) ( 2463 1id1_A) 0.6824 0.8320 2.8165 ( 2 33 55) 0 0.6827 0.8328 16 13 ( 873 1dlj_A) ( 2615 1iuk_A) 0.5608 0.7429 3.4804 ( 1 17 36) 0 0.5744 0.7429 16 12 ( 873 1dlj_A) ( 2657 1iy8_A) 0.3750 0.3529 3.9527 ( 0 8 15) 0 0.6168 0.5822 16 17 ( 873 1dlj_A) ( 2674 1iz0_A) 0.4375 0.4667 3.5423 ( 0 11 21) 0 0.7136 0.7513 16 15 ( 873 1dlj_A) ( 2725 1j3v_A) 0.8747 0.9995 3.1424 ( 1 67 91) 0 0.8747 0.9995 16 14 ( 873 1dlj_A) ( 2736 1j5p_A) 0.4747 0.5463 4.2064 ( 3 17 36) 0 0.5610 0.8848 16 10 ( 873 1dlj_A) ( 2781 1ja9_A) 0.6866 0.6464 4.6960 ( 1 28 55) 0 0.6866 0.6464 16 17 ( 873 1dlj_A) ( 2789 1jax_A) 0.8896 0.7331 3.1103 ( 6 81 105) 0 0.9268 0.7464 16 20 ( 873 1dlj_A) ( 3017 1jqb_A) 0.5625 0.6000 2.9271 ( 0 19 36) 0 0.6800 0.7230 16 15 ( 873 1dlj_A) ( 3059 1jtv_A) 0.5623 0.4999 5.6194 ( 0 20 36) 0 0.7489 0.6661 16 18 ( 873 1dlj_A) ( 3072 1jvb_A) 0.4375 0.5385 2.8391 ( 0 11 21) 0 0.6242 0.7670 16 13 ( 873 1dlj_A) ( 3144 1k2w_A) 0.4373 0.4116 7.9235 ( 0 10 21) 0 0.5619 0.5290 16 17 ( 873 1dlj_A) ( 3192 1k6j_A) 0.3125 0.2083 3.6438 ( 0 3 10) 0 0.6867 0.4808 16 24 ( 873 1dlj_A) ( 3257 1kbz_A) 0.3125 0.2632 4.2383 ( 0 2 10) 0 0.6868 0.5787 16 19 ( 873 1dlj_A) ( 3385 1kol_A) 0.4999 0.4999 4.8966 ( 0 13 28) 0 0.6659 0.6659 16 16 ( 873 1dlj_A) ( 3414 1ks9_A) 0.8068 0.7605 3.7725 ( 3 60 78) 0 0.8068 0.7605 16 17 ( 873 1dlj_A) ( 3481 1kyq_A) 0.4925 0.7341 3.5941 ( 1 10 28) 0 0.5325 0.7341 16 10 ( 873 1dlj_A) ( 3561 1l7d_A) 0.4375 0.4667 3.3379 ( 0 11 21) 0 0.6598 0.6961 16 15 ( 873 1dlj_A) ( 3593 1lc0_A) 0.3925 0.4103 3.8222 ( 5 21 36) 0 0.6862 0.9111 16 12 ( 873 1dlj_A) ( 3606 1ldn_A) 0.6873 0.9157 2.8567 ( 1 38 55) 0 0.6873 0.9157 16 12 ( 873 1dlj_A) ( 3610 1leh_A) 0.3750 0.4615 4.5487 ( 0 7 15) 0 0.5462 0.6500 16 13 ( 873 1dlj_A) ( 3633 1li4_A) 0.3750 0.4615 2.8100 ( 0 7 15) 0 0.4531 0.5108 16 13 ( 873 1dlj_A) ( 3637 1lj8_A) 0.6863 0.5496 6.5962 ( 1 42 55) 0 0.7490 0.5997 16 20 ( 873 1dlj_A) ( 3677 1lnq_A) 0.6829 0.6086 3.2245 ( 2 34 55) 0 0.6829 0.6086 16 18 ( 873 1dlj_A) ( 3722 1lss_A) 0.6810 0.8905 2.6957 ( 2 31 55) 0 0.6810 0.8905 16 12 ( 873 1dlj_A) ( 3724 1lsu_A) 0.6156 0.7966 2.4338 ( 2 25 45) 0 0.6156 0.7966 16 12 ( 873 1dlj_A) ( 3734 1lu9_A) 0.4375 0.5000 3.7137 ( 0 14 21) 0 0.7844 0.8767 16 14 ( 873 1dlj_A) ( 3854 1m66_A) 0.9364 0.9364 3.4294 ( 2 81 105) 0 0.9364 0.9364 16 16 ( 873 1dlj_A) ( 4047 1mv8_A) 0.9999 0.9411 2.2694 ( 1 94 120) 0 0.9999 0.9411 16 17 ( 873 1dlj_A) ( 4067 1mx3_A) 0.4375 0.5000 3.0395 ( 0 12 21) 0 0.6808 0.7728 16 14 ( 873 1dlj_A) ( 4131 1n5d_A) 0.3588 0.3575 4.5206 ( 11 40 66) 0 0.6867 0.6464 16 17 ( 873 1dlj_A) ( 4341 1np3_A) 0.9114 0.8628 3.4019 ( 5 80 105) 0 0.9255 0.8734 16 17 ( 873 1dlj_A) ( 4351 1npy_A) 0.4356 0.5331 4.0536 ( 1 12 21) 0 0.6813 0.8292 16 13 ( 873 1dlj_A) ( 4404 1nvm_B) 0.6241 0.8297 4.5848 ( 1 24 45) 0 0.6241 0.8297 16 12 ( 873 1dlj_A) ( 4409 1nvt_A) 0.4375 0.5833 2.8733 ( 0 11 21) 0 0.6245 0.8314 16 12 ( 873 1dlj_A) ( 4417 1nwc_A) 0.4365 0.6297 2.7539 ( 1 14 21) 0 0.6186 0.8709 16 11 ( 873 1dlj_A) ( 4430 1nxq_A) 0.3749 0.3333 6.7452 ( 0 9 15) 0 0.6242 0.5551 16 18 ( 873 1dlj_A) ( 4447 1nyt_A) 0.5000 0.6154 3.0692 ( 0 16 28) 0 0.7460 0.9119 16 13 ( 873 1dlj_A) ( 4499 1o5i_A) 0.4023 0.4000 5.2391 ( 9 37 66) 0 0.6324 0.6046 16 17 ( 873 1dlj_A) ( 4520 1o6z_A) 0.6874 0.9996 3.2042 ( 0 40 55) 0 0.6874 0.9996 16 11 ( 873 1dlj_A) ( 4549 1o89_A) 0.5623 0.6919 5.1744 ( 0 21 36) 0 0.6870 0.8447 16 13 ( 873 1dlj_A) ( 4573 1oaa ) 0.3750 0.3750 4.0940 ( 0 6 15) 0 0.6468 0.6468 16 16 ( 873 1dlj_A) ( 4585 1obb_A) 0.6872 0.8453 2.9467 ( 1 35 55) 0 0.6872 0.8453 16 13 ( 873 1dlj_A) ( 4588 1obf_O) 0.4077 0.4214 4.0436 ( 7 30 45) 0 0.6562 0.8315 16 12 ( 873 1dlj_A) ( 4668 1oi7_A) 0.6003 0.8262 2.7240 ( 3 29 45) 0 0.6248 0.9979 16 10 ( 873 1dlj_A) ( 4730 1ono_A) 0.6234 0.8265 4.5782 ( 1 20 45) 0 0.6243 0.8306 16 12 ( 873 1dlj_A) ( 4739 1ooe_A) 0.3125 0.3571 5.5394 ( 0 7 10) 0 0.6863 0.7834 16 14 ( 873 1dlj_A) ( 4765 1orr_A) 0.3125 0.1923 4.6377 ( 0 6 10) 0 0.6241 0.3845 16 26 ( 873 1dlj_A) ( 4863 1p1j_A) 0.6672 0.4377 6.7404 ( 3 35 55) 0 0.6672 0.4377 16 25 ( 873 1dlj_A) ( 4943 1p9l_A) 0.3750 0.5453 5.1983 ( 0 6 15) 0 0.6388 0.8353 16 11 ( 873 1dlj_A) ( 5029 1pjq_A) 0.4984 0.5995 2.5455 ( 3 19 36) 0 0.4984 0.7520 16 10 ( 873 1dlj_A) ( 5045 1pl7_A) 0.5625 0.6923 2.5325 ( 0 20 36) 0 0.6868 0.8441 16 13 ( 873 1dlj_A) ( 5082 1pqw_A) 0.6874 0.6874 3.8091 ( 0 24 55) 0 0.6935 0.6935 16 16 ( 873 1dlj_A) ( 5097 1psd_A) 0.3750 0.5000 2.9322 ( 0 8 15) 0 0.6242 0.8302 16 12 ( 873 1dlj_A) ( 5140 1px0_A) 0.3125 0.3125 5.3072 ( 0 2 10) 0 0.6811 0.6811 16 16 ( 873 1dlj_A) ( 5227 1q7c_A) 0.4374 0.3888 6.5582 ( 0 8 21) 0 0.6444 0.5858 16 18 ( 873 1dlj_A) ( 5362 1qki_A) 0.4455 0.4676 4.0274 ( 5 24 45) 0 0.6679 0.7686 16 12 ( 873 1dlj_A) ( 5387 1qmg_A) 0.9251 0.7841 4.2486 ( 4 79 105) 0 0.9251 0.7841 16 19 ( 873 1dlj_A) ( 5406 1qor_A) 0.3125 0.3846 4.0112 ( 0 4 10) 0 0.7495 0.9217 16 13 ( 873 1dlj_A) ( 5409 1qp8_A) 0.4356 0.5331 3.2244 ( 1 12 21) 0 0.5986 0.7031 16 13 ( 873 1dlj_A) ( 5444 1qsg_A) 0.3750 0.3333 3.0106 ( 0 5 15) 0 0.5609 0.4991 16 18 ( 873 1dlj_A) ( 5493 1qyc_A) 0.3750 0.2500 5.1472 ( 0 2 15) 0 0.5492 0.4412 16 24 ( 873 1dlj_A) ( 5571 1r6d_A) 0.3518 0.3117 5.0318 ( 6 22 36) 0 0.6138 0.4151 16 24 ( 873 1dlj_A) ( 5654 1rjw_A) 0.4375 0.4667 2.5927 ( 0 11 21) 0 0.6809 0.7243 16 15 ( 873 1dlj_A) ( 5665 1rkx_A) 0.3747 0.2856 9.9600 ( 0 5 15) 0 0.6811 0.5221 16 21 ( 873 1dlj_A) ( 5786 1say_A) 0.3750 0.5000 2.9145 ( 0 8 15) 0 0.7495 0.9977 16 12 ( 873 1dlj_A) ( 5838 1spx_A) 0.7485 0.7048 5.3342 ( 1 30 66) 0 0.7485 0.7048 16 17 ( 873 1dlj_A) ( 5877 1t2d_A) 0.6874 0.9994 3.4790 ( 0 37 55) 0 0.6874 0.9994 16 11 ( 873 1dlj_A) ( 5942 1u8x_X) 0.6872 0.9154 3.4807 ( 1 37 55) 0 0.6872 0.9154 16 12 ( 873 1dlj_A) ( 5954 1uay_A) 0.6240 0.6240 4.5865 ( 1 23 45) 0 0.6240 0.6240 16 16 ( 873 1dlj_A) ( 6085 1ur5_A) 0.6875 0.9166 2.5415 ( 0 39 55) 0 0.6875 0.9166 16 12 ( 873 1dlj_A) ( 6114 1uuf_A) 0.4375 0.5000 2.7138 ( 0 12 21) 0 0.6871 0.7850 16 14 ( 873 1dlj_A) ( 6257 1vi2_A) 0.5000 0.6154 2.9142 ( 0 18 28) 0 0.6872 0.8453 16 13 ( 873 1dlj_A) ( 6274 1vj0_A) 0.4375 0.4375 4.9593 ( 0 9 21) 0 0.7448 0.7448 16 16 ( 873 1dlj_A) ( 6276 1vj1_A) 0.5000 0.5714 3.1682 ( 0 14 28) 0 0.6840 0.7789 16 14 ( 873 1dlj_A) ( 6292 1vjp_A) 0.4688 0.4765 7.3671 ( 9 44 66) 0 0.5908 0.6298 16 14 ( 873 1dlj_A) ( 6341 1xcb_A) 0.4375 0.8749 2.4448 ( 0 13 21) 0 0.4375 0.8749 16 8 ( 873 1dlj_A) ( 6388 2ae1 ) 0.4373 0.4116 7.8733 ( 0 8 21) 0 0.6862 0.6461 16 17 ( 873 1dlj_A) ( 6420 2cmd ) 0.6875 0.9166 2.0183 ( 0 39 55) 0 0.6875 0.9166 16 12 ( 873 1dlj_A) ( 6426 2dap ) 0.6180 0.9359 3.4556 ( 2 27 45) 0 0.6180 0.9359 16 10 ( 873 1dlj_A) ( 6497 2nac_A) 0.4374 0.5383 5.6204 ( 0 7 21) 0 0.6863 0.8427 16 13 ( 873 1dlj_A) ( 6505 2pgd ) 0.8042 0.9127 2.8160 ( 3 54 78) 0 0.8042 0.9127 16 14 ( 873 1dlj_A) ( 6627 6ldh ) 0.6872 0.8454 2.7380 ( 1 36 55) 0 0.6872 0.8454 16 13 -------------------------------------------------------------------------------------------------------------------------