------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 1042 1e5d_A) ( 6 1a04_A) 0.8180 0.7803 4.3436 ( 2 19 45) 0 0.8993 0.8177 10 11 ( 1042 1e5d_A) ( 26 1a2o_A) 0.8599 0.8599 4.4602 ( 2 21 45) 0 0.8945 0.8945 10 10 ( 1042 1e5d_A) ( 90 1a9x_B) 0.8994 0.5000 4.1006 ( 0 16 36) 0 0.8994 0.5000 10 18 ( 1042 1e5d_A) ( 256 1b00_A) 0.8175 0.8175 5.1816 ( 2 19 45) 0 0.8994 0.8994 10 10 ( 1042 1e5d_A) ( 266 1b1c_A) 0.9846 0.8994 3.2485 ( 1 20 45) 0 0.9992 0.9086 10 11 ( 1042 1e5d_A) ( 428 1bmt_A) 0.7341 0.7006 4.0401 ( 2 17 36) 0 0.9646 0.8865 10 11 ( 1042 1e5d_A) ( 477 1bvy_F) 0.8996 0.9994 3.5404 ( 0 16 36) 0 0.8996 0.9994 10 9 ( 1042 1e5d_A) ( 523 1c4k_A) 0.6998 0.8743 4.3125 ( 0 4 21) 0 0.6998 0.8743 10 8 ( 1042 1e5d_A) ( 562 1ccw_A) 0.7341 0.7341 4.0225 ( 2 17 36) 0 0.8683 0.8683 10 10 ( 1042 1e5d_A) ( 745 1d4a_A) 0.7567 0.5735 3.2252 ( 2 18 36) 0 0.8956 0.6451 10 15 ( 1042 1e5d_A) ( 786 1dbw_A) 0.8181 0.8181 4.1027 ( 2 19 45) 0 0.9872 0.9872 10 10 ( 1042 1e5d_A) ( 793 1dcf_A) 0.8179 0.8179 4.5118 ( 2 19 45) 0 0.9671 0.9671 10 10 ( 1042 1e5d_A) ( 971 1dxy ) 0.7993 0.8878 4.8161 ( 0 9 28) 0 0.7993 0.8878 10 9 ( 1042 1e5d_A) ( 980 1dz3_A) 0.6796 0.6796 4.0263 ( 2 15 36) 0 0.8925 0.8925 10 10 ( 1042 1e5d_A) ( 1042 1e5d_A) 1.0000 1.0000 0.0000 ( 0 22 45) 0 1.0000 1.0000 10 10 ( 1042 1e5d_A) ( 1177 1eiw_A) 0.8980 0.9966 5.4889 ( 0 15 36) 0 0.8980 0.9966 10 9 ( 1042 1e5d_A) ( 1252 1es9_A) 0.8527 0.7297 5.8081 ( 1 13 36) 0 0.9772 0.8239 10 12 ( 1042 1e5d_A) ( 1253 1esc ) 0.6989 0.4117 6.4745 ( 0 10 21) 0 0.7471 0.5064 10 17 ( 1042 1e5d_A) ( 1266 1euc_B) 0.6999 0.5833 3.5987 ( 0 8 21) 0 0.8977 0.7491 10 12 ( 1042 1e5d_A) ( 1379 1f2v_A) 0.6995 0.5662 5.8115 ( 2 15 45) 0 0.8966 0.5662 10 16 ( 1042 1e5d_A) ( 1397 1f4p_A) 0.9000 0.9999 2.1430 ( 0 15 36) 0 0.9000 0.9999 10 9 ( 1042 1e5d_A) ( 1443 1f8y_A) 0.8185 0.7640 6.0757 ( 1 11 36) 0 0.8185 0.7640 10 11 ( 1042 1e5d_A) ( 1516 1fjg_B) 0.6996 0.5832 5.0764 ( 0 4 21) 0 0.6996 0.5832 10 12 ( 1042 1e5d_A) ( 1547 1flc_A) 0.6996 0.3889 4.9339 ( 0 6 21) 0 0.6996 0.3889 10 18 ( 1042 1e5d_A) ( 1659 1fye_A) 0.4999 0.2778 4.5671 ( 0 6 10) 0 0.7984 0.4779 10 18 ( 1042 1e5d_A) ( 1662 1fyx_A) 0.6237 0.6237 3.8010 ( 2 14 28) 0 0.7787 0.7787 10 10 ( 1042 1e5d_A) ( 1700 1g2i_A) 0.7732 0.5661 4.6280 ( 1 13 28) 0 0.7732 0.5661 10 14 ( 1042 1e5d_A) ( 1803 1gdh_A) 0.6000 0.6000 3.4270 ( 0 4 15) 0 0.9946 0.9946 10 10 ( 1042 1e5d_A) ( 1901 1gpm_A) 0.8768 0.6095 4.9159 ( 2 22 45) 0 0.8768 0.6095 10 16 ( 1042 1e5d_A) ( 2027 1h05_A) 0.7998 0.7271 3.6651 ( 0 5 28) 0 0.8986 0.8173 10 11 ( 1042 1e5d_A) ( 2427 1i7q_B) 0.8602 0.5451 3.9970 ( 2 21 45) 0 0.8988 0.5451 10 18 ( 1042 1e5d_A) ( 2470 1iex_A) 0.9980 0.8325 4.7984 ( 0 15 45) 0 0.9980 0.8325 10 12 ( 1042 1e5d_A) ( 2714 1j2y_A) 0.8991 0.8176 4.4440 ( 0 12 36) 0 0.8993 0.8177 10 11 ( 1042 1e5d_A) ( 2729 1j4a_A) 0.8641 0.8641 4.9312 ( 1 14 36) 0 0.9702 0.9702 10 10 ( 1042 1e5d_A) ( 2809 1jbe_A) 0.7649 0.7649 4.2392 ( 2 17 45) 0 0.9474 0.9474 10 10 ( 1042 1e5d_A) ( 3034 1jrl_A) 0.8966 0.8966 6.2327 ( 0 12 36) 0 0.8966 0.8966 10 10 ( 1042 1e5d_A) ( 3073 1jvn_A) 0.7996 0.4210 4.2054 ( 0 10 28) 0 0.7996 0.4601 10 19 ( 1042 1e5d_A) ( 3189 1k66_A) 0.7649 0.7372 4.4627 ( 2 17 45) 0 0.9896 0.9026 10 11 ( 1042 1e5d_A) ( 3190 1k68_A) 0.7649 0.7649 4.5033 ( 2 17 45) 0 0.9885 0.9885 10 10 ( 1042 1e5d_A) ( 3199 1k7c_A) 0.6459 0.4583 7.8043 ( 1 9 21) 0 0.8684 0.5955 10 15 ( 1042 1e5d_A) ( 3234 1k9v_F) 0.7079 0.4825 5.7255 ( 2 16 36) 0 0.7079 0.4825 10 18 ( 1042 1e5d_A) ( 3238 1ka9_H) 0.7995 0.5000 4.4099 ( 0 10 28) 0 0.7996 0.5000 10 16 ( 1042 1e5d_A) ( 3295 1kgs_A) 0.6994 0.6994 5.6197 ( 0 6 21) 0 0.8995 0.8995 10 10 ( 1042 1e5d_A) ( 3412 1krw_A) 0.5996 0.5996 5.8734 ( 0 7 15) 0 0.8976 0.8976 10 10 ( 1042 1e5d_A) ( 3462 1kwg_A) 0.8981 0.5623 5.3896 ( 0 12 36) 0 0.8982 0.5623 10 16 ( 1042 1e5d_A) ( 3560 1l7d_A) 0.8955 0.5291 6.7164 ( 0 13 36) 0 0.9892 0.5875 10 17 ( 1042 1e5d_A) ( 3581 1l9x_A) 0.9971 0.4347 5.2693 ( 0 21 45) 0 0.9971 0.4347 10 23 ( 1042 1e5d_A) ( 3632 1li4_A) 0.8578 0.5449 6.3109 ( 2 21 45) 0 0.9772 0.5543 10 18 ( 1042 1e5d_A) ( 3801 1m2e_A) 0.6794 0.6998 4.8691 ( 2 15 36) 0 0.8952 0.9919 10 9 ( 1042 1e5d_A) ( 3896 1mb3_A) 0.8404 0.8404 4.2766 ( 2 20 45) 0 0.9907 0.9907 10 10 ( 1042 1e5d_A) ( 4066 1mx3_A) 0.4999 0.4545 5.4248 ( 0 3 10) 0 0.8939 0.8143 10 11 ( 1042 1e5d_A) ( 4130 1n57_A) 0.8642 0.4979 4.7864 ( 1 14 36) 0 0.8642 0.5326 10 18 ( 1042 1e5d_A) ( 4185 1nat ) 0.9641 0.9641 4.2072 ( 1 16 45) 0 0.9641 0.9641 10 10 ( 1042 1e5d_A) ( 4323 1nni_1) 0.8787 0.8047 2.6742 ( 1 16 36) 0 0.8787 0.8047 10 11 ( 1042 1e5d_A) ( 4433 1ny5_A) 0.9537 0.9537 5.2191 ( 1 15 45) 0 0.9537 0.9537 10 10 ( 1042 1e5d_A) ( 4474 1o1y_A) 0.8637 0.4721 5.3225 ( 1 14 36) 0 0.8637 0.4721 10 19 ( 1042 1e5d_A) ( 4590 1obo_A) 0.9993 0.9993 3.6212 ( 0 22 45) 0 0.9993 0.9993 10 10 ( 1042 1e5d_A) ( 4669 1oi7_A) 0.7646 0.7045 3.3480 ( 1 12 28) 0 0.7994 0.7269 10 11 ( 1042 1e5d_A) ( 4787 1ou0_A) 0.6627 0.5314 6.0124 ( 2 14 45) 0 0.8182 0.5314 10 17 ( 1042 1e5d_A) ( 4813 1oxb_B) 0.8181 0.8181 4.2302 ( 2 19 45) 0 0.9904 0.9904 10 10 ( 1042 1e5d_A) ( 4871 1p2f_A) 0.9545 0.9545 4.6992 ( 1 15 45) 0 0.9852 0.9852 10 10 ( 1042 1e5d_A) ( 4905 1p5f_A) 0.9751 0.7094 5.1720 ( 1 18 45) 0 0.9751 0.7094 10 14 ( 1042 1e5d_A) ( 4916 1p6u_A) 0.6119 0.6119 4.4552 ( 2 13 36) 0 0.7987 0.7987 10 10 ( 1042 1e5d_A) ( 4926 1p80_A) 0.8987 0.6919 4.9523 ( 0 16 36) 0 0.8987 0.6919 10 13 ( 1042 1e5d_A) ( 5096 1psd_A) 0.8983 0.9972 5.2193 ( 0 8 36) 0 0.8983 0.9972 10 9 ( 1042 1e5d_A) ( 5234 1q7r_A) 0.9957 0.5553 5.8113 ( 0 20 45) 0 0.9957 0.5553 10 18 ( 1042 1e5d_A) ( 5289 1qcz_A) 0.7998 0.7998 3.6326 ( 0 11 28) 0 0.7998 0.7998 10 10 ( 1042 1e5d_A) ( 5297 1qdl_B) 0.8782 0.5278 4.1274 ( 1 16 36) 0 0.8979 0.5293 10 17 ( 1042 1e5d_A) ( 5364 1qkk_A) 0.7640 0.7640 6.0318 ( 2 17 45) 0 0.9642 0.9642 10 10 ( 1042 1e5d_A) ( 5397 1qo0_D) 0.8847 0.7437 9.1822 ( 0 14 36) 0 0.8847 0.7437 10 12 ( 1042 1e5d_A) ( 5470 1qvz_A) 0.5000 0.3125 4.2246 ( 0 4 10) 0 0.8517 0.5573 10 16 ( 1042 1e5d_A) ( 5673 1rli_A) 0.6880 0.6519 4.4924 ( 3 22 45) 0 0.9920 0.8301 10 12 ( 1042 1e5d_A) ( 5752 1s2d_A) 0.6630 0.7190 5.0161 ( 1 10 21) 0 0.6965 0.7719 10 9 ( 1042 1e5d_A) ( 5785 1say_A) 0.7972 0.4209 6.8756 ( 0 14 28) 0 0.8962 0.4735 10 19 ( 1042 1e5d_A) ( 5842 1sqs_A) 0.8648 0.6358 3.9392 ( 1 14 36) 0 0.8924 0.6414 10 14 ( 1042 1e5d_A) ( 5920 1tmy ) 0.8181 0.8181 4.0894 ( 2 19 45) 0 0.9891 0.9891 10 10 ( 1042 1e5d_A) ( 6242 1vhq_A) 0.8981 0.6425 5.3978 ( 0 15 36) 0 0.8981 0.6425 10 14 ( 1042 1e5d_A) ( 6258 1vi6_A) 0.7993 0.6152 4.8353 ( 0 10 28) 0 0.7993 0.6152 10 13 ( 1042 1e5d_A) ( 6283 1vjg_A) 0.8937 0.7474 7.3128 ( 0 14 36) 0 0.8937 0.7474 10 12 ( 1042 1e5d_A) ( 6496 2nac_A) 0.7923 0.6570 5.5033 ( 1 10 36) 0 0.7985 0.6570 10 13 ( 1042 1e5d_A) ( 6624 5nul ) 0.8778 0.8778 2.8401 ( 2 22 45) 0 0.8778 0.8778 10 10 ( 1042 1e5d_A) ( 6640 7req_A) 0.8770 0.7755 4.7181 ( 2 22 45) 0 0.9673 0.8196 10 12 ( 1042 1e5d_A) ( 6642 7req_B) 0.7926 0.6909 5.0085 ( 2 18 45) 0 0.9599 0.7577 10 13 -------------------------------------------------------------------------------------------------------------------------