------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 1177 1eiw_A) ( 6 1a04_A) 0.5555 0.4545 4.1884 ( 0 3 10) 0 0.7930 0.7181 9 11 ( 1177 1eiw_A) ( 26 1a2o_A) 0.8887 0.7999 3.0000 ( 0 15 28) 0 0.8887 0.7999 9 10 ( 1177 1eiw_A) ( 90 1a9x_B) 0.8726 0.4439 3.7278 ( 1 17 28) 0 0.8726 0.4439 9 18 ( 1177 1eiw_A) ( 256 1b00_A) 0.7051 0.6726 3.4968 ( 2 16 28) 0 0.7925 0.7561 9 10 ( 1177 1eiw_A) ( 266 1b1c_A) 0.9619 0.8035 5.6429 ( 1 16 36) 0 0.9619 0.8035 9 11 ( 1177 1eiw_A) ( 428 1bmt_A) 0.7777 0.6363 2.9067 ( 0 12 21) 0 0.7928 0.7180 9 11 ( 1177 1eiw_A) ( 477 1bvy_F) 0.9789 0.9789 5.3411 ( 1 19 36) 0 0.9789 0.9789 9 9 ( 1177 1eiw_A) ( 523 1c4k_A) 0.4882 0.4925 3.4209 ( 3 15 28) 0 0.7770 0.8736 9 8 ( 1177 1eiw_A) ( 562 1ccw_A) 0.5554 0.4999 5.2922 ( 0 4 10) 0 0.6959 0.6473 9 10 ( 1177 1eiw_A) ( 745 1d4a_A) 0.6100 0.4856 6.0704 ( 2 13 28) 0 0.8527 0.5303 9 15 ( 1177 1eiw_A) ( 786 1dbw_A) 0.7932 0.7567 3.1918 ( 2 18 36) 0 0.9807 0.8884 9 10 ( 1177 1eiw_A) ( 793 1dcf_A) 0.5555 0.5000 2.6618 ( 0 5 10) 0 0.6658 0.5995 9 10 ( 1177 1eiw_A) ( 971 1dxy ) 0.8631 0.8631 3.5546 ( 1 15 28) 0 0.8631 0.8631 9 9 ( 1177 1eiw_A) ( 980 1dz3_A) 0.6104 0.5938 3.0425 ( 2 13 28) 0 0.8876 0.7993 9 10 ( 1177 1eiw_A) ( 1042 1e5d_A) 0.9966 0.8980 5.4889 ( 0 15 36) 0 0.9966 0.8980 9 10 ( 1177 1eiw_A) ( 1177 1eiw_A) 1.0000 1.0000 0.0000 ( 0 27 36) 0 1.0000 1.0000 9 9 ( 1177 1eiw_A) ( 1252 1es9_A) 0.8447 0.6552 5.3731 ( 1 13 28) 0 0.8447 0.6997 9 12 ( 1177 1eiw_A) ( 1253 1esc ) 0.6362 0.4866 7.2752 ( 3 20 36) 0 0.8260 0.4866 9 17 ( 1177 1eiw_A) ( 1266 1euc_B) 0.7339 0.6499 4.2770 ( 2 16 36) 0 0.7867 0.6499 9 12 ( 1177 1eiw_A) ( 1379 1f2v_A) 0.6452 0.4719 3.7342 ( 2 14 28) 0 0.8454 0.4973 9 16 ( 1177 1eiw_A) ( 1397 1f4p_A) 0.9967 0.9967 5.4311 ( 0 15 36) 0 0.9967 0.9967 9 9 ( 1177 1eiw_A) ( 1443 1f8y_A) 0.7194 0.6126 2.4433 ( 1 10 21) 0 0.7194 0.6126 9 11 ( 1177 1eiw_A) ( 1516 1fjg_B) 0.7773 0.5832 4.5834 ( 0 6 21) 0 0.7773 0.5832 9 12 ( 1177 1eiw_A) ( 1547 1flc_A) 0.8879 0.4444 4.6136 ( 0 11 28) 0 0.8879 0.4444 9 18 ( 1177 1eiw_A) ( 1659 1fye_A) 0.6666 0.3333 3.8626 ( 0 8 15) 0 0.8884 0.4444 9 18 ( 1177 1eiw_A) ( 1662 1fyx_A) 0.7771 0.6996 5.0158 ( 0 12 21) 0 0.8555 0.7796 9 10 ( 1177 1eiw_A) ( 1700 1g2i_A) 0.5453 0.4784 4.5044 ( 3 17 28) 0 0.7460 0.4962 9 14 ( 1177 1eiw_A) ( 1803 1gdh_A) 0.7336 0.7081 5.2313 ( 2 16 36) 0 0.7336 0.7081 9 10 ( 1177 1eiw_A) ( 1901 1gpm_A) 0.8755 0.4992 4.2051 ( 1 18 28) 0 0.8755 0.4992 9 16 ( 1177 1eiw_A) ( 2027 1h05_A) 0.8129 0.6959 4.3794 ( 1 11 28) 0 0.8132 0.6961 9 11 ( 1177 1eiw_A) ( 2427 1i7q_B) 0.8723 0.4439 4.4287 ( 1 17 28) 0 0.8723 0.4439 9 18 ( 1177 1eiw_A) ( 2470 1iex_A) 0.5529 0.5280 4.4004 ( 3 17 36) 0 0.6657 0.5283 9 12 ( 1177 1eiw_A) ( 2714 1j2y_A) 0.5555 0.4545 3.8637 ( 0 2 10) 0 0.7541 0.6273 9 11 ( 1177 1eiw_A) ( 2729 1j4a_A) 0.6228 0.5726 7.9708 ( 1 9 15) 0 0.8675 0.7871 9 10 ( 1177 1eiw_A) ( 2809 1jbe_A) 0.5554 0.4999 4.8428 ( 0 4 10) 0 0.6659 0.5996 9 10 ( 1177 1eiw_A) ( 3034 1jrl_A) 0.6100 0.5935 5.8831 ( 2 13 28) 0 0.7760 0.6990 9 10 ( 1177 1eiw_A) ( 3073 1jvn_A) 0.9883 0.4734 5.3406 ( 1 23 36) 0 0.9883 0.4734 9 19 ( 1177 1eiw_A) ( 3189 1k66_A) 0.7650 0.7006 3.9242 ( 2 17 36) 0 0.9702 0.8068 9 11 ( 1177 1eiw_A) ( 3190 1k68_A) 0.7651 0.7342 3.4709 ( 2 17 36) 0 0.9702 0.8820 9 10 ( 1177 1eiw_A) ( 3199 1k7c_A) 0.6450 0.4959 5.1774 ( 2 14 28) 0 0.7769 0.4959 9 15 ( 1177 1eiw_A) ( 3234 1k9v_F) 0.8725 0.4439 3.9835 ( 1 17 28) 0 0.8725 0.4439 9 18 ( 1177 1eiw_A) ( 3238 1ka9_H) 0.8756 0.4992 4.0263 ( 1 18 28) 0 0.8756 0.4992 9 16 ( 1177 1eiw_A) ( 3295 1kgs_A) 0.6104 0.5938 3.2306 ( 2 13 28) 0 0.9977 0.8987 9 10 ( 1177 1eiw_A) ( 3412 1krw_A) 0.5819 0.5735 4.0789 ( 3 18 36) 0 0.7767 0.6993 9 10 ( 1177 1eiw_A) ( 3462 1kwg_A) 0.9995 0.5625 3.3967 ( 0 17 36) 0 0.9995 0.5625 9 16 ( 1177 1eiw_A) ( 3560 1l7d_A) 0.6242 0.3509 3.4820 ( 1 9 15) 0 0.8593 0.5211 9 17 ( 1177 1eiw_A) ( 3581 1l9x_A) 0.9051 0.3902 4.7639 ( 2 24 36) 0 0.9609 0.3909 9 23 ( 1177 1eiw_A) ( 3632 1li4_A) 0.6099 0.4606 5.2051 ( 3 19 36) 0 0.8126 0.4606 9 18 ( 1177 1eiw_A) ( 3801 1m2e_A) 0.5555 0.5555 4.1808 ( 0 5 10) 0 0.6371 0.6371 9 9 ( 1177 1eiw_A) ( 3896 1mb3_A) 0.5820 0.5735 3.1017 ( 3 18 36) 0 0.9705 0.8822 9 10 ( 1177 1eiw_A) ( 4066 1mx3_A) 0.5555 0.4545 4.4673 ( 0 1 10) 0 0.8863 0.7263 9 11 ( 1177 1eiw_A) ( 4130 1n57_A) 0.8678 0.4437 4.8964 ( 1 16 28) 0 0.8678 0.4907 9 18 ( 1177 1eiw_A) ( 4185 1nat ) 0.9555 0.8727 3.4936 ( 1 15 36) 0 0.9555 0.8727 9 10 ( 1177 1eiw_A) ( 4323 1nni_1) 0.8311 0.7041 5.3288 ( 1 12 28) 0 0.8311 0.7041 9 11 ( 1177 1eiw_A) ( 4433 1ny5_A) 0.9410 0.8634 5.6140 ( 1 14 36) 0 0.9501 0.8692 9 10 ( 1177 1eiw_A) ( 4474 1o1y_A) 0.8683 0.4205 4.2402 ( 1 16 28) 0 0.8683 0.4205 9 19 ( 1177 1eiw_A) ( 4590 1obo_A) 0.8870 0.7989 5.4590 ( 0 14 28) 0 0.8870 0.7989 9 10 ( 1177 1eiw_A) ( 4669 1oi7_A) 0.7870 0.6836 4.2389 ( 1 10 28) 0 0.7870 0.6836 9 11 ( 1177 1eiw_A) ( 4787 1ou0_A) 0.5555 0.2941 4.2330 ( 0 5 10) 0 0.8454 0.4686 9 17 ( 1177 1eiw_A) ( 4813 1oxb_B) 0.5553 0.4998 6.0905 ( 0 5 10) 0 0.7926 0.7562 9 10 ( 1177 1eiw_A) ( 4871 1p2f_A) 0.5529 0.5463 3.1952 ( 3 17 36) 0 0.6657 0.5994 9 10 ( 1177 1eiw_A) ( 4905 1p5f_A) 0.8628 0.5684 4.3592 ( 1 15 28) 0 0.8867 0.6177 9 14 ( 1177 1eiw_A) ( 4916 1p6u_A) 0.6103 0.5937 4.1935 ( 2 13 28) 0 0.6103 0.5937 9 10 ( 1177 1eiw_A) ( 4926 1p80_A) 0.8771 0.6673 4.5272 ( 2 22 36) 0 0.8771 0.6673 9 13 ( 1177 1eiw_A) ( 5096 1psd_A) 0.5553 0.5553 5.7023 ( 0 0 10) 0 0.5555 0.5555 9 9 ( 1177 1eiw_A) ( 5234 1q7r_A) 0.8881 0.4444 4.3883 ( 0 18 28) 0 0.8881 0.4667 9 18 ( 1177 1eiw_A) ( 5289 1qcz_A) 0.5723 0.5601 4.5822 ( 2 12 28) 0 0.8874 0.7991 9 10 ( 1177 1eiw_A) ( 5297 1qdl_B) 0.8879 0.4705 4.6055 ( 0 14 28) 0 0.9745 0.5283 9 17 ( 1177 1eiw_A) ( 5364 1qkk_A) 0.7640 0.7332 6.0079 ( 2 17 36) 0 0.9656 0.8791 9 10 ( 1177 1eiw_A) ( 5397 1qo0_D) 0.6078 0.5698 9.2791 ( 3 19 36) 0 0.6078 0.5698 9 12 ( 1177 1eiw_A) ( 5470 1qvz_A) 0.8882 0.5000 4.1903 ( 0 15 28) 0 0.9950 0.5622 9 16 ( 1177 1eiw_A) ( 5673 1rli_A) 0.8871 0.6662 5.3839 ( 0 12 28) 0 0.8871 0.6662 9 12 ( 1177 1eiw_A) ( 5752 1s2d_A) 0.8458 0.8458 3.3384 ( 1 13 28) 0 0.8458 0.8458 9 9 ( 1177 1eiw_A) ( 5785 1say_A) 0.9985 0.4736 4.4264 ( 0 15 36) 0 0.9985 0.4736 9 19 ( 1177 1eiw_A) ( 5842 1sqs_A) 0.9260 0.6333 5.0338 ( 1 13 36) 0 0.9260 0.6333 9 14 ( 1177 1eiw_A) ( 5920 1tmy ) 0.8184 0.7763 3.1456 ( 2 19 36) 0 0.8184 0.7763 9 10 ( 1177 1eiw_A) ( 6242 1vhq_A) 0.8723 0.5695 4.3975 ( 1 17 28) 0 0.8723 0.5695 9 14 ( 1177 1eiw_A) ( 6258 1vi6_A) 0.5555 0.3846 4.6173 ( 0 3 10) 0 0.7770 0.5708 9 13 ( 1177 1eiw_A) ( 6283 1vjg_A) 0.6645 0.4995 8.1466 ( 0 3 15) 0 0.7864 0.6370 9 12 ( 1177 1eiw_A) ( 6496 2nac_A) 0.6234 0.4537 6.9502 ( 1 9 15) 0 0.7354 0.5310 9 13 ( 1177 1eiw_A) ( 6624 5nul ) 0.9959 0.8975 5.7580 ( 0 15 36) 0 0.9959 0.8975 9 10 ( 1177 1eiw_A) ( 6640 7req_A) 0.4444 0.3333 5.6729 ( 0 1 6) 0 0.7299 0.6151 9 12 ( 1177 1eiw_A) ( 6642 7req_B) 0.7514 0.5855 5.0941 ( 2 18 28) 0 0.7514 0.5855 9 13 -------------------------------------------------------------------------------------------------------------------------