------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 1547 1flc_A) ( 6 1a04_A) 0.4415 0.6959 4.5272 ( 1 11 28) 0 0.4444 0.7269 18 11 ( 1547 1flc_A) ( 26 1a2o_A) 0.4444 0.7994 4.5957 ( 0 10 28) 0 0.4444 0.7994 18 10 ( 1547 1flc_A) ( 90 1a9x_B) 0.2222 0.2222 5.6141 ( 0 2 6) 0 0.4433 0.4433 18 18 ( 1547 1flc_A) ( 256 1b00_A) 0.4444 0.7988 5.6155 ( 0 11 28) 0 0.4444 0.7991 18 10 ( 1547 1flc_A) ( 266 1b1c_A) 0.2222 0.3636 5.3981 ( 0 2 6) 0 0.4442 0.7248 18 11 ( 1547 1flc_A) ( 428 1bmt_A) 0.4415 0.6960 3.9695 ( 1 11 28) 0 0.4444 0.7266 18 11 ( 1547 1flc_A) ( 477 1bvy_F) 0.3801 0.6167 5.5336 ( 1 7 21) 0 0.4414 0.8116 18 9 ( 1547 1flc_A) ( 523 1c4k_A) 0.3333 0.7487 6.2198 ( 0 2 15) 0 0.3333 0.7487 18 8 ( 1547 1flc_A) ( 562 1ccw_A) 0.3801 0.5885 4.9520 ( 1 7 21) 0 0.3889 0.6993 18 10 ( 1547 1flc_A) ( 745 1d4a_A) 0.2222 0.2667 5.7131 ( 0 1 6) 0 0.3889 0.4666 18 15 ( 1547 1flc_A) ( 786 1dbw_A) 0.4444 0.7992 5.0128 ( 0 9 28) 0 0.4444 0.7992 18 10 ( 1547 1flc_A) ( 793 1dcf_A) 0.4161 0.5600 4.7256 ( 2 12 28) 0 0.4161 0.6999 18 10 ( 1547 1flc_A) ( 971 1dxy ) 0.3889 0.7776 3.6561 ( 0 9 21) 0 0.4444 0.8872 18 9 ( 1547 1flc_A) ( 980 1dz3_A) 0.4067 0.5229 5.1175 ( 2 11 28) 0 0.4067 0.6998 18 10 ( 1547 1flc_A) ( 1042 1e5d_A) 0.3889 0.6996 4.9339 ( 0 6 21) 0 0.3889 0.6996 18 10 ( 1547 1flc_A) ( 1177 1eiw_A) 0.4444 0.8879 4.6136 ( 0 11 28) 0 0.4444 0.8879 18 9 ( 1547 1flc_A) ( 1252 1es9_A) 0.4779 0.6306 3.6836 ( 2 15 36) 0 0.4907 0.6901 18 12 ( 1547 1flc_A) ( 1253 1esc ) 0.2222 0.2353 6.0577 ( 0 3 6) 0 0.3889 0.4117 18 17 ( 1547 1flc_A) ( 1266 1euc_B) 0.4444 0.6665 3.9086 ( 0 10 28) 0 0.4984 0.7382 18 12 ( 1547 1flc_A) ( 1379 1f2v_A) 0.4381 0.4887 3.2003 ( 1 9 28) 0 0.4962 0.5557 18 16 ( 1547 1flc_A) ( 1397 1f4p_A) 0.3889 0.7772 4.7759 ( 0 5 21) 0 0.4444 0.8870 18 9 ( 1547 1flc_A) ( 1443 1f8y_A) 0.3186 0.4375 4.5903 ( 1 5 15) 0 0.3889 0.6362 18 11 ( 1547 1flc_A) ( 1516 1fjg_B) 0.2778 0.4167 3.5576 ( 0 2 10) 0 0.2778 0.4167 18 12 ( 1547 1flc_A) ( 1547 1flc_A) 1.0000 1.0000 0.0000 ( 0 120 153) 0 1.0000 1.0000 18 18 ( 1547 1flc_A) ( 1659 1fye_A) 0.2222 0.2222 4.1473 ( 0 3 6) 0 0.4972 0.4972 18 18 ( 1547 1flc_A) ( 1662 1fyx_A) 0.3333 0.5999 4.1354 ( 0 4 15) 0 0.4444 0.7985 18 10 ( 1547 1flc_A) ( 1700 1g2i_A) 0.3085 0.3317 4.3207 ( 2 7 21) 0 0.4937 0.6218 18 14 ( 1547 1flc_A) ( 1803 1gdh_A) 0.4962 0.8393 4.9097 ( 1 12 36) 0 0.4962 0.8393 18 10 ( 1547 1flc_A) ( 1901 1gpm_A) 0.2910 0.2942 5.1137 ( 6 18 36) 0 0.4924 0.5491 18 16 ( 1547 1flc_A) ( 2027 1h05_A) 0.3889 0.6363 3.9818 ( 0 6 21) 0 0.4444 0.7270 18 11 ( 1547 1flc_A) ( 2427 1i7q_B) 0.2222 0.2222 3.7168 ( 0 2 6) 0 0.4860 0.4860 18 18 ( 1547 1flc_A) ( 2470 1iex_A) 0.2222 0.3333 3.2303 ( 0 0 6) 0 0.4990 0.7425 18 12 ( 1547 1flc_A) ( 2714 1j2y_A) 0.3889 0.6359 5.7684 ( 0 7 21) 0 0.4444 0.7269 18 11 ( 1547 1flc_A) ( 2729 1j4a_A) 0.4067 0.5229 4.2425 ( 2 11 28) 0 0.4444 0.7997 18 10 ( 1547 1flc_A) ( 2809 1jbe_A) 0.4067 0.5228 5.2410 ( 2 11 28) 0 0.4443 0.7979 18 10 ( 1547 1flc_A) ( 3034 1jrl_A) 0.2781 0.2975 6.3828 ( 2 6 21) 0 0.4028 0.6999 18 10 ( 1547 1flc_A) ( 3073 1jvn_A) 0.2222 0.2105 6.0873 ( 0 4 6) 0 0.3912 0.3856 18 19 ( 1547 1flc_A) ( 3189 1k66_A) 0.4444 0.7272 3.5227 ( 0 9 28) 0 0.4444 0.7272 18 11 ( 1547 1flc_A) ( 3190 1k68_A) 0.4948 0.8199 4.3356 ( 1 11 36) 0 0.4948 0.8199 18 10 ( 1547 1flc_A) ( 3199 1k7c_A) 0.4303 0.4678 3.9636 ( 4 21 36) 0 0.4303 0.4678 18 15 ( 1547 1flc_A) ( 3234 1k9v_F) 0.2778 0.2778 7.9130 ( 0 3 10) 0 0.4638 0.4638 18 18 ( 1547 1flc_A) ( 3238 1ka9_H) 0.2222 0.2500 4.9526 ( 0 3 6) 0 0.4987 0.5602 18 16 ( 1547 1flc_A) ( 3295 1kgs_A) 0.4444 0.7986 5.8313 ( 0 7 28) 0 0.4444 0.7993 18 10 ( 1547 1flc_A) ( 3412 1krw_A) 0.4972 0.8534 5.1943 ( 1 13 36) 0 0.4972 0.8534 18 10 ( 1547 1flc_A) ( 3462 1kwg_A) 0.2222 0.2500 4.0424 ( 0 2 6) 0 0.4984 0.5596 18 16 ( 1547 1flc_A) ( 3560 1l7d_A) 0.2778 0.2941 4.9735 ( 0 3 10) 0 0.4667 0.4868 18 17 ( 1547 1flc_A) ( 3581 1l9x_A) 0.4161 0.3386 4.0935 ( 2 12 28) 0 0.4423 0.3472 18 23 ( 1547 1flc_A) ( 3632 1li4_A) 0.4444 0.4444 4.0230 ( 0 10 28) 0 0.4444 0.4444 18 18 ( 1547 1flc_A) ( 3801 1m2e_A) 0.2420 0.2939 6.0251 ( 1 3 10) 0 0.4414 0.8101 18 9 ( 1547 1flc_A) ( 3896 1mb3_A) 0.4402 0.7339 4.2636 ( 1 10 28) 0 0.4444 0.7987 18 10 ( 1547 1flc_A) ( 4066 1mx3_A) 0.4444 0.7270 4.1663 ( 0 10 28) 0 0.4444 0.7270 18 11 ( 1547 1flc_A) ( 4130 1n57_A) 0.2222 0.2222 4.6845 ( 0 3 6) 0 0.4935 0.4935 18 18 ( 1547 1flc_A) ( 4185 1nat ) 0.4444 0.7997 4.0012 ( 0 8 28) 0 0.4444 0.7997 18 10 ( 1547 1flc_A) ( 4323 1nni_1) 0.3889 0.6360 5.3012 ( 0 5 21) 0 0.4428 0.7095 18 11 ( 1547 1flc_A) ( 4433 1ny5_A) 0.4442 0.7948 8.0497 ( 0 8 28) 0 0.4442 0.7953 18 10 ( 1547 1flc_A) ( 4474 1o1y_A) 0.2222 0.2105 3.5436 ( 0 2 6) 0 0.3855 0.3658 18 19 ( 1547 1flc_A) ( 4590 1obo_A) 0.2222 0.3999 6.0352 ( 0 1 6) 0 0.4442 0.7962 18 10 ( 1547 1flc_A) ( 4669 1oi7_A) 0.3889 0.6362 4.3766 ( 0 5 21) 0 0.3889 0.6362 18 11 ( 1547 1flc_A) ( 4787 1ou0_A) 0.4990 0.5281 3.6772 ( 1 17 36) 0 0.4999 0.5293 18 17 ( 1547 1flc_A) ( 4813 1oxb_B) 0.4067 0.5229 4.6963 ( 2 11 28) 0 0.4444 0.7984 18 10 ( 1547 1flc_A) ( 4871 1p2f_A) 0.4380 0.7082 4.9484 ( 1 9 28) 0 0.4444 0.7983 18 10 ( 1547 1flc_A) ( 4905 1p5f_A) 0.3801 0.4719 4.0149 ( 1 7 21) 0 0.4860 0.5988 18 14 ( 1547 1flc_A) ( 4916 1p6u_A) 0.3889 0.6996 4.8677 ( 0 6 21) 0 0.4433 0.7789 18 10 ( 1547 1flc_A) ( 4926 1p80_A) 0.4423 0.6050 4.9577 ( 1 12 28) 0 0.4423 0.6050 18 13 ( 1547 1flc_A) ( 5096 1psd_A) 0.3889 0.7773 4.5679 ( 0 3 21) 0 0.3889 0.7775 18 9 ( 1547 1flc_A) ( 5234 1q7r_A) 0.2222 0.2222 5.1221 ( 0 1 6) 0 0.4778 0.4778 18 18 ( 1547 1flc_A) ( 5289 1qcz_A) 0.3889 0.6996 4.8413 ( 0 6 21) 0 0.3889 0.6997 18 10 ( 1547 1flc_A) ( 5297 1qdl_B) 0.2222 0.2353 3.5446 ( 0 2 6) 0 0.4984 0.5272 18 17 ( 1547 1flc_A) ( 5364 1qkk_A) 0.4441 0.7938 8.4403 ( 0 9 28) 0 0.4441 0.7938 18 10 ( 1547 1flc_A) ( 5397 1qo0_D) 0.4152 0.5259 11.7660 ( 2 12 28) 0 0.4430 0.6559 18 12 ( 1547 1flc_A) ( 5470 1qvz_A) 0.2222 0.2500 10.2669 ( 0 4 6) 0 0.4992 0.5610 18 16 ( 1547 1flc_A) ( 5673 1rli_A) 0.3889 0.5832 4.5896 ( 0 7 21) 0 0.4530 0.5832 18 12 ( 1547 1flc_A) ( 5752 1s2d_A) 0.2222 0.4443 6.6985 ( 0 2 6) 0 0.3889 0.7771 18 9 ( 1547 1flc_A) ( 5785 1say_A) 0.3889 0.3684 4.0951 ( 0 7 21) 0 0.3889 0.3684 18 19 ( 1547 1flc_A) ( 5842 1sqs_A) 0.3119 0.3199 6.3678 ( 4 13 36) 0 0.4443 0.5710 18 14 ( 1547 1flc_A) ( 5920 1tmy ) 0.4444 0.7995 4.4012 ( 0 10 28) 0 0.4444 0.7995 18 10 ( 1547 1flc_A) ( 6242 1vhq_A) 0.4444 0.5713 4.3102 ( 0 12 28) 0 0.4860 0.5987 18 14 ( 1547 1flc_A) ( 6258 1vi6_A) 0.3889 0.5384 3.6625 ( 0 6 21) 0 0.3935 0.5384 18 13 ( 1547 1flc_A) ( 6283 1vjg_A) 0.4066 0.4999 6.3621 ( 2 11 28) 0 0.4066 0.5831 18 12 ( 1547 1flc_A) ( 6496 2nac_A) 0.2222 0.3077 3.8679 ( 0 4 6) 0 0.4533 0.4997 18 13 ( 1547 1flc_A) ( 6624 5nul ) 0.4444 0.7988 5.5167 ( 0 8 28) 0 0.4444 0.7988 18 10 ( 1547 1flc_A) ( 6640 7req_A) 0.3889 0.5831 5.3486 ( 0 8 21) 0 0.4444 0.6661 18 12 ( 1547 1flc_A) ( 6642 7req_B) 0.4066 0.4861 5.4778 ( 2 11 28) 0 0.4444 0.6153 18 13 -------------------------------------------------------------------------------------------------------------------------