------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 1397 1f4p_A) ( 6 1a04_A) 0.7650 0.7006 4.0374 ( 2 17 36) 0 0.9990 0.8178 9 11 ( 1397 1f4p_A) ( 26 1a2o_A) 0.8883 0.7996 4.1123 ( 0 14 28) 0 0.9019 0.8372 9 10 ( 1397 1f4p_A) ( 90 1a9x_B) 0.9977 0.4999 4.9656 ( 0 15 36) 0 0.9977 0.4999 9 18 ( 1397 1f4p_A) ( 256 1b00_A) 0.8878 0.7994 4.7507 ( 0 14 28) 0 0.9989 0.8994 9 10 ( 1397 1f4p_A) ( 266 1b1c_A) 0.9999 0.8182 2.0027 ( 0 14 36) 0 0.9999 0.8182 9 11 ( 1397 1f4p_A) ( 428 1bmt_A) 0.6658 0.5451 6.5182 ( 0 6 15) 0 0.9978 0.8174 9 11 ( 1397 1f4p_A) ( 477 1bvy_F) 0.9997 0.9997 2.8797 ( 0 16 36) 0 0.9997 0.9997 9 9 ( 1397 1f4p_A) ( 523 1c4k_A) 0.7771 0.8738 4.9967 ( 0 5 21) 0 0.7771 0.8738 9 8 ( 1397 1f4p_A) ( 562 1ccw_A) 0.7776 0.6999 3.3463 ( 0 10 21) 0 0.7863 0.7334 9 10 ( 1397 1f4p_A) ( 745 1d4a_A) 0.7651 0.5676 3.8004 ( 2 17 36) 0 0.9918 0.5993 9 15 ( 1397 1f4p_A) ( 786 1dbw_A) 0.8884 0.7997 3.9539 ( 0 13 28) 0 0.9989 0.8993 9 10 ( 1397 1f4p_A) ( 793 1dcf_A) 0.8885 0.7997 3.7677 ( 0 14 28) 0 0.9553 0.8726 9 10 ( 1397 1f4p_A) ( 971 1dxy ) 0.7768 0.7768 5.5286 ( 0 8 21) 0 0.8870 0.8870 9 9 ( 1397 1f4p_A) ( 980 1dz3_A) 0.7776 0.6999 3.7084 ( 0 11 21) 0 0.9937 0.8963 9 10 ( 1397 1f4p_A) ( 1042 1e5d_A) 0.9999 0.9000 2.1430 ( 0 15 36) 0 0.9999 0.9000 9 10 ( 1397 1f4p_A) ( 1177 1eiw_A) 0.9967 0.9967 5.4311 ( 0 15 36) 0 0.9967 0.9967 9 9 ( 1397 1f4p_A) ( 1252 1es9_A) 0.7763 0.5830 6.0623 ( 0 9 21) 0 0.9531 0.7379 9 12 ( 1397 1f4p_A) ( 1253 1esc ) 0.4443 0.2353 6.8390 ( 0 0 6) 0 0.8865 0.4705 9 17 ( 1397 1f4p_A) ( 1266 1euc_B) 0.8871 0.6662 5.3812 ( 0 11 28) 0 0.8871 0.6662 9 12 ( 1397 1f4p_A) ( 1379 1f2v_A) 0.6660 0.3750 5.9259 ( 0 7 15) 0 0.9958 0.5623 9 16 ( 1397 1f4p_A) ( 1397 1f4p_A) 1.0000 1.0000 0.0000 ( 0 18 36) 0 1.0000 1.0000 9 9 ( 1397 1f4p_A) ( 1443 1f8y_A) 0.7773 0.6362 4.5753 ( 0 6 21) 0 0.7864 0.6833 9 11 ( 1397 1f4p_A) ( 1516 1fjg_B) 0.7773 0.5832 4.4606 ( 0 4 21) 0 0.7773 0.5832 9 12 ( 1397 1f4p_A) ( 1547 1flc_A) 0.7772 0.3889 4.7759 ( 0 5 21) 0 0.8870 0.4444 9 18 ( 1397 1f4p_A) ( 1659 1fye_A) 0.6666 0.3333 3.8638 ( 0 5 15) 0 0.8877 0.4444 9 18 ( 1397 1f4p_A) ( 1662 1fyx_A) 0.7193 0.6632 3.6463 ( 1 10 21) 0 0.7775 0.6998 9 10 ( 1397 1f4p_A) ( 1700 1g2i_A) 0.9703 0.6394 4.8273 ( 1 17 36) 0 0.9703 0.6394 9 14 ( 1397 1f4p_A) ( 1803 1gdh_A) 0.6650 0.5990 7.6156 ( 0 0 15) 0 0.9959 0.8976 9 10 ( 1397 1f4p_A) ( 1901 1gpm_A) 0.8880 0.5000 4.5161 ( 0 13 28) 0 0.8880 0.5000 9 16 ( 1397 1f4p_A) ( 2027 1h05_A) 0.8884 0.7271 3.9934 ( 0 8 28) 0 0.9981 0.8175 9 11 ( 1397 1f4p_A) ( 2427 1i7q_B) 0.9984 0.5000 4.5217 ( 0 18 36) 0 0.9984 0.5000 9 18 ( 1397 1f4p_A) ( 2470 1iex_A) 0.9987 0.7497 4.3281 ( 0 11 36) 0 0.9987 0.7497 9 12 ( 1397 1f4p_A) ( 2714 1j2y_A) 0.6663 0.5453 5.2656 ( 0 7 15) 0 0.9981 0.8175 9 11 ( 1397 1f4p_A) ( 2729 1j4a_A) 0.6628 0.6471 5.6325 ( 2 14 36) 0 0.9406 0.8631 9 10 ( 1397 1f4p_A) ( 2809 1jbe_A) 0.7000 0.6795 4.3055 ( 2 15 36) 0 0.9427 0.8645 9 10 ( 1397 1f4p_A) ( 3034 1jrl_A) 0.8873 0.7991 5.2125 ( 0 9 28) 0 0.8873 0.7991 9 10 ( 1397 1f4p_A) ( 3073 1jvn_A) 0.8876 0.4210 4.9243 ( 0 13 28) 0 0.8876 0.4288 9 19 ( 1397 1f4p_A) ( 3189 1k66_A) 0.8884 0.7271 3.9214 ( 0 13 28) 0 0.9967 0.8170 9 11 ( 1397 1f4p_A) ( 3190 1k68_A) 0.7340 0.7085 3.8161 ( 2 16 36) 0 0.9962 0.8978 9 10 ( 1397 1f4p_A) ( 3199 1k7c_A) 0.5729 0.3899 7.6749 ( 1 7 15) 0 0.7843 0.5227 9 15 ( 1397 1f4p_A) ( 3234 1k9v_F) 0.8456 0.4429 4.1168 ( 1 13 28) 0 0.8868 0.4531 9 18 ( 1397 1f4p_A) ( 3238 1ka9_H) 0.9959 0.5623 5.7408 ( 0 17 36) 0 0.9959 0.5623 9 16 ( 1397 1f4p_A) ( 3295 1kgs_A) 0.6660 0.5996 6.1068 ( 0 7 15) 0 0.9991 0.8995 9 10 ( 1397 1f4p_A) ( 3412 1krw_A) 0.7776 0.6999 3.7758 ( 0 8 21) 0 0.9973 0.8984 9 10 ( 1397 1f4p_A) ( 3462 1kwg_A) 0.9978 0.5624 4.9124 ( 0 14 36) 0 0.9978 0.5624 9 16 ( 1397 1f4p_A) ( 3560 1l7d_A) 0.8865 0.4705 5.8056 ( 0 9 28) 0 0.9963 0.5293 9 17 ( 1397 1f4p_A) ( 3581 1l9x_A) 0.9969 0.3913 5.3653 ( 0 16 36) 0 0.9969 0.3913 9 23 ( 1397 1f4p_A) ( 3632 1li4_A) 0.7646 0.4860 5.0542 ( 2 17 36) 0 0.9977 0.4999 9 18 ( 1397 1f4p_A) ( 3801 1m2e_A) 0.6102 0.6102 5.1968 ( 2 13 28) 0 0.9536 0.9536 9 9 ( 1397 1f4p_A) ( 3896 1mb3_A) 0.7650 0.7341 4.0207 ( 2 17 36) 0 0.9989 0.8994 9 10 ( 1397 1f4p_A) ( 4066 1mx3_A) 0.8872 0.7266 5.3410 ( 0 7 28) 0 0.8872 0.7642 9 11 ( 1397 1f4p_A) ( 4130 1n57_A) 0.8884 0.4444 3.9467 ( 0 12 28) 0 0.8884 0.4444 9 18 ( 1397 1f4p_A) ( 4185 1nat ) 0.9554 0.8726 3.6748 ( 1 15 36) 0 0.9990 0.8994 9 10 ( 1397 1f4p_A) ( 4323 1nni_1) 0.8887 0.7272 2.9306 ( 0 13 28) 0 0.9195 0.7852 9 11 ( 1397 1f4p_A) ( 4433 1ny5_A) 0.9508 0.8697 6.4393 ( 1 15 36) 0 0.9948 0.8969 9 10 ( 1397 1f4p_A) ( 4474 1o1y_A) 0.9543 0.4725 4.8106 ( 1 15 36) 0 0.9543 0.4725 9 19 ( 1397 1f4p_A) ( 4590 1obo_A) 0.9998 0.8999 2.8276 ( 0 18 36) 0 0.9998 0.8999 9 10 ( 1397 1f4p_A) ( 4669 1oi7_A) 0.6665 0.5454 4.3190 ( 0 5 15) 0 0.8872 0.7267 9 11 ( 1397 1f4p_A) ( 4787 1ou0_A) 0.6659 0.3529 6.3172 ( 0 7 15) 0 0.8742 0.5223 9 17 ( 1397 1f4p_A) ( 4813 1oxb_B) 0.8884 0.7997 3.8381 ( 0 14 28) 0 0.9641 0.8781 9 10 ( 1397 1f4p_A) ( 4871 1p2f_A) 0.9552 0.8725 3.9541 ( 1 15 36) 0 0.9552 0.8725 9 10 ( 1397 1f4p_A) ( 4905 1p5f_A) 0.9634 0.6385 4.8096 ( 1 16 36) 0 0.9634 0.6385 9 14 ( 1397 1f4p_A) ( 4916 1p6u_A) 0.7775 0.6998 4.0408 ( 0 9 21) 0 0.8850 0.7977 9 10 ( 1397 1f4p_A) ( 4926 1p80_A) 0.9977 0.6919 4.9680 ( 0 17 36) 0 0.9977 0.6919 9 13 ( 1397 1f4p_A) ( 5096 1psd_A) 0.7772 0.7772 4.8147 ( 0 3 21) 0 0.8872 0.8872 9 9 ( 1397 1f4p_A) ( 5234 1q7r_A) 0.9927 0.4998 6.6487 ( 0 16 36) 0 0.9927 0.4998 9 18 ( 1397 1f4p_A) ( 5289 1qcz_A) 0.7775 0.6998 4.0152 ( 0 9 21) 0 0.8884 0.7997 9 10 ( 1397 1f4p_A) ( 5297 1qdl_B) 0.9974 0.5293 5.1254 ( 0 14 36) 0 0.9974 0.5293 9 17 ( 1397 1f4p_A) ( 5364 1qkk_A) 0.7623 0.7318 7.4255 ( 2 17 36) 0 0.9492 0.8687 9 10 ( 1397 1f4p_A) ( 5397 1qo0_D) 0.9615 0.7402 10.2757 ( 0 14 36) 0 0.9615 0.7402 9 12 ( 1397 1f4p_A) ( 5470 1qvz_A) 0.8883 0.5000 4.0625 ( 0 13 28) 0 0.9381 0.5585 9 16 ( 1397 1f4p_A) ( 5673 1rli_A) 0.8885 0.6666 3.7710 ( 0 13 28) 0 0.9962 0.7491 9 12 ( 1397 1f4p_A) ( 5752 1s2d_A) 0.6663 0.6663 5.1646 ( 0 7 15) 0 0.7866 0.7866 9 9 ( 1397 1f4p_A) ( 5785 1say_A) 0.9972 0.4736 5.2286 ( 0 11 36) 0 0.9972 0.4736 9 19 ( 1397 1f4p_A) ( 5842 1sqs_A) 0.9555 0.6375 3.5201 ( 1 15 36) 0 0.9555 0.6375 9 14 ( 1397 1f4p_A) ( 5920 1tmy ) 0.8886 0.7998 3.4906 ( 0 14 28) 0 0.9551 0.8725 9 10 ( 1397 1f4p_A) ( 6242 1vhq_A) 0.9975 0.6426 5.0838 ( 0 16 36) 0 0.9975 0.6426 9 14 ( 1397 1f4p_A) ( 6258 1vi6_A) 0.8882 0.6153 4.2100 ( 0 9 28) 0 0.8882 0.6153 9 13 ( 1397 1f4p_A) ( 6283 1vjg_A) 0.8864 0.6661 5.8898 ( 0 11 28) 0 0.8864 0.6661 9 12 ( 1397 1f4p_A) ( 6496 2nac_A) 0.8864 0.6150 5.8365 ( 0 7 28) 0 0.9941 0.6914 9 13 ( 1397 1f4p_A) ( 6624 5nul ) 0.9999 0.9000 2.0223 ( 0 16 36) 0 0.9999 0.9000 9 10 ( 1397 1f4p_A) ( 6640 7req_A) 0.8880 0.6665 4.5569 ( 0 13 28) 0 0.8883 0.6665 9 12 ( 1397 1f4p_A) ( 6642 7req_B) 0.6653 0.4613 7.2669 ( 0 7 15) 0 0.8880 0.6152 9 13 -------------------------------------------------------------------------------------------------------------------------